RNA–Protein interactions for RNA: ENST00000463308.1

NDUFA4-202, Transcript of NDUFA4, mitochondrial complex associated, humanhuman

TSL 2

Gene NDUFA4, Length 288 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4-202ENST00000463308 Q6ZSA8 131 aa0.56□□□□□ -2.32
NDUFA4-202ENST00000463308 ZNF550Q7Z398 422 aa0.56□□□□□ -2.32
NDUFA4-202ENST00000463308 KTN1-AS1Q86SY8 53 aa0.56□□□□□ -2.32
NDUFA4-202ENST00000463308 C20orf196Q8IYI0 205 aa0.56□□□□□ -2.32
NDUFA4-202ENST00000463308 LINC00471Q8N535 108 aa0.56□□□□□ -2.32
NDUFA4-202ENST00000463308 DEFB125Q8N687 156 aa0.56□□□□□ -2.32
NDUFA4-202ENST00000463308 CLDN22Q8N7P3 220 aa0.56□□□□□ -2.32
NDUFA4-202ENST00000463308 OR1M1Q8NGA1 313 aa0.56□□□□□ -2.32
NDUFA4-202ENST00000463308 GPR32P1Q8NGA4 272 aa0.56□□□□□ -2.32
NDUFA4-202ENST00000463308 OR1L8Q8NGR8 309 aa0.56□□□□□ -2.32
NDUFA4-202ENST00000463308 MCFD2Q8NI22 146 aa0.56□□□□□ -2.32
NDUFA4-202ENST00000463308 JOSD2Q8TAC2 188 aa0.56□□□□□ -2.32
NDUFA4-202ENST00000463308 SLC25A40Q8TBP6 338 aa0.56□□□□□ -2.32
NDUFA4-202ENST00000463308 SMCR5Q8TEV8 140 aa0.56□□□□□ -2.32
NDUFA4-202ENST00000463308 SLC35B4Q969S0 331 aa0.56□□□□□ -2.32
NDUFA4-202ENST00000463308 OPTNQ96CV9 577 aa0.56□□□□□ -2.32
NDUFA4-202ENST00000463308 CMSS1Q9BQ75 279 aaKnown RBP0.56□□□□□ -2.32
NDUFA4-202ENST00000463308 UPK3BQ9BT76 320 aa0.56□□□□□ -2.32
NDUFA4-202ENST00000463308 DOHHQ9BU89 302 aa0.56□□□□□ -2.32
NDUFA4-202ENST00000463308 C9orf16Q9BUW7 83 aa0.56□□□□□ -2.32
NDUFA4-202ENST00000463308 TMEM147Q9BVK8 224 aa0.56□□□□□ -2.32
NDUFA4-202ENST00000463308 TIMM21Q9BVV7 248 aa0.56□□□□□ -2.32
NDUFA4-202ENST00000463308 KIFC1Q9BW19 673 aa0.56□□□□□ -2.32
NDUFA4-202ENST00000463308 TRIM4Q9C037 500 aa0.56□□□□□ -2.32
NDUFA4-202ENST00000463308 OR8D2Q9GZM6 311 aa0.56□□□□□ -2.32
NDUFA4-202ENST00000463308 WDR61Q9GZS3 305 aaKnown RBP0.56□□□□□ -2.32
NDUFA4-202ENST00000463308 VCX3BQ9H321 246 aa0.56□□□□□ -2.32
NDUFA4-202ENST00000463308 EFCAB1Q9HAE3 211 aa0.56□□□□□ -2.32
NDUFA4-202ENST00000463308 GLTPQ9NZD2 209 aa0.56□□□□□ -2.32
NDUFA4-202ENST00000463308 DOK5Q9P104 306 aa0.56□□□□□ -2.32
NDUFA4-202ENST00000463308 AK3Q9UIJ7 227 aa0.56□□□□□ -2.32
NDUFA4-202ENST00000463308 ARL2BPQ9Y2Y0 163 aa0.56□□□□□ -2.32
NDUFA4-202ENST00000463308 TTC21AQ8NDW8 1320 aa0.56□□□□□ -2.32
NDUFA4-202ENST00000463308 KMT2EQ8IZD2 1858 aa0.56□□□□□ -2.32
NDUFA4-202ENST00000463308 C9orf84Q5VXU9 1444 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 SHANK3Q9BYB0 1731 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 FBN2P35556 2912 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 ARAP3Q8WWN8 1544 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 hCG_1818297A0A087WSY0 165 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 IGKV1D-43A0A0B4J1Z2 117 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 TRAV3A0A0B4J244 114 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 A0A0D9SEW6 157 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 SMIM9A6NGZ8 99 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 TMEM212A6NML5 194 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 A8MT66 165 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 FABP5P3A8MUU1 101 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 LY6LH3BQJ8 138 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 HMGB3O15347 200 aaKnown RBP0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 PDE6DO43924 150 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 NOS1APO75052 506 aaPredicted RBP0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 ZNF737O75373 536 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 CIAO1O76071 339 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 NDUFB2O95178 105 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 IFNA6P05013 189 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 CRYGAP11844 174 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 HIST1H2BOP23527 126 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 S100A4P26447 101 aaKnown RBP0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 G0S2P27469 103 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 HIST1H2BBP33778 126 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 PPP1R2P41236 205 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 HIST1H2BDP58876 126 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 SNRPD2P62316 118 aaKnown RBP0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 POLR2GP62487 172 aaKnown RBP eCLIP0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 HIST1H2BCP62807 126 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 RANP62826 216 aaKnown RBP0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 H3F3AP84243 136 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 RUNX1Q01196 453 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 CAV1Q03135 178 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 ZNF90Q03938 601 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 RPL18Q07020 188 aaKnown RBP0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 SRSF6Q13247 344 aaKnown RBP0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 OR2F1Q13607 317 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 RHEBQ15382 184 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 SS18Q15532 418 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 HIST3H3Q16695 136 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 HIST2H2BEQ16778 126 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 ACOT6Q3I5F7 207 aaPredicted RBP0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 ZNF791Q3KP31 576 aaPredicted RBP0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 KHDC3LQ587J8 217 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 PABPC1L2AQ5JQF8 200 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 PPP1R2P3Q6NXS1 205 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 LPCAT3Q6P1A2 487 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 FAM173BQ6P4H8 233 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 LYZL1Q6UWQ5 148 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 ALKAL1Q6UXT8 129 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 AAED1Q7RTV5 226 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 OOSP2Q86WS3 158 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 OR6V1Q8N148 313 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 TMEM86AQ8N2M4 240 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 LRRC25Q8N386 305 aaPredicted RBP0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 TMEM86BQ8N661 226 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 ZNF283Q8N7M2 679 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 ZNF439Q8NDP4 499 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 OR52R1Q8NGF1 315 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 CLDND2Q8NHS1 167 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 SLC7A6Q92536 515 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 HIST1H2BHQ93079 126 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 TMEM106AQ96A25 262 aa0.55□□□□□ -2.32
NDUFA4-202ENST00000463308 ROPN1LQ96C74 230 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms