RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 SSBP2P81877 361 aaPredicted RBP16.4■□□□□ 0.22
CHD3-204ENST00000439235 GRPEL2Q8TAA5 225 aa16.4■□□□□ 0.22
CHD3-204ENST00000439235 THAP6Q8TBB0 222 aa16.4■□□□□ 0.22
CHD3-204ENST00000439235 RAB40CQ96S21 281 aa16.4■□□□□ 0.22
CHD3-204ENST00000439235 HSPB9Q9BQS6 159 aa16.4■□□□□ 0.22
CHD3-204ENST00000439235 SRSF8Q9BRL6 282 aaKnown RBP16.4■□□□□ 0.22
CHD3-204ENST00000439235 ESM1Q9NQ30 184 aa16.4■□□□□ 0.22
CHD3-204ENST00000439235 TLN2Q9Y4G6 2542 aa16.4■□□□□ 0.22
CHD3-204ENST00000439235 L7N2F9 121 aa16.39■□□□□ 0.21
CHD3-204ENST00000439235 DEDDO75618 318 aa16.39■□□□□ 0.21
CHD3-204ENST00000439235 RNASE1P07998 156 aaKnown RBP16.39■□□□□ 0.21
CHD3-204ENST00000439235 VAMP2P63027 116 aa16.39■□□□□ 0.21
CHD3-204ENST00000439235 SPINK9Q5DT21 86 aa16.39■□□□□ 0.21
CHD3-204ENST00000439235 C9orf152Q5JTZ5 239 aa16.39■□□□□ 0.21
CHD3-204ENST00000439235 PRSS54Q6PEW0 395 aa16.39■□□□□ 0.21
CHD3-204ENST00000439235 HSD17B13Q7Z5P4 300 aaPredicted RBP16.39■□□□□ 0.21
CHD3-204ENST00000439235 HIPK2Q9H2X6 1198 aa16.39■□□□□ 0.21
CHD3-204ENST00000439235 TRAV14DV4A0A0A6YYC5 116 aa16.38■□□□□ 0.21
CHD3-204ENST00000439235 SH2D7A6NKC9 451 aaPredicted RBP16.38■□□□□ 0.21
CHD3-204ENST00000439235 INS-IGF2F8WCM5 200 aa16.38■□□□□ 0.21
CHD3-204ENST00000439235 TRIM77I1YAP6 450 aa16.38■□□□□ 0.21
CHD3-204ENST00000439235 TCF21O43680 179 aa16.38■□□□□ 0.21
CHD3-204ENST00000439235 IAPPP10997 89 aa16.38■□□□□ 0.21
CHD3-204ENST00000439235 RPL15P61313 204 aaKnown RBP16.38■□□□□ 0.21
CHD3-204ENST00000439235 NDPQ00604 133 aa16.38■□□□□ 0.21
CHD3-204ENST00000439235 C11orf87Q6NUJ2 197 aa16.38■□□□□ 0.21
CHD3-204ENST00000439235 SLC35E3Q7Z769 313 aa16.38■□□□□ 0.21
CHD3-204ENST00000439235 PRSS22Q9GZN4 317 aa16.38■□□□□ 0.21
CHD3-204ENST00000439235 PARP11Q9NR21 331 aa16.38■□□□□ 0.21
CHD3-204ENST00000439235 MSGN1A6NI15 193 aa16.37■□□□□ 0.21
CHD3-204ENST00000439235 CGB1A6NKQ9 187 aa16.37■□□□□ 0.21
CHD3-204ENST00000439235 TEX22C9J3V5 150 aa16.37■□□□□ 0.21
CHD3-204ENST00000439235 E5RGE8 158 aa16.37■□□□□ 0.21
CHD3-204ENST00000439235 IGHG2P01859 326 aa16.37■□□□□ 0.21
CHD3-204ENST00000439235 TAS2R30P59541 319 aa16.37■□□□□ 0.21
CHD3-204ENST00000439235 RPL23AP62750 156 aaKnown RBP16.37■□□□□ 0.21
CHD3-204ENST00000439235 UBA52P62987 128 aaKnown RBP16.37■□□□□ 0.21
CHD3-204ENST00000439235 HEYLQ9NQ87 328 aaPredicted RBP16.37■□□□□ 0.21
CHD3-204ENST00000439235 MBD2Q9UBB5 411 aa16.37■□□□□ 0.21
CHD3-204ENST00000439235 WSB1Q9Y6I7 421 aa16.37■□□□□ 0.21
CHD3-204ENST00000439235 A0A1B0GW64 132 aa16.36■□□□□ 0.21
CHD3-204ENST00000439235 E7EUB6 86 aa16.36■□□□□ 0.21
CHD3-204ENST00000439235 H0YIZ8 118 aa16.36■□□□□ 0.21
CHD3-204ENST00000439235 SMLR1H3BR10 107 aa16.36■□□□□ 0.21
CHD3-204ENST00000439235 ATP6V0E1O15342 81 aa16.36■□□□□ 0.21
CHD3-204ENST00000439235 VDAC2P45880 294 aaPredicted RBP16.36■□□□□ 0.21
CHD3-204ENST00000439235 BLCAPP62952 87 aa16.36■□□□□ 0.21
CHD3-204ENST00000439235 ERHP84090 104 aaKnown RBP16.36■□□□□ 0.21
CHD3-204ENST00000439235 SGMS2Q8NHU3 365 aa16.36■□□□□ 0.21
CHD3-204ENST00000439235 OR5AC2Q9NZP5 309 aa16.36■□□□□ 0.21
CHD3-204ENST00000439235 SONP18583 2426 aaKnown RBP16.35■□□□□ 0.21
CHD3-204ENST00000439235 IGLC7A0M8Q6 106 aa16.35■□□□□ 0.21
CHD3-204ENST00000439235 C1QBP02746 253 aa16.35■□□□□ 0.21
CHD3-204ENST00000439235 SLC25A4P12235 298 aa16.35■□□□□ 0.21
CHD3-204ENST00000439235 LYL1P12980 280 aa16.35■□□□□ 0.21
CHD3-204ENST00000439235 RPP30P78346 268 aaKnown RBP16.35■□□□□ 0.21
CHD3-204ENST00000439235 CD300CQ08708 224 aa16.35■□□□□ 0.21
CHD3-204ENST00000439235 Q5BKY6 102 aa16.35■□□□□ 0.21
CHD3-204ENST00000439235 ARSJQ5FYB0 599 aaPredicted RBP16.35■□□□□ 0.21
CHD3-204ENST00000439235 OR10W1Q8NGF6 305 aa16.35■□□□□ 0.21
CHD3-204ENST00000439235 SMIM8Q96KF7 97 aa16.35■□□□□ 0.21
CHD3-204ENST00000439235 TMEM68Q96MH6 324 aa16.35■□□□□ 0.21
CHD3-204ENST00000439235 FAM103A1Q9BTL3 118 aaKnown RBP16.35■□□□□ 0.21
CHD3-204ENST00000439235 C11orf1Q9H5F2 150 aa16.35■□□□□ 0.21
CHD3-204ENST00000439235 PSENENQ9NZ42 101 aa16.35■□□□□ 0.21
CHD3-204ENST00000439235 ANK3Q12955 4377 aaKnown RBP16.34■□□□□ 0.21
CHD3-204ENST00000439235 FXYD6-FXYD2A0A087WZ82 144 aa16.34■□□□□ 0.21
CHD3-204ENST00000439235 G3V3Q6 166 aa16.34■□□□□ 0.21
CHD3-204ENST00000439235 TSC22D2O75157 780 aa16.34■□□□□ 0.21
CHD3-204ENST00000439235 CRYBA1P05813 215 aa16.34■□□□□ 0.21
CHD3-204ENST00000439235 OR13C7P0DN81 318 aa16.34■□□□□ 0.21
CHD3-204ENST00000439235 P2RY1P47900 373 aa16.34■□□□□ 0.21
CHD3-204ENST00000439235 CRIP2P52943 208 aaPredicted RBP16.34■□□□□ 0.21
CHD3-204ENST00000439235 TMEM267Q0VDI3 215 aaPredicted RBP16.34■□□□□ 0.21
CHD3-204ENST00000439235 OR2C3Q8N628 320 aa16.34■□□□□ 0.21
CHD3-204ENST00000439235 DCUN1D4Q92564 292 aa16.34■□□□□ 0.21
CHD3-204ENST00000439235 RNF126Q9BV68 326 aa16.34■□□□□ 0.21
CHD3-204ENST00000439235 FAM181BA6NEQ2 426 aa16.33■□□□□ 0.2
CHD3-204ENST00000439235 AP4M1O00189 453 aa16.33■□□□□ 0.2
CHD3-204ENST00000439235 IGF1P05019 195 aa16.33■□□□□ 0.2
CHD3-204ENST00000439235 SNCAP37840 140 aa16.33■□□□□ 0.2
CHD3-204ENST00000439235 HTR2BP41595 481 aa16.33■□□□□ 0.2
CHD3-204ENST00000439235 WT1-ASQ06250 92 aa16.33■□□□□ 0.2
CHD3-204ENST00000439235 ZFP69Q49AA0 526 aa16.33■□□□□ 0.2
CHD3-204ENST00000439235 SLC24A4Q8NFF2 622 aa16.33■□□□□ 0.2
CHD3-204ENST00000439235 ZNF702PQ9H963 129 aa16.33■□□□□ 0.2
CHD3-204ENST00000439235 ZNF580Q9UK33 172 aa16.33■□□□□ 0.2
CHD3-204ENST00000439235 FBXO7Q9Y3I1 522 aa16.33■□□□□ 0.2
CHD3-204ENST00000439235 U3KQ87 197 aa16.33■□□□□ 0.2
CHD3-204ENST00000439235 TMEM50AO95807 157 aa16.32■□□□□ 0.2
CHD3-204ENST00000439235 IFNA10P01566 189 aa16.32■□□□□ 0.2
CHD3-204ENST00000439235 EGR2P11161 476 aaPredicted RBP16.32■□□□□ 0.2
CHD3-204ENST00000439235 AREGP15514 252 aa16.32■□□□□ 0.2
CHD3-204ENST00000439235 NUP62P37198 522 aaPredicted RBP16.32■□□□□ 0.2
CHD3-204ENST00000439235 CAV2P51636 162 aa16.32■□□□□ 0.2
CHD3-204ENST00000439235 PAX9P55771 341 aa16.32■□□□□ 0.2
CHD3-204ENST00000439235 ATP5IP56385 69 aaPredicted RBP16.32■□□□□ 0.2
CHD3-204ENST00000439235 ECSCRQ19T08 205 aa16.32■□□□□ 0.2
CHD3-204ENST00000439235 SPANXN5Q5MJ07 72 aa16.32■□□□□ 0.2
CHD3-204ENST00000439235 UNQ5815/PRO19632Q6UWF5 114 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms