RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 CYB561A3Q8NBI2 242 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 NECAP1Q8NC96 275 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 MAPK1IP1LQ8NDC0 245 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 PLPP5Q8NEB5 264 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 OR4K14Q8NGD5 310 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 OR4P4Q8NGL7 312 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 OR9I1Q8NGQ6 314 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 OR13C4Q8NGS5 318 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 OR52P1PQ8NH57 321 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 OR5AK2Q8NH90 309 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 NEIL3Q8TAT5 605 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 PLPPR1Q8TBJ4 325 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 C15orf40Q8WUR7 153 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 THEM6Q8WUY1 208 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 EEF1AKMT1Q8WVE0 214 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 SMIM4Q8WVI0 70 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 TMEM106AQ96A25 262 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 REEP6Q96HR9 211 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 PYURFQ96I23 114 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 OR5B12Q96R08 314 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 PANX1Q96RD7 426 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 IMMP2LQ96T52 175 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 GPR22Q99680 433 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 NICN1Q9BSH3 213 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 PARP11Q9NR21 331 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 PLEKHJ1Q9NW61 149 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 RAB22AQ9UL26 194 aa3.06□□□□□ -1.92
HMGB3-203ENST00000430118 ANKRD12Q6UB98 2062 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 TRAV14DV4A0A0A6YYC5 116 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 A0A0G2JN53 185 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 TVP23AA6NH52 213 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 FAM183AA6NL82 134 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 B4DEV8 164 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 SIRPB1O00241 398 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 RBFOX2O43251 390 aaKnown RBP eCLIP3.05□□□□□ -1.92
HMGB3-203ENST00000430118 CHST1O43916 411 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 ENTPD6O75354 484 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 SERF1AO75920 110 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 OR2J3O76001 311 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 GLSO94925 669 aaPredicted RBP3.05□□□□□ -1.92
HMGB3-203ENST00000430118 NDUFB6O95139 128 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 FARS2O95363 451 aaKnown RBP3.05□□□□□ -1.92
HMGB3-203ENST00000430118 IFNA5P01569 189 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 HLA-DPB1P04440 258 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 ARG1P05089 322 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 CT62P0C5K7 136 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 ATF1P18846 271 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 F2RP25116 425 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 GDF1P27539 372 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 PSMB5P28074 263 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 SSTR5P35346 364 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 APLNRP35414 380 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 SRP14P37108 136 aaKnown RBP3.05□□□□□ -1.92
HMGB3-203ENST00000430118 SNCAP37840 140 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 RBM34P42696 430 aaKnown RBP3.05□□□□□ -1.92
HMGB3-203ENST00000430118 RPS10P46783 165 aaKnown RBP3.05□□□□□ -1.92
HMGB3-203ENST00000430118 RPS23P62266 143 aaKnown RBP3.05□□□□□ -1.92
HMGB3-203ENST00000430118 SLC25A11Q02978 314 aaKnown RBP3.05□□□□□ -1.92
HMGB3-203ENST00000430118 BAXQ07812 192 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 TMEM183BQ1AE95 376 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 Q1RN00 199 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 MRGPRG-AS1Q2M3A8 158 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 NSUN5P1Q3KNT7 163 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 SLC25A30Q5SVS4 291 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 TMEM69Q5SWH9 247 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 LDLRAD2Q5SZI1 272 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 PLCXD3Q63HM9 321 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 C22orf42Q6IC83 251 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 OR2T2Q6IF00 324 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 ADNP2Q6IQ32 1131 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 RPL22L1Q6P5R6 122 aaKnown RBP3.05□□□□□ -1.92
HMGB3-203ENST00000430118 PRSS54Q6PEW0 395 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 TMPPEQ6ZT21 453 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 MBOAT2Q6ZWT7 520 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 TMEM179BQ7Z7N9 219 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 NIT1Q86X76 327 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 CALHM3Q86XJ0 350 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 C2orf73Q8N5S3 287 aaPredicted RBP3.05□□□□□ -1.92
HMGB3-203ENST00000430118 FAM24BQ8N5W8 94 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 FAM86B1Q8N7N1 296 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 COX18Q8N8Q8 333 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 GATSQ8NAP1 163 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 LFNGQ8NES3 379 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 NOXO1Q8NFA2 376 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 OR4B1Q8NGF8 309 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 OR5A2Q8NGI9 324 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 OR5D16Q8NGK9 328 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 OR13C9Q8NGT0 318 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 OR2A1Q8NGT9 310 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 OR1P1Q8NH06 330 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 OR5AK3PQ8NH89 298 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 GEMIN6Q8WXD5 167 aaKnown RBP3.05□□□□□ -1.92
HMGB3-203ENST00000430118 PGLYRP4Q96LB8 373 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 ATOH8Q96SQ7 321 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 RNF126Q9BV68 326 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 KRTAP1-5Q9BYS1 174 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 POLR2J2Q9GZM3 115 aaKnown RBP3.05□□□□□ -1.92
HMGB3-203ENST00000430118 ATG5Q9H1Y0 275 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 REEP1Q9H902 201 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 INPP5EQ9NRR6 644 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms