RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 SRRM4A7MD48 611 aaKnown RBP5.51□□□□□ -1.53
ECHDC1-210ENST00000454859 B4DSR2 109 aa5.51□□□□□ -1.53
ECHDC1-210ENST00000454859 RRHO14718 337 aa5.51□□□□□ -1.53
ECHDC1-210ENST00000454859 KCNAB3O43448 404 aa5.51□□□□□ -1.53
ECHDC1-210ENST00000454859 FBXO24O75426 580 aa5.51□□□□□ -1.53
ECHDC1-210ENST00000454859 VENTXO95231 258 aa5.51□□□□□ -1.53
ECHDC1-210ENST00000454859 HOXB4P17483 251 aaPredicted RBP5.51□□□□□ -1.53
ECHDC1-210ENST00000454859 TMEM267Q0VDI3 215 aaPredicted RBP5.51□□□□□ -1.53
ECHDC1-210ENST00000454859 ACOT6Q3I5F7 207 aaPredicted RBP5.51□□□□□ -1.53
ECHDC1-210ENST00000454859 C10orf91Q5T1B1 145 aa5.51□□□□□ -1.53
ECHDC1-210ENST00000454859 Q6ZRG5 221 aa5.51□□□□□ -1.53
ECHDC1-210ENST00000454859 TMEM144Q7Z5S9 345 aa5.51□□□□□ -1.53
ECHDC1-210ENST00000454859 MOB3BQ86TA1 216 aa5.51□□□□□ -1.53
ECHDC1-210ENST00000454859 PPP1R27Q86WC6 154 aa5.51□□□□□ -1.53
ECHDC1-210ENST00000454859 TMEM217Q8N7C4 229 aa5.51□□□□□ -1.53
ECHDC1-210ENST00000454859 HSD17B11Q8NBQ5 300 aa5.51□□□□□ -1.53
ECHDC1-210ENST00000454859 CXorf58Q96LI9 332 aa5.51□□□□□ -1.53
ECHDC1-210ENST00000454859 LSM4Q9Y4Z0 139 aaKnown RBP5.51□□□□□ -1.53
ECHDC1-210ENST00000454859 ARL2-SNX15V9GYD0 113 aa5.51□□□□□ -1.53
ECHDC1-210ENST00000454859 SEC14L6B5MCN3 397 aa5.5□□□□□ -1.53
ECHDC1-210ENST00000454859 J3QKU1 62 aa5.5□□□□□ -1.53
ECHDC1-210ENST00000454859 NBR2O15453 112 aa5.5□□□□□ -1.53
ECHDC1-210ENST00000454859 IFNA1P01562 189 aa5.5□□□□□ -1.53
ECHDC1-210ENST00000454859 IFNA4P05014 189 aa5.5□□□□□ -1.53
ECHDC1-210ENST00000454859 CD5P06127 495 aa5.5□□□□□ -1.53
ECHDC1-210ENST00000454859 H2AFB1P0C5Y9 115 aa5.5□□□□□ -1.53
ECHDC1-210ENST00000454859 RPL27AP46776 148 aaKnown RBP5.5□□□□□ -1.53
ECHDC1-210ENST00000454859 RPL29P47914 159 aaKnown RBP5.5□□□□□ -1.53
ECHDC1-210ENST00000454859 SELENOTP62341 195 aa5.5□□□□□ -1.53
ECHDC1-210ENST00000454859 LOXL1Q08397 574 aaPredicted RBP5.5□□□□□ -1.53
ECHDC1-210ENST00000454859 ARL16Q0P5N6 197 aa5.5□□□□□ -1.53
ECHDC1-210ENST00000454859 UTF1Q5T230 341 aa5.5□□□□□ -1.53
ECHDC1-210ENST00000454859 TEPPQ6URK8 271 aa5.5□□□□□ -1.53
ECHDC1-210ENST00000454859 SSX9Q7RTT3 188 aa5.5□□□□□ -1.53
ECHDC1-210ENST00000454859 Q8N6K4 173 aa5.5□□□□□ -1.53
ECHDC1-210ENST00000454859 OR1P1Q8NH06 330 aa5.5□□□□□ -1.53
ECHDC1-210ENST00000454859 C22orf15Q8WYQ4 148 aa5.5□□□□□ -1.53
ECHDC1-210ENST00000454859 BSCL2Q96G97 398 aaPredicted RBP5.5□□□□□ -1.53
ECHDC1-210ENST00000454859 ATP6V0BQ99437 205 aa5.5□□□□□ -1.53
ECHDC1-210ENST00000454859 SEC11CQ9BY50 192 aa5.5□□□□□ -1.53
ECHDC1-210ENST00000454859 ARID1AO14497 2285 aa5.5□□□□□ -1.53
ECHDC1-210ENST00000454859 IGHV3-7P01780 117 aa5.49□□□□□ -1.53
ECHDC1-210ENST00000454859 FABP1P07148 127 aa5.49□□□□□ -1.53
ECHDC1-210ENST00000454859 FBP1P09467 338 aa5.49□□□□□ -1.53
ECHDC1-210ENST00000454859 RNASE2P10153 161 aaKnown RBP5.49□□□□□ -1.53
ECHDC1-210ENST00000454859 FGF7P21781 194 aa5.49□□□□□ -1.53
ECHDC1-210ENST00000454859 COX7A1P24310 79 aa5.49□□□□□ -1.53
ECHDC1-210ENST00000454859 ZFP36P26651 326 aaKnown RBP5.49□□□□□ -1.53
ECHDC1-210ENST00000454859 LINC00205P59089 165 aa5.49□□□□□ -1.53
ECHDC1-210ENST00000454859 SRSF1Q07955 248 aaKnown RBP eCLIP5.49□□□□□ -1.53
ECHDC1-210ENST00000454859 FAM74A1Q5RGS3 127 aa5.49□□□□□ -1.53
ECHDC1-210ENST00000454859 OR8G2PQ6IF36 304 aa5.49□□□□□ -1.53
ECHDC1-210ENST00000454859 C16orf82Q7Z2V1 217 aa5.49□□□□□ -1.53
ECHDC1-210ENST00000454859 CITED4Q96RK1 184 aa5.49□□□□□ -1.53
ECHDC1-210ENST00000454859 P2RX4Q99571 388 aa5.49□□□□□ -1.53
ECHDC1-210ENST00000454859 NPCDR1Q9BY65 106 aa5.49□□□□□ -1.53
ECHDC1-210ENST00000454859 ACTR3CQ9C0K3 210 aaPredicted RBP5.49□□□□□ -1.53
ECHDC1-210ENST00000454859 MEGF9Q9H1U4 602 aa5.49□□□□□ -1.53
ECHDC1-210ENST00000454859 ZNF430Q9H8G1 570 aaPredicted RBP5.49□□□□□ -1.53
ECHDC1-210ENST00000454859 ZNF580Q9UK33 172 aa5.49□□□□□ -1.53
ECHDC1-210ENST00000454859 RNF24Q9Y225 148 aa5.49□□□□□ -1.53
ECHDC1-210ENST00000454859 CARHSP1Q9Y2V2 147 aaKnown RBP5.49□□□□□ -1.53
ECHDC1-210ENST00000454859 SPENQ96T58 3664 aaKnown RBP5.49□□□□□ -1.53
ECHDC1-210ENST00000454859 TRAV3A0A0B4J244 114 aa5.49□□□□□ -1.53
ECHDC1-210ENST00000454859 CTXND1A0A1B0GTU2 59 aa5.49□□□□□ -1.53
ECHDC1-210ENST00000454859 MEX3AA1L020 520 aaKnown RBP5.49□□□□□ -1.53
ECHDC1-210ENST00000454859 RNASEK-C17orf49H0YIS7 233 aa5.49□□□□□ -1.53
ECHDC1-210ENST00000454859 H3BP45 60 aa5.49□□□□□ -1.53
ECHDC1-210ENST00000454859 I3L521 148 aa5.49□□□□□ -1.53
ECHDC1-210ENST00000454859 M0QZK8 103 aa5.49□□□□□ -1.53
ECHDC1-210ENST00000454859 SCGB2A1O75556 95 aa5.49□□□□□ -1.53
ECHDC1-210ENST00000454859 LY6HO94772 140 aa5.49□□□□□ -1.53
ECHDC1-210ENST00000454859 MT-CO2P00403 227 aa5.49□□□□□ -1.53
ECHDC1-210ENST00000454859 MSMBP08118 114 aa5.49□□□□□ -1.53
ECHDC1-210ENST00000454859 M6PRP20645 277 aa5.49□□□□□ -1.53
ECHDC1-210ENST00000454859 CD69Q07108 199 aa5.49□□□□□ -1.53
ECHDC1-210ENST00000454859 KHDC3LQ587J8 217 aa5.49□□□□□ -1.53
ECHDC1-210ENST00000454859 ZNF562Q6V9R5 426 aa5.49□□□□□ -1.53
ECHDC1-210ENST00000454859 RBMS3Q6XE24 437 aaKnown RBP5.49□□□□□ -1.53
ECHDC1-210ENST00000454859 S100A7AQ86SG5 101 aa5.49□□□□□ -1.53
ECHDC1-210ENST00000454859 CCDC28AQ8IWP9 274 aa5.49□□□□□ -1.53
ECHDC1-210ENST00000454859 VKORC1L1Q8N0U8 176 aa5.49□□□□□ -1.53
ECHDC1-210ENST00000454859 NANPQ8TBE9 248 aa5.49□□□□□ -1.53
ECHDC1-210ENST00000454859 TBX15Q96SF7 602 aa5.49□□□□□ -1.53
ECHDC1-210ENST00000454859 METTL1Q9UBP6 276 aaKnown RBP5.49□□□□□ -1.53
ECHDC1-210ENST00000454859 FASNP49327 2511 aaKnown RBP5.49□□□□□ -1.53
ECHDC1-210ENST00000454859 TMEM218A2RU14 115 aa5.48□□□□□ -1.53
ECHDC1-210ENST00000454859 SMCO3A2RU48 225 aa5.48□□□□□ -1.53
ECHDC1-210ENST00000454859 NPIPB5A8MRT5 1133 aa5.48□□□□□ -1.53
ECHDC1-210ENST00000454859 TIMM23O14925 209 aa5.48□□□□□ -1.53
ECHDC1-210ENST00000454859 NPFFO15130 113 aa5.48□□□□□ -1.53
ECHDC1-210ENST00000454859 SLC25A17O43808 307 aa5.48□□□□□ -1.53
ECHDC1-210ENST00000454859 BRI3O95415 125 aa5.48□□□□□ -1.53
ECHDC1-210ENST00000454859 CA2P00918 260 aa5.48□□□□□ -1.53
ECHDC1-210ENST00000454859 PRB1P04280 392 aa5.48□□□□□ -1.53
ECHDC1-210ENST00000454859 CRYGCP07315 174 aa5.48□□□□□ -1.53
ECHDC1-210ENST00000454859 HIST1H1BP16401 226 aaKnown RBP5.48□□□□□ -1.53
ECHDC1-210ENST00000454859 S100A7P31151 101 aa5.48□□□□□ -1.53
ECHDC1-210ENST00000454859 PSMB3P49720 205 aa5.48□□□□□ -1.53
ECHDC1-210ENST00000454859 C5orf64Q2M2E5 130 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 5.9 ms