RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 CEP295Q9C0D2 2601 aa11.21□□□□□ -0.61
PCNX3-202ENST00000439247 MYOD1P15172 320 aa11.21□□□□□ -0.61
PCNX3-202ENST00000439247 CYB561P49447 251 aa11.21□□□□□ -0.61
PCNX3-202ENST00000439247 HNRNPA3P51991 378 aaKnown RBP11.21□□□□□ -0.61
PCNX3-202ENST00000439247 CLDN18P56856 261 aa11.21□□□□□ -0.61
PCNX3-202ENST00000439247 FOXF2Q12947 444 aa11.21□□□□□ -0.61
PCNX3-202ENST00000439247 CFAP161Q6P656 301 aa11.21□□□□□ -0.61
PCNX3-202ENST00000439247 PQLC2Q6ZP29 291 aa11.21□□□□□ -0.61
PCNX3-202ENST00000439247 MRPL52Q86TS9 123 aaKnown RBP11.21□□□□□ -0.61
PCNX3-202ENST00000439247 RTL8AQ9BWD3 113 aa11.21□□□□□ -0.61
PCNX3-202ENST00000439247 SLC45A2Q9UMX9 530 aa11.21□□□□□ -0.61
PCNX3-202ENST00000439247 MGAQ8IWI9 3026 aa11.21□□□□□ -0.61
PCNX3-202ENST00000439247 IGKV3D-15A0A087WSY6 115 aa11.21□□□□□ -0.62
PCNX3-202ENST00000439247 C20orf202A1L168 122 aa11.21□□□□□ -0.62
PCNX3-202ENST00000439247 CRYBB3P26998 211 aa11.21□□□□□ -0.62
PCNX3-202ENST00000439247 EFNB3Q15768 340 aa11.21□□□□□ -0.62
PCNX3-202ENST00000439247 NRN1LQ496H8 165 aa11.21□□□□□ -0.62
PCNX3-202ENST00000439247 PTPRBP23467 1997 aa11.2□□□□□ -0.62
PCNX3-202ENST00000439247 TMEM30CPA0ZSE6 113 aa11.2□□□□□ -0.62
PCNX3-202ENST00000439247 ARR3P36575 388 aa11.2□□□□□ -0.62
PCNX3-202ENST00000439247 OPRK1P41145 380 aa11.2□□□□□ -0.62
PCNX3-202ENST00000439247 RBX1P62877 108 aa11.2□□□□□ -0.62
PCNX3-202ENST00000439247 ZNF146Q15072 292 aa11.2□□□□□ -0.62
PCNX3-202ENST00000439247 CENPWQ5EE01 88 aa11.2□□□□□ -0.62
PCNX3-202ENST00000439247 UTF1Q5T230 341 aa11.2□□□□□ -0.62
PCNX3-202ENST00000439247 PRAMEF5Q5TYX0 476 aa11.2□□□□□ -0.62
PCNX3-202ENST00000439247 PRAMEF6Q5VXH4 476 aa11.2□□□□□ -0.62
PCNX3-202ENST00000439247 NIT1Q86X76 327 aa11.2□□□□□ -0.62
PCNX3-202ENST00000439247 SFXN3Q9BWM7 321 aa11.2□□□□□ -0.62
PCNX3-202ENST00000439247 LINC00470Q9BZP3 86 aa11.2□□□□□ -0.62
PCNX3-202ENST00000439247 DLL1O00548 723 aa11.2□□□□□ -0.62
PCNX3-202ENST00000439247 CEACAM8P31997 349 aaPredicted RBP11.2□□□□□ -0.62
PCNX3-202ENST00000439247 ATP1A1-AS1Q5TC04 95 aa11.2□□□□□ -0.62
PCNX3-202ENST00000439247 MIR17HGQ75NE6 70 aa11.2□□□□□ -0.62
PCNX3-202ENST00000439247 GATA2P23769 480 aaPredicted RBP11.2□□□□□ -0.62
PCNX3-202ENST00000439247 EDDM3AQ14507 147 aa11.2□□□□□ -0.62
PCNX3-202ENST00000439247 TMEM136Q6ZRR5 245 aa11.2□□□□□ -0.62
PCNX3-202ENST00000439247 MOB3BQ86TA1 216 aa11.2□□□□□ -0.62
PCNX3-202ENST00000439247 GMPPAQ96IJ6 420 aaPredicted RBP11.2□□□□□ -0.62
PCNX3-202ENST00000439247 SPTBN4Q9H254 2564 aa11.19□□□□□ -0.62
PCNX3-202ENST00000439247 YLPM1P49750 1951 aaKnown RBP11.19□□□□□ -0.62
PCNX3-202ENST00000439247 RPL39P5Q59GN2 51 aa11.19□□□□□ -0.62
PCNX3-202ENST00000439247 STPG3Q8N7X2 389 aa11.19□□□□□ -0.62
PCNX3-202ENST00000439247 KCNS1Q96KK3 526 aa11.19□□□□□ -0.62
PCNX3-202ENST00000439247 UQCR10Q9UDW1 63 aa11.19□□□□□ -0.62
PCNX3-202ENST00000439247 FZR1Q9UM11 496 aa11.19□□□□□ -0.62
PCNX3-202ENST00000439247 TNCP24821 2201 aa11.19□□□□□ -0.62
PCNX3-202ENST00000439247 DPRXA6NFQ7 191 aa11.19□□□□□ -0.62
PCNX3-202ENST00000439247 BMPR1BO00238 502 aa11.19□□□□□ -0.62
PCNX3-202ENST00000439247 SSBP3Q9BWW4 388 aaPredicted RBP11.19□□□□□ -0.62
PCNX3-202ENST00000439247 MED13Q9UHV7 2174 aa11.19□□□□□ -0.62
PCNX3-202ENST00000439247 PRSS46E5RG02 174 aa11.18□□□□□ -0.62
PCNX3-202ENST00000439247 GFRA3O60609 400 aa11.18□□□□□ -0.62
PCNX3-202ENST00000439247 OR4A16Q8NH70 328 aa11.18□□□□□ -0.62
PCNX3-202ENST00000439247 FAM216AQ8WUB2 273 aa11.18□□□□□ -0.62
PCNX3-202ENST00000439247 FAM168AQ92567 244 aa11.18□□□□□ -0.62
PCNX3-202ENST00000439247 GP6Q9HCN6 339 aa11.18□□□□□ -0.62
PCNX3-202ENST00000439247 SERTAD4Q9NUC0 356 aa11.18□□□□□ -0.62
PCNX3-202ENST00000439247 A8MXE2 369 aa11.18□□□□□ -0.62
PCNX3-202ENST00000439247 OR10J4P0C629 311 aa11.18□□□□□ -0.62
PCNX3-202ENST00000439247 OR1C1Q15619 314 aa11.18□□□□□ -0.62
PCNX3-202ENST00000439247 LYG1Q8N1E2 194 aa11.18□□□□□ -0.62
PCNX3-202ENST00000439247 ZBTB34Q8NCN2 500 aa11.18□□□□□ -0.62
PCNX3-202ENST00000439247 TSKUQ8WUA8 353 aa11.18□□□□□ -0.62
PCNX3-202ENST00000439247 TAAR6Q96RI8 345 aa11.18□□□□□ -0.62
PCNX3-202ENST00000439247 GNB1LQ9BYB4 327 aa11.18□□□□□ -0.62
PCNX3-202ENST00000439247 POLDIP2Q9Y2S7 368 aa11.18□□□□□ -0.62
PCNX3-202ENST00000439247 ARFGEF3Q5TH69 2177 aa11.18□□□□□ -0.62
PCNX3-202ENST00000439247 OOEPA6NGQ2 149 aa11.18□□□□□ -0.62
PCNX3-202ENST00000439247 ZNF324O75467 553 aaPredicted RBP11.18□□□□□ -0.62
PCNX3-202ENST00000439247 CA2P00918 260 aa11.18□□□□□ -0.62
PCNX3-202ENST00000439247 MGST1P10620 155 aaKnown RBP11.18□□□□□ -0.62
PCNX3-202ENST00000439247 IGFBP2P18065 325 aa11.18□□□□□ -0.62
PCNX3-202ENST00000439247 GNG4P50150 75 aa11.18□□□□□ -0.62
PCNX3-202ENST00000439247 PSG5Q15238 335 aa11.18□□□□□ -0.62
PCNX3-202ENST00000439247 TMEM249Q2WGJ8 235 aa11.18□□□□□ -0.62
PCNX3-202ENST00000439247 SLC25A40Q8TBP6 338 aa11.18□□□□□ -0.62
PCNX3-202ENST00000439247 ST6GALNAC6Q969X2 333 aa11.18□□□□□ -0.62
PCNX3-202ENST00000439247 CLEC7AQ9BXN2 247 aa11.18□□□□□ -0.62
PCNX3-202ENST00000439247 HELTA6NFD8 242 aa11.17□□□□□ -0.62
PCNX3-202ENST00000439247 MPV17P39210 176 aa11.17□□□□□ -0.62
PCNX3-202ENST00000439247 RPP30P78346 268 aaKnown RBP11.17□□□□□ -0.62
PCNX3-202ENST00000439247 SLAQ13239 276 aa11.17□□□□□ -0.62
PCNX3-202ENST00000439247 SSPNQ14714 243 aa11.17□□□□□ -0.62
PCNX3-202ENST00000439247 LEAP2Q969E1 77 aa11.17□□□□□ -0.62
PCNX3-202ENST00000439247 OBP2BQ9NPH6 170 aa11.17□□□□□ -0.62
PCNX3-202ENST00000439247 CDC42EP3Q9UKI2 254 aa11.17□□□□□ -0.62
PCNX3-202ENST00000439247 VDAC2P45880 294 aaPredicted RBP11.17□□□□□ -0.62
PCNX3-202ENST00000439247 RELBQ01201 579 aa11.17□□□□□ -0.62
PCNX3-202ENST00000439247 RNF151Q2KHN1 245 aa11.17□□□□□ -0.62
PCNX3-202ENST00000439247 ZNF766Q5HY98 468 aa11.17□□□□□ -0.62
PCNX3-202ENST00000439247 C1orf229Q6ZS94 237 aaPredicted RBP11.17□□□□□ -0.62
PCNX3-202ENST00000439247 LINC00479Q96M42 142 aa11.17□□□□□ -0.62
PCNX3-202ENST00000439247 TMUB1Q9BVT8 246 aa11.17□□□□□ -0.62
PCNX3-202ENST00000439247 HINT2Q9BX68 163 aa11.17□□□□□ -0.62
PCNX3-202ENST00000439247 GCM1Q9NP62 436 aa11.17□□□□□ -0.62
PCNX3-202ENST00000439247 TSPOP30536 169 aa11.16□□□□□ -0.62
PCNX3-202ENST00000439247 CX3CL1P78423 397 aa11.16□□□□□ -0.62
PCNX3-202ENST00000439247 HSD17B10Q99714 261 aaKnown RBP11.16□□□□□ -0.62
PCNX3-202ENST00000439247 LOC105371242A0A075B767 164 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms