RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 ZNF501Q96CX3 271 aaPredicted RBP11.32□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 ADARB2-AS1A8MUL3 147 aa11.32□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 VDAC2P45880 294 aaPredicted RBP11.32□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 LHX2P50458 406 aa11.32□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 RIPPLY3P57055 190 aa11.32□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 FAM201AQ5SY85 155 aa11.32□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 LINC00305Q7Z4B0 112 aa11.32□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 MS4A6AQ9H2W1 248 aa11.32□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 PEBP1P30086 187 aaKnown RBP11.32□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 CDKN1AP38936 164 aa11.32□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 ASIPP42127 132 aa11.32□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 UBE2V2Q15819 145 aa11.32□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 MRPL18Q9H0U6 180 aaKnown RBP11.32□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 CA11O75493 328 aa11.32□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 TYMSP04818 313 aa11.32□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 ASAH2BP0C7U1 165 aa11.32□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 MMP16P51512 607 aa11.32□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 SLC25A45Q8N413 288 aa11.32□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 ORAOV1Q8WV07 137 aa11.32□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 MARCH11A6NNE9 402 aa11.32□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 GALP22466 123 aa11.32□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 FBXL15Q9H469 300 aa11.32□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 NPIPB4C9JG80 1138 aa11.31□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 FOXS1O43638 330 aa11.31□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 IGKV1D-16P01601 117 aa11.31□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 OR11H7Q8NGC8 314 aa11.31□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 KCNS1Q96KK3 526 aa11.31□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 SEMA5BQ9P283 1151 aa11.31□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 ARFGEF1Q9Y6D6 1849 aa11.31□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 LOC285556D6RIA3 1793 aa11.31□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 A0A0U1RQV5 110 aa11.31□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 A0A1W2PQF6 199 aa11.31□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 ZG16O60844 167 aa11.31□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 CRYBA2P53672 197 aa11.31□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 GFI1BQ5VTD9 330 aa11.31□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 TRAV24A0A0B4J272 114 aa11.31□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 NDUFA2O43678 99 aa11.31□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 NDUFA3O95167 84 aa11.31□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 LEPP41159 167 aa11.31□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 TSPAN7P41732 249 aa11.31□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 SCAND1P57086 179 aa11.31□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 DEFB104AQ8WTQ1 72 aa11.31□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 SCN10AQ9Y5Y9 1956 aa11.31□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 TOMM40O96008 361 aa11.31□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 CLDND2Q8NHS1 167 aa11.31□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 PTPN13Q12923 2485 aa11.3□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 CXorf51AA0A1B0GTR3 108 aa11.3□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 FAM27BQ5VT28 67 aa11.3□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 GCSAMQ8N6F7 178 aa11.3□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 WNT2BQ93097 391 aa11.3□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 TRGC2P03986 189 aa11.3□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 SRIP30626 198 aa11.3□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 SRSF4Q08170 494 aaKnown RBP11.3□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 SURF2Q15527 256 aaPredicted RBP11.3□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 C10orf111Q8N326 155 aa11.3□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 HOXA5P20719 270 aa11.3□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 BSPH1Q075Z2 132 aa11.3□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 LOC101059948A0A1B0GTJ6 334 aa11.3□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 METRNQ9UJH8 293 aa11.3□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 CD5LO43866 347 aa11.3□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 C1QAP02745 245 aa11.3□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 C12orf54Q6X4T0 127 aa11.3□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 GRIFINA4D1Z8 144 aa11.3□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 RPS11P62280 158 aaKnown RBP eCLIP11.3□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 CHCHD5Q9BSY4 110 aa11.3□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 TRAV30A0A087WSZ9 112 aa11.29□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 A0A1W2PPV9 198 aa11.29□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 VWC2LB2RUY7 222 aa11.29□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 APOBEC3AP31941 199 aaPredicted RBP11.29□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 RRHO14718 337 aa11.29□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 RPS20P60866 119 aaKnown RBP11.29□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 MESP2Q0VG99 397 aa11.29□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 DLL3Q9NYJ7 618 aa11.29□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 HLA-DQA1P01909 254 aa11.29□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 BCL2P10415 239 aa11.29□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 PTPRDP23468 1912 aa11.29□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 FOXA3P55318 350 aaPredicted RBP11.29□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 NANOS3P60323 173 aaKnown RBP11.29□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 RNF182Q8N6D2 247 aa11.29□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 HOGA1Q86XE5 327 aa11.29□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 SDF2L1Q9HCN8 221 aa11.29□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 TECTAO75443 2155 aa11.29□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 RPL39P5Q59GN2 51 aa11.29□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 SCARF2Q96GP6 870 aaPredicted RBP11.29□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 ABHD17AQ96GS6 310 aa11.29□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 TMEM74BQ9NUR3 256 aa11.29□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 NRIP2Q9BQI9 281 aa11.29□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 DSPPQ9NZW4 1301 aa11.28□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 H1FOOQ8IZA3 346 aaPredicted RBP11.28□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 LRTM2Q8N967 370 aa11.28□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 KCNE5Q9UJ90 142 aa11.28□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 OR9G1Q8NH87 305 aa11.28□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 HMGCLL1Q8TB92 370 aa11.28□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 ADAMTSL1Q8N6G6 1762 aa11.28□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 ZNF98A6NK75 572 aa11.28□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 ZNF250P15622 560 aa11.28□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 FAM208BQ5VWN6 2430 aa11.28□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 LNP1A1A4G5 178 aa11.28□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 SERF2P84101 59 aa11.28□□□□□ -0.6
NPHP3-ACAD11-201ENST00000471702 SFXN3Q9BWM7 321 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms