RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 CXorf58Q96LI9 332 aa8.83□□□□□ -1
CPNE1-222ENST00000473373 BCL7BQ9BQE9 202 aa8.83□□□□□ -1
CPNE1-222ENST00000473373 PDCD10Q9BUL8 212 aa8.83□□□□□ -1
CPNE1-222ENST00000473373 ZC4H2Q9NQZ6 224 aa8.83□□□□□ -1
CPNE1-222ENST00000473373 CCDC59Q9P031 241 aaKnown RBP8.83□□□□□ -1
CPNE1-222ENST00000473373 MTFP1Q9UDX5 166 aa8.83□□□□□ -1
CPNE1-222ENST00000473373 PRNDQ9UKY0 176 aa8.83□□□□□ -1
CPNE1-222ENST00000473373 C14orf166Q9Y224 244 aaKnown RBP8.83□□□□□ -1
CPNE1-222ENST00000473373 TRBV9A0A0B4J1U6 114 aa8.82□□□□□ -1
CPNE1-222ENST00000473373 DISC1C4P0D8 188 aa8.82□□□□□ -1
CPNE1-222ENST00000473373 BMPR1BO00238 502 aa8.82□□□□□ -1
CPNE1-222ENST00000473373 ATG12O94817 140 aa8.82□□□□□ -1
CPNE1-222ENST00000473373 NDUFB8O95169 186 aa8.82□□□□□ -1
CPNE1-222ENST00000473373 HLA-AP01891 365 aaKnown RBP8.82□□□□□ -1
CPNE1-222ENST00000473373 CTRB1P17538 263 aa8.82□□□□□ -1
CPNE1-222ENST00000473373 PI3P19957 117 aa8.82□□□□□ -1
CPNE1-222ENST00000473373 UCP3P55916 312 aa8.82□□□□□ -1
CPNE1-222ENST00000473373 PIGPP57054 158 aa8.82□□□□□ -1
CPNE1-222ENST00000473373 FAM106AQ4KMX7 169 aa8.82□□□□□ -1
CPNE1-222ENST00000473373 CTRB2Q6GPI1 263 aa8.82□□□□□ -1
CPNE1-222ENST00000473373 STEAP1BQ6NZ63 245 aa8.82□□□□□ -1
CPNE1-222ENST00000473373 HSD17B13Q7Z5P4 300 aaPredicted RBP8.82□□□□□ -1
CPNE1-222ENST00000473373 TMEM229BQ8NBD8 167 aa8.82□□□□□ -1
CPNE1-222ENST00000473373 UBAC2Q8NBM4 344 aa8.82□□□□□ -1
CPNE1-222ENST00000473373 OR10W1Q8NGF6 305 aa8.82□□□□□ -1
CPNE1-222ENST00000473373 LSM10Q969L4 123 aaKnown RBP8.82□□□□□ -1
CPNE1-222ENST00000473373 ZNF486Q96H40 463 aaPredicted RBP8.82□□□□□ -1
CPNE1-222ENST00000473373 ABHD1Q96SE0 405 aa8.82□□□□□ -1
CPNE1-222ENST00000473373 SRSF8Q9BRL6 282 aaKnown RBP8.82□□□□□ -1
CPNE1-222ENST00000473373 RABL2AQ9UBK7 228 aaPredicted RBP8.82□□□□□ -1
CPNE1-222ENST00000473373 RABL2BQ9UNT1 228 aa8.82□□□□□ -1
CPNE1-222ENST00000473373 COL7A1Q02388 2944 aa8.81□□□□□ -1
CPNE1-222ENST00000473373 TRBV7-1A0A0A6YYK4 115 aa8.81□□□□□ -1
CPNE1-222ENST00000473373 TEX50A0A1B0GTY4 177 aa8.81□□□□□ -1
CPNE1-222ENST00000473373 TPPPO94811 219 aa8.81□□□□□ -1
CPNE1-222ENST00000473373 OR2C1O95371 312 aa8.81□□□□□ -1
CPNE1-222ENST00000473373 CRYGCP07315 174 aa8.81□□□□□ -1
CPNE1-222ENST00000473373 NHLRC4P0CG21 123 aaPredicted RBP8.81□□□□□ -1
CPNE1-222ENST00000473373 GPR183P32249 361 aa8.81□□□□□ -1
CPNE1-222ENST00000473373 MEF2DQ14814 521 aa8.81□□□□□ -1
CPNE1-222ENST00000473373 PLET1Q6UQ28 207 aa8.81□□□□□ -1
CPNE1-222ENST00000473373 MCFD2Q8NI22 146 aa8.81□□□□□ -1
CPNE1-222ENST00000473373 MRGPRFQ96AM1 343 aa8.81□□□□□ -1
CPNE1-222ENST00000473373 ISOC1Q96CN7 298 aa8.81□□□□□ -1
CPNE1-222ENST00000473373 MIXL1Q9H2W2 232 aa8.81□□□□□ -1
CPNE1-222ENST00000473373 TUBA4BQ9H853 241 aa8.81□□□□□ -1
CPNE1-222ENST00000473373 LSM4Q9Y4Z0 139 aaKnown RBP8.81□□□□□ -1
CPNE1-222ENST00000473373 DNAH3Q8TD57 4116 aa8.8□□□□□ -1
CPNE1-222ENST00000473373 TEX13DA0A0J9YY54 714 aaPredicted RBP8.8□□□□□ -1
CPNE1-222ENST00000473373 C3orf85A0A1B0GTC6 90 aa8.8□□□□□ -1
CPNE1-222ENST00000473373 A0A1B0GW64 132 aa8.8□□□□□ -1
CPNE1-222ENST00000473373 IGLC7A0M8Q6 106 aa8.8□□□□□ -1
CPNE1-222ENST00000473373 H3BMQ9 156 aa8.8□□□□□ -1
CPNE1-222ENST00000473373 IGLV1-51P01701 117 aa8.8□□□□□ -1
CPNE1-222ENST00000473373 AKAIN1P0CW23 69 aa8.8□□□□□ -1
CPNE1-222ENST00000473373 S100A5P33763 92 aa8.8□□□□□ -1
CPNE1-222ENST00000473373 SSBP1Q04837 148 aaKnown RBP8.8□□□□□ -1
CPNE1-222ENST00000473373 GUCA2BQ16661 112 aa8.8□□□□□ -1
CPNE1-222ENST00000473373 ZNF585BQ52M93 769 aa8.8□□□□□ -1
CPNE1-222ENST00000473373 Q56UQ5 140 aa8.8□□□□□ -1
CPNE1-222ENST00000473373 FAAP20Q6NZ36 180 aa8.8□□□□□ -1
CPNE1-222ENST00000473373 Q8N402 240 aa8.8□□□□□ -1
CPNE1-222ENST00000473373 SLC35G3Q8N808 338 aa8.8□□□□□ -1
CPNE1-222ENST00000473373 GDPD1Q8N9F7 314 aa8.8□□□□□ -1
CPNE1-222ENST00000473373 OR5B3Q8NH48 314 aa8.8□□□□□ -1
CPNE1-222ENST00000473373 MARCH1Q8TCQ1 289 aa8.8□□□□□ -1
CPNE1-222ENST00000473373 DYNC2LI1Q8TCX1 351 aa8.8□□□□□ -1
CPNE1-222ENST00000473373 RRNAD1Q96FB5 475 aaKnown RBP8.8□□□□□ -1
CPNE1-222ENST00000473373 MISP3Q96FF7 219 aa8.8□□□□□ -1
CPNE1-222ENST00000473373 FANCD2OSQ96PS1 177 aa8.8□□□□□ -1
CPNE1-222ENST00000473373 ZMAT4Q9H898 229 aa8.8□□□□□ -1
CPNE1-222ENST00000473373 ENY2Q9NPA8 101 aa8.8□□□□□ -1
CPNE1-222ENST00000473373 FAM212BQ9NTI7 297 aaPredicted RBP8.8□□□□□ -1
CPNE1-222ENST00000473373 MCUBQ9NWR8 336 aa8.8□□□□□ -1
CPNE1-222ENST00000473373 IGLV11-55A0A075B6I3 123 aa8.79□□□□□ -1
CPNE1-222ENST00000473373 IGHV3-21A0A0B4J1V1 117 aa8.79□□□□□ -1
CPNE1-222ENST00000473373 IGHV3-35A0A0C4DH35 117 aa8.79□□□□□ -1
CPNE1-222ENST00000473373 FABP12A6NFH5 140 aa8.79□□□□□ -1
CPNE1-222ENST00000473373 MFSD2BA6NFX1 497 aa8.79□□□□□ -1
CPNE1-222ENST00000473373 CGB1A6NKQ9 187 aa8.79□□□□□ -1
CPNE1-222ENST00000473373 C15orf61A6NNL5 157 aa8.79□□□□□ -1
CPNE1-222ENST00000473373 IFNA17P01571 189 aa8.79□□□□□ -1
CPNE1-222ENST00000473373 CLEC3BP05452 202 aa8.79□□□□□ -1
CPNE1-222ENST00000473373 CSN3P07498 182 aa8.79□□□□□ -1
CPNE1-222ENST00000473373 FGF2P09038 288 aa8.79□□□□□ -1
CPNE1-222ENST00000473373 ERHP84090 104 aaKnown RBP8.79□□□□□ -1
CPNE1-222ENST00000473373 OR4D10Q8NGI6 311 aa8.79□□□□□ -1
CPNE1-222ENST00000473373 OR1L6Q8NGR2 347 aa8.79□□□□□ -1
CPNE1-222ENST00000473373 OR13C8Q8NGS7 320 aa8.79□□□□□ -1
CPNE1-222ENST00000473373 TERB2Q8NHR7 220 aa8.79□□□□□ -1
CPNE1-222ENST00000473373 SMIM4Q8WVI0 70 aa8.79□□□□□ -1
CPNE1-222ENST00000473373 PLEKHA3Q9HB20 300 aa8.79□□□□□ -1
CPNE1-222ENST00000473373 PALMDQ9NP74 551 aa8.79□□□□□ -1
CPNE1-222ENST00000473373 RSL24D1Q9UHA3 163 aaKnown RBP8.79□□□□□ -1
CPNE1-222ENST00000473373 U3KQK5 164 aa8.79□□□□□ -1
CPNE1-222ENST00000473373 TENM3Q9P273 2699 aa8.79□□□□□ -1
CPNE1-222ENST00000473373 OR2T8A6NH00 312 aa8.78□□□□□ -1
CPNE1-222ENST00000473373 FAUP35544 74 aaKnown RBP8.78□□□□□ -1
CPNE1-222ENST00000473373 HOXA1P49639 335 aaPredicted RBP8.78□□□□□ -1
CPNE1-222ENST00000473373 RND3P61587 244 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms