RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 C5orf30Q96GV9 206 aa6.29□□□□□ -1.4
HDAC9-214ENST00000441542 GTSF1LQ9H1H1 148 aa6.29□□□□□ -1.4
HDAC9-214ENST00000441542 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.29□□□□□ -1.4
HDAC9-214ENST00000441542 ZNF355PQ9NSJ1 428 aa6.29□□□□□ -1.4
HDAC9-214ENST00000441542 DLL3Q9NYJ7 618 aa6.29□□□□□ -1.4
HDAC9-214ENST00000441542 LSM4Q9Y4Z0 139 aaKnown RBP6.29□□□□□ -1.4
HDAC9-214ENST00000441542 FER1L5A0AVI2 2057 aa6.28□□□□□ -1.4
HDAC9-214ENST00000441542 FAM181BA6NEQ2 426 aa6.28□□□□□ -1.4
HDAC9-214ENST00000441542 F8WDY8 70 aa6.28□□□□□ -1.4
HDAC9-214ENST00000441542 MMP23AO75900 390 aa6.28□□□□□ -1.4
HDAC9-214ENST00000441542 Q0VG73 95 aa6.28□□□□□ -1.4
HDAC9-214ENST00000441542 FOXE3Q13461 319 aa6.28□□□□□ -1.4
HDAC9-214ENST00000441542 RAB30Q15771 203 aa6.28□□□□□ -1.4
HDAC9-214ENST00000441542 FAM27BQ5VT28 67 aa6.28□□□□□ -1.4
HDAC9-214ENST00000441542 FAM222BQ8WU58 562 aa6.28□□□□□ -1.4
HDAC9-214ENST00000441542 PIMREGQ9BSJ6 248 aa6.28□□□□□ -1.4
HDAC9-214ENST00000441542 OR2H1Q9GZK4 316 aa6.28□□□□□ -1.4
HDAC9-214ENST00000441542 MS4A5Q9H3V2 200 aa6.28□□□□□ -1.4
HDAC9-214ENST00000441542 UBE2ZQ9H832 354 aaPredicted RBP6.28□□□□□ -1.4
HDAC9-214ENST00000441542 MRPS16Q9Y3D3 137 aaKnown RBP6.28□□□□□ -1.4
HDAC9-214ENST00000441542 FREM1Q5H8C1 2179 aa6.28□□□□□ -1.4
HDAC9-214ENST00000441542 LRRC30A6NM36 301 aa6.28□□□□□ -1.4
HDAC9-214ENST00000441542 M0R296 226 aa6.28□□□□□ -1.4
HDAC9-214ENST00000441542 TMPRSS2O15393 492 aa6.28□□□□□ -1.4
HDAC9-214ENST00000441542 BRI3O95415 125 aa6.28□□□□□ -1.4
HDAC9-214ENST00000441542 CCL3P10147 92 aa6.28□□□□□ -1.4
HDAC9-214ENST00000441542 GCHFRP30047 84 aa6.28□□□□□ -1.4
HDAC9-214ENST00000441542 FOXG1P55316 489 aaPredicted RBP6.28□□□□□ -1.4
HDAC9-214ENST00000441542 OR1B1Q8NGR6 318 aa6.28□□□□□ -1.4
HDAC9-214ENST00000441542 SMIM12Q96EX1 92 aa6.28□□□□□ -1.4
HDAC9-214ENST00000441542 RARRES3Q9UL19 164 aa6.28□□□□□ -1.4
HDAC9-214ENST00000441542 CPAMD8Q8IZJ3 1885 aa6.28□□□□□ -1.4
HDAC9-214ENST00000441542 KLRC4-KLRK1H3BQV0 150 aa6.27□□□□□ -1.41
HDAC9-214ENST00000441542 H3BUT2 72 aa6.27□□□□□ -1.41
HDAC9-214ENST00000441542 CORTO00230 105 aa6.27□□□□□ -1.41
HDAC9-214ENST00000441542 ZFAND5O76080 213 aa6.27□□□□□ -1.41
HDAC9-214ENST00000441542 GRPP07492 148 aa6.27□□□□□ -1.41
HDAC9-214ENST00000441542 PTGDSP41222 190 aa6.27□□□□□ -1.41
HDAC9-214ENST00000441542 MIR17HGQ75NE6 70 aa6.27□□□□□ -1.41
HDAC9-214ENST00000441542 OR4F17Q8NGA8 305 aa6.27□□□□□ -1.41
HDAC9-214ENST00000441542 LSM10Q969L4 123 aaKnown RBP6.27□□□□□ -1.41
HDAC9-214ENST00000441542 FAM110AQ9BQ89 295 aa6.27□□□□□ -1.41
HDAC9-214ENST00000441542 TMEM38BQ9NVV0 291 aa6.27□□□□□ -1.41
HDAC9-214ENST00000441542 TIMM9Q9Y5J7 89 aa6.27□□□□□ -1.41
HDAC9-214ENST00000441542 V9GYV3 84 aa6.27□□□□□ -1.41
HDAC9-214ENST00000441542 ICE1Q9Y2F5 2266 aa6.27□□□□□ -1.41
HDAC9-214ENST00000441542 LTBP2Q14767 1821 aa6.27□□□□□ -1.41
HDAC9-214ENST00000441542 IGLV2-14P01704 120 aa6.27□□□□□ -1.41
HDAC9-214ENST00000441542 SUMO3P55854 103 aaPredicted RBP6.27□□□□□ -1.41
HDAC9-214ENST00000441542 BVES-AS1Q5T3Y7 98 aa6.27□□□□□ -1.41
HDAC9-214ENST00000441542 MUC15Q8N387 334 aa6.27□□□□□ -1.41
HDAC9-214ENST00000441542 C18orf32Q8TCD1 76 aa6.27□□□□□ -1.41
HDAC9-214ENST00000441542 C10orf35Q96D05 121 aa6.27□□□□□ -1.41
HDAC9-214ENST00000441542 GUCD1Q96NT3 240 aa6.27□□□□□ -1.41
HDAC9-214ENST00000441542 HSD17B10Q99714 261 aaKnown RBP6.27□□□□□ -1.41
HDAC9-214ENST00000441542 PKIBQ9C010 78 aa6.27□□□□□ -1.41
HDAC9-214ENST00000441542 SPTBN2O15020 2390 aa6.27□□□□□ -1.41
HDAC9-214ENST00000441542 TRAV25A0A0B4J276 109 aa6.27□□□□□ -1.41
HDAC9-214ENST00000441542 FCGR3BO75015 233 aa6.27□□□□□ -1.41
HDAC9-214ENST00000441542 SCGB2A1O75556 95 aa6.27□□□□□ -1.41
HDAC9-214ENST00000441542 NEURL1O76050 574 aa6.27□□□□□ -1.41
HDAC9-214ENST00000441542 CFHR1Q03591 330 aa6.27□□□□□ -1.41
HDAC9-214ENST00000441542 VWC2Q2TAL6 325 aa6.27□□□□□ -1.41
HDAC9-214ENST00000441542 IBA57Q5T440 356 aaKnown RBP6.27□□□□□ -1.41
HDAC9-214ENST00000441542 SLC25A34Q6PIV7 304 aa6.27□□□□□ -1.41
HDAC9-214ENST00000441542 MAFAQ8NHW3 353 aaPredicted RBP6.27□□□□□ -1.41
HDAC9-214ENST00000441542 TMEM45BQ96B21 275 aa6.27□□□□□ -1.41
HDAC9-214ENST00000441542 DAZAP1Q96EP5 407 aaKnown RBP6.27□□□□□ -1.41
HDAC9-214ENST00000441542 RNF125Q96EQ8 232 aa6.27□□□□□ -1.41
HDAC9-214ENST00000441542 SFXN3Q9BWM7 321 aa6.27□□□□□ -1.41
HDAC9-214ENST00000441542 RAB1BQ9H0U4 201 aa6.27□□□□□ -1.41
HDAC9-214ENST00000441542 PSG11Q9UQ72 335 aa6.27□□□□□ -1.41
HDAC9-214ENST00000441542 C7orf71A4D174 169 aa6.26□□□□□ -1.41
HDAC9-214ENST00000441542 FAM231BA6NCW3 169 aa6.26□□□□□ -1.41
HDAC9-214ENST00000441542 CXorf1O96002 111 aa6.26□□□□□ -1.41
HDAC9-214ENST00000441542 AMY1AP04745 511 aa6.26□□□□□ -1.41
HDAC9-214ENST00000441542 MYOD1P15172 320 aa6.26□□□□□ -1.41
HDAC9-214ENST00000441542 EDDM3AQ14507 147 aa6.26□□□□□ -1.41
HDAC9-214ENST00000441542 ASCL4Q6XD76 172 aa6.26□□□□□ -1.41
HDAC9-214ENST00000441542 CT55Q8WUE5 264 aa6.26□□□□□ -1.41
HDAC9-214ENST00000441542 TMEM54Q969K7 222 aa6.26□□□□□ -1.41
HDAC9-214ENST00000441542 DCTN5Q9BTE1 182 aa6.26□□□□□ -1.41
HDAC9-214ENST00000441542 EP300Q09472 2414 aaPredicted RBP6.26□□□□□ -1.41
HDAC9-214ENST00000441542 GJE1A6NN92 205 aa6.26□□□□□ -1.41
HDAC9-214ENST00000441542 IGHV3-48P01763 117 aa6.26□□□□□ -1.41
HDAC9-214ENST00000441542 LRRC10Q5BKY1 277 aa6.26□□□□□ -1.41
HDAC9-214ENST00000441542 C10orf128Q5T292 105 aa6.26□□□□□ -1.41
HDAC9-214ENST00000441542 MOB3BQ86TA1 216 aa6.26□□□□□ -1.41
HDAC9-214ENST00000441542 FER1L6-AS1Q8NA97 138 aa6.26□□□□□ -1.41
HDAC9-214ENST00000441542 OR5B3Q8NH48 314 aa6.26□□□□□ -1.41
HDAC9-214ENST00000441542 MGST2Q99735 147 aa6.26□□□□□ -1.41
HDAC9-214ENST00000441542 GNB1LQ9BYB4 327 aa6.26□□□□□ -1.41
HDAC9-214ENST00000441542 THYN1Q9P016 225 aa6.26□□□□□ -1.41
HDAC9-214ENST00000441542 HS3ST3A1Q9Y663 406 aa6.26□□□□□ -1.41
HDAC9-214ENST00000441542 LOC102723996A0A087X1L8 192 aa6.25□□□□□ -1.41
HDAC9-214ENST00000441542 A0A1B0GV72 72 aa6.25□□□□□ -1.41
HDAC9-214ENST00000441542 A0A1B0GW15 77 aa6.25□□□□□ -1.41
HDAC9-214ENST00000441542 C15orf62A8K5M9 175 aa6.25□□□□□ -1.41
HDAC9-214ENST00000441542 HAND1O96004 215 aa6.25□□□□□ -1.41
HDAC9-214ENST00000441542 TNFRSF4P43489 277 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms