RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 PEBP4Q96S96 227 aa2.73□□□□□ -1.97
PTCD3-205ENST00000464541 WDR61Q9GZS3 305 aaKnown RBP2.73□□□□□ -1.97
PTCD3-205ENST00000464541 TPT1P8Q9HAU6 139 aa2.73□□□□□ -1.97
PTCD3-205ENST00000464541 TMEM38BQ9NVV0 291 aa2.73□□□□□ -1.97
PTCD3-205ENST00000464541 FBXL12Q9NXK8 326 aa2.73□□□□□ -1.97
PTCD3-205ENST00000464541 SLC23A2Q9UGH3 650 aa2.73□□□□□ -1.97
PTCD3-205ENST00000464541 COQ4Q9Y3A0 265 aa2.73□□□□□ -1.97
PTCD3-205ENST00000464541 ASB4Q9Y574 426 aa2.73□□□□□ -1.97
PTCD3-205ENST00000464541 IGHV3-21A0A0B4J1V1 117 aa2.72□□□□□ -1.97
PTCD3-205ENST00000464541 IGHV3-43A0A0B4J1X8 118 aa2.72□□□□□ -1.97
PTCD3-205ENST00000464541 A0A0J9YY10 115 aa2.72□□□□□ -1.97
PTCD3-205ENST00000464541 A0A1B0GX78 115 aa2.72□□□□□ -1.97
PTCD3-205ENST00000464541 DUXBA0A1W2PPF3 345 aa2.72□□□□□ -1.97
PTCD3-205ENST00000464541 C16orf90A8MZG2 172 aa2.72□□□□□ -1.97
PTCD3-205ENST00000464541 LST1O00453 97 aa2.72□□□□□ -1.97
PTCD3-205ENST00000464541 IFNA10P01566 189 aa2.72□□□□□ -1.97
PTCD3-205ENST00000464541 APOC1P02654 83 aa2.72□□□□□ -1.97
PTCD3-205ENST00000464541 GZMHP20718 246 aa2.72□□□□□ -1.97
PTCD3-205ENST00000464541 TBPL1P62380 186 aa2.72□□□□□ -1.97
PTCD3-205ENST00000464541 HBA1P69905 142 aa2.72□□□□□ -1.97
PTCD3-205ENST00000464541 DHRS2Q13268 280 aa2.72□□□□□ -1.97
PTCD3-205ENST00000464541 FAM104BQ5XKR9 115 aa2.72□□□□□ -1.97
PTCD3-205ENST00000464541 AGTRAPQ6RW13 159 aa2.72□□□□□ -1.97
PTCD3-205ENST00000464541 SSH2Q76I76 1423 aa2.72□□□□□ -1.97
PTCD3-205ENST00000464541 AMN1Q8IY45 258 aa2.72□□□□□ -1.97
PTCD3-205ENST00000464541 OR5A1Q8NGJ0 315 aa2.72□□□□□ -1.97
PTCD3-205ENST00000464541 OR5P3Q8WZ94 311 aa2.72□□□□□ -1.97
PTCD3-205ENST00000464541 TOMM6Q96B49 74 aa2.72□□□□□ -1.97
PTCD3-205ENST00000464541 CCDC115Q96NT0 180 aa2.72□□□□□ -1.97
PTCD3-205ENST00000464541 DOHHQ9BU89 302 aa2.72□□□□□ -1.97
PTCD3-205ENST00000464541 ZNF286AQ9HBT8 521 aa2.72□□□□□ -1.97
PTCD3-205ENST00000464541 LAMTOR2Q9Y2Q5 125 aa2.72□□□□□ -1.97
PTCD3-205ENST00000464541 MRPS16Q9Y3D3 137 aaKnown RBP2.72□□□□□ -1.97
PTCD3-205ENST00000464541 ARAP3Q8WWN8 1544 aa2.72□□□□□ -1.97
PTCD3-205ENST00000464541 SOGA1O94964 1423 aa2.71□□□□□ -1.98
PTCD3-205ENST00000464541 TMEM269A0A1B0GVZ9 245 aa2.71□□□□□ -1.98
PTCD3-205ENST00000464541 TMEM189A5PLL7 270 aa2.71□□□□□ -1.98
PTCD3-205ENST00000464541 DPRXA6NFQ7 191 aa2.71□□□□□ -1.98
PTCD3-205ENST00000464541 MIF4GDA9UHW6 222 aaKnown RBP2.71□□□□□ -1.98
PTCD3-205ENST00000464541 J3KT08 172 aa2.71□□□□□ -1.98
PTCD3-205ENST00000464541 UBE2L6O14933 153 aa2.71□□□□□ -1.98
PTCD3-205ENST00000464541 TPST1O60507 370 aa2.71□□□□□ -1.98
PTCD3-205ENST00000464541 NRASP01111 189 aa2.71□□□□□ -1.98
PTCD3-205ENST00000464541 HRASP01112 189 aa2.71□□□□□ -1.98
PTCD3-205ENST00000464541 KRASP01116 189 aa2.71□□□□□ -1.98
PTCD3-205ENST00000464541 SRP19P09132 144 aaKnown RBP2.71□□□□□ -1.98
PTCD3-205ENST00000464541 P0C880 135 aa2.71□□□□□ -1.98
PTCD3-205ENST00000464541 GPX2P18283 190 aa2.71□□□□□ -1.98
PTCD3-205ENST00000464541 ATP5G3P48201 142 aa2.71□□□□□ -1.98
PTCD3-205ENST00000464541 DAPP51397 102 aa2.71□□□□□ -1.98
PTCD3-205ENST00000464541 CMC4P56277 68 aaPredicted RBP2.71□□□□□ -1.98
PTCD3-205ENST00000464541 PIGPP57054 158 aa2.71□□□□□ -1.98
PTCD3-205ENST00000464541 FGF12P61328 243 aa2.71□□□□□ -1.98
PTCD3-205ENST00000464541 DEFA6Q01524 100 aa2.71□□□□□ -1.98
PTCD3-205ENST00000464541 HTR4Q13639 388 aa2.71□□□□□ -1.98
PTCD3-205ENST00000464541 ZNF678Q5SXM1 525 aa2.71□□□□□ -1.98
PTCD3-205ENST00000464541 ZNF664Q8N3J9 261 aa2.71□□□□□ -1.98
PTCD3-205ENST00000464541 OR8J3Q8NGG0 315 aa2.71□□□□□ -1.98
PTCD3-205ENST00000464541 C1orf54Q8WWF1 131 aa2.71□□□□□ -1.98
PTCD3-205ENST00000464541 ISOC1Q96CN7 298 aa2.71□□□□□ -1.98
PTCD3-205ENST00000464541 VPS25Q9BRG1 176 aa2.71□□□□□ -1.98
PTCD3-205ENST00000464541 SHANK2-AS3Q9BTD1 123 aa2.71□□□□□ -1.98
PTCD3-205ENST00000464541 MIA3Q5JRA6 1907 aa2.71□□□□□ -1.98
PTCD3-205ENST00000464541 ROBO3Q96MS0 1386 aa2.71□□□□□ -1.98
PTCD3-205ENST00000464541 COL5A1P20908 1838 aaPredicted RBP2.7□□□□□ -1.98
PTCD3-205ENST00000464541 TRAV4A0A0B4J268 109 aa2.7□□□□□ -1.98
PTCD3-205ENST00000464541 A8MUN3 132 aa2.7□□□□□ -1.98
PTCD3-205ENST00000464541 TRAPPC2LH3BP13 241 aa2.7□□□□□ -1.98
PTCD3-205ENST00000464541 IGHV1-46P01743 117 aa2.7□□□□□ -1.98
PTCD3-205ENST00000464541 RAB13P51153 203 aa2.7□□□□□ -1.98
PTCD3-205ENST00000464541 FKBP1AP62942 108 aaKnown RBP2.7□□□□□ -1.98
PTCD3-205ENST00000464541 BAMBIQ13145 260 aa2.7□□□□□ -1.98
PTCD3-205ENST00000464541 ENDOGQ14249 297 aaKnown RBP2.7□□□□□ -1.98
PTCD3-205ENST00000464541 PRSS54Q6PEW0 395 aa2.7□□□□□ -1.98
PTCD3-205ENST00000464541 AMTNQ6UX39 209 aa2.7□□□□□ -1.98
PTCD3-205ENST00000464541 TMEM86AQ8N2M4 240 aa2.7□□□□□ -1.98
PTCD3-205ENST00000464541 OR4K13Q8NH42 304 aa2.7□□□□□ -1.98
PTCD3-205ENST00000464541 SGMS2Q8NHU3 365 aa2.7□□□□□ -1.98
PTCD3-205ENST00000464541 THEM6Q8WUY1 208 aa2.7□□□□□ -1.98
PTCD3-205ENST00000464541 ITLN2Q8WWU7 325 aaPredicted RBP2.7□□□□□ -1.98
PTCD3-205ENST00000464541 OR2J1Q9GZK6 312 aa2.7□□□□□ -1.98
PTCD3-205ENST00000464541 C11orf68Q9H3H3 251 aaKnown RBP2.7□□□□□ -1.98
PTCD3-205ENST00000464541 CEP152O94986 1710 aa2.7□□□□□ -1.98
PTCD3-205ENST00000464541 PTPRJQ12913 1337 aa2.69□□□□□ -1.98
PTCD3-205ENST00000464541 FMN1Q68DA7 1419 aa2.69□□□□□ -1.98
PTCD3-205ENST00000464541 UHRF1BP1Q6BDS2 1440 aa2.69□□□□□ -1.98
PTCD3-205ENST00000464541 A0A1B0GX51 115 aa2.69□□□□□ -1.98
PTCD3-205ENST00000464541 C9JCJ5 164 aa2.69□□□□□ -1.98
PTCD3-205ENST00000464541 CLDN25C9JDP6 229 aa2.69□□□□□ -1.98
PTCD3-205ENST00000464541 CSN2P05814 226 aa2.69□□□□□ -1.98
PTCD3-205ENST00000464541 OR5AC1P0C628 307 aa2.69□□□□□ -1.98
PTCD3-205ENST00000464541 CD28P10747 220 aa2.69□□□□□ -1.98
PTCD3-205ENST00000464541 NTF3P20783 257 aa2.69□□□□□ -1.98
PTCD3-205ENST00000464541 CASP1P29466 404 aa2.69□□□□□ -1.98
PTCD3-205ENST00000464541 S100A7P31151 101 aa2.69□□□□□ -1.98
PTCD3-205ENST00000464541 CA5AP35218 305 aa2.69□□□□□ -1.98
PTCD3-205ENST00000464541 DEFA3P59666 94 aa2.69□□□□□ -1.98
PTCD3-205ENST00000464541 BSPH1Q075Z2 132 aa2.69□□□□□ -1.98
PTCD3-205ENST00000464541 RPL22L1Q6P5R6 122 aaKnown RBP2.69□□□□□ -1.98
PTCD3-205ENST00000464541 OR13C4Q8NGS5 318 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms