RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 AKR1C4P17516 323 aa5.59□□□□□ -1.51
EPHA4-206ENST00000424339 MAS1LP35410 378 aa5.59□□□□□ -1.51
EPHA4-206ENST00000424339 C5orf64Q2M2E5 130 aa5.59□□□□□ -1.51
EPHA4-206ENST00000424339 C11orf87Q6NUJ2 197 aa5.59□□□□□ -1.51
EPHA4-206ENST00000424339 ALKAL2Q6UX46 152 aa5.59□□□□□ -1.51
EPHA4-206ENST00000424339 PPP1R27Q86WC6 154 aa5.59□□□□□ -1.51
EPHA4-206ENST00000424339 LGI3Q8N145 548 aa5.59□□□□□ -1.51
EPHA4-206ENST00000424339 FAM71E2Q8N5Q1 922 aa5.59□□□□□ -1.51
EPHA4-206ENST00000424339 C5orf56Q8N8D9 126 aa5.59□□□□□ -1.51
EPHA4-206ENST00000424339 LRTM2Q8N967 370 aa5.59□□□□□ -1.51
EPHA4-206ENST00000424339 OR1S1Q8NH92 325 aa5.59□□□□□ -1.51
EPHA4-206ENST00000424339 COQ8AQ8NI60 647 aa5.59□□□□□ -1.51
EPHA4-206ENST00000424339 ST8SIA2Q92186 375 aa5.59□□□□□ -1.51
EPHA4-206ENST00000424339 TMEM56Q96MV1 263 aa5.59□□□□□ -1.51
EPHA4-206ENST00000424339 RASL11BQ9BPW5 248 aa5.59□□□□□ -1.51
EPHA4-206ENST00000424339 PRSS22Q9GZN4 317 aa5.59□□□□□ -1.51
EPHA4-206ENST00000424339 SLC25A32Q9H2D1 315 aa5.59□□□□□ -1.51
EPHA4-206ENST00000424339 BET1LQ9NYM9 111 aa5.59□□□□□ -1.51
EPHA4-206ENST00000424339 SHPKQ9UHJ6 478 aa5.59□□□□□ -1.51
EPHA4-206ENST00000424339 ZNF580Q9UK33 172 aa5.59□□□□□ -1.51
EPHA4-206ENST00000424339 TMEM56-RWDD3S4R434 201 aa5.59□□□□□ -1.51
EPHA4-206ENST00000424339 LOC105371267A0A1B0GV96 52 aa5.58□□□□□ -1.52
EPHA4-206ENST00000424339 KRBOX1C9JBD0 128 aa5.58□□□□□ -1.52
EPHA4-206ENST00000424339 RAMP3O60896 148 aa5.58□□□□□ -1.52
EPHA4-206ENST00000424339 TSPAN9O75954 239 aa5.58□□□□□ -1.52
EPHA4-206ENST00000424339 ACTL6BO94805 426 aa5.58□□□□□ -1.52
EPHA4-206ENST00000424339 NDUFA7O95182 113 aa5.58□□□□□ -1.52
EPHA4-206ENST00000424339 SFT2D2O95562 160 aa5.58□□□□□ -1.52
EPHA4-206ENST00000424339 SLPIP03973 132 aa5.58□□□□□ -1.52
EPHA4-206ENST00000424339 RLN2P04090 185 aa5.58□□□□□ -1.52
EPHA4-206ENST00000424339 OR5AC1P0C628 307 aa5.58□□□□□ -1.52
EPHA4-206ENST00000424339 LYL1P12980 280 aa5.58□□□□□ -1.52
EPHA4-206ENST00000424339 VDAC1P21796 283 aa5.58□□□□□ -1.52
EPHA4-206ENST00000424339 NUP62P37198 522 aaPredicted RBP5.58□□□□□ -1.52
EPHA4-206ENST00000424339 LPAR6P43657 344 aa5.58□□□□□ -1.52
EPHA4-206ENST00000424339 AKR1C2P52895 323 aa5.58□□□□□ -1.52
EPHA4-206ENST00000424339 RIPPLY3P57055 190 aa5.58□□□□□ -1.52
EPHA4-206ENST00000424339 HNF4GQ14541 408 aa5.58□□□□□ -1.52
EPHA4-206ENST00000424339 PLGLAQ15195 96 aa5.58□□□□□ -1.52
EPHA4-206ENST00000424339 PSG5Q15238 335 aa5.58□□□□□ -1.52
EPHA4-206ENST00000424339 LY6EQ16553 131 aa5.58□□□□□ -1.52
EPHA4-206ENST00000424339 ZNF585BQ52M93 769 aa5.58□□□□□ -1.52
EPHA4-206ENST00000424339 LIN54Q6MZP7 749 aa5.58□□□□□ -1.52
EPHA4-206ENST00000424339 ZNF562Q6V9R5 426 aa5.58□□□□□ -1.52
EPHA4-206ENST00000424339 ZNF546Q86UE3 836 aa5.58□□□□□ -1.52
EPHA4-206ENST00000424339 LURAP1LQ8IV03 231 aa5.58□□□□□ -1.52
EPHA4-206ENST00000424339 ZNF695Q8IW36 515 aa5.58□□□□□ -1.52
EPHA4-206ENST00000424339 MMD2Q8IY49 270 aa5.58□□□□□ -1.52
EPHA4-206ENST00000424339 Q8N2B8 174 aa5.58□□□□□ -1.52
EPHA4-206ENST00000424339 Q8N9W7 124 aa5.58□□□□□ -1.52
EPHA4-206ENST00000424339 ADAD2Q8NCV1 583 aaKnown RBP5.58□□□□□ -1.52
EPHA4-206ENST00000424339 DMBX1Q8NFW5 382 aa5.58□□□□□ -1.52
EPHA4-206ENST00000424339 OR4F5Q8NH21 305 aa5.58□□□□□ -1.52
EPHA4-206ENST00000424339 GLYATL2Q8WU03 294 aa5.58□□□□□ -1.52
EPHA4-206ENST00000424339 LSM10Q969L4 123 aaKnown RBP5.58□□□□□ -1.52
EPHA4-206ENST00000424339 TMEM230Q96A57 120 aa5.58□□□□□ -1.52
EPHA4-206ENST00000424339 R3HDM4Q96D70 268 aa5.58□□□□□ -1.52
EPHA4-206ENST00000424339 RRNAD1Q96FB5 475 aaKnown RBP5.58□□□□□ -1.52
EPHA4-206ENST00000424339 PHYHIPLQ96FC7 376 aa5.58□□□□□ -1.52
EPHA4-206ENST00000424339 LINC00052Q96N35 136 aa5.58□□□□□ -1.52
EPHA4-206ENST00000424339 TP53RKQ96S44 253 aa5.58□□□□□ -1.52
EPHA4-206ENST00000424339 PHB2Q99623 299 aa5.58□□□□□ -1.52
EPHA4-206ENST00000424339 SRSF8Q9BRL6 282 aaKnown RBP5.58□□□□□ -1.52
EPHA4-206ENST00000424339 ESM1Q9NQ30 184 aa5.58□□□□□ -1.52
EPHA4-206ENST00000424339 FKBP11Q9NYL4 201 aa5.58□□□□□ -1.52
EPHA4-206ENST00000424339 SIGLEC9Q9Y336 463 aa5.58□□□□□ -1.52
EPHA4-206ENST00000424339 TMED3Q9Y3Q3 217 aa5.58□□□□□ -1.52
EPHA4-206ENST00000424339 SOX21Q9Y651 276 aaPredicted RBP5.58□□□□□ -1.52
EPHA4-206ENST00000424339 CCSO14618 274 aa5.57□□□□□ -1.52
EPHA4-206ENST00000424339 SLC25A17O43808 307 aa5.57□□□□□ -1.52
EPHA4-206ENST00000424339 SCO1O75880 301 aa5.57□□□□□ -1.52
EPHA4-206ENST00000424339 KBTBD11O94819 623 aa5.57□□□□□ -1.52
EPHA4-206ENST00000424339 S1PR2O95136 353 aa5.57□□□□□ -1.52
EPHA4-206ENST00000424339 IGLV2-23P01705 113 aa5.57□□□□□ -1.52
EPHA4-206ENST00000424339 IGHG2P01859 326 aa5.57□□□□□ -1.52
EPHA4-206ENST00000424339 SAA1P0DJI8 122 aaPredicted RBP5.57□□□□□ -1.52
EPHA4-206ENST00000424339 SLC25A6P12236 298 aa5.57□□□□□ -1.52
EPHA4-206ENST00000424339 CD24P25063 80 aa5.57□□□□□ -1.52
EPHA4-206ENST00000424339 PAX6P26367 422 aa5.57□□□□□ -1.52
EPHA4-206ENST00000424339 BRWD1-AS2P59051 145 aa5.57□□□□□ -1.52
EPHA4-206ENST00000424339 SUPT4H1P63272 117 aaKnown RBP5.57□□□□□ -1.52
EPHA4-206ENST00000424339 TMEM187Q14656 261 aa5.57□□□□□ -1.52
EPHA4-206ENST00000424339 OR2B11Q5JQS5 317 aa5.57□□□□□ -1.52
EPHA4-206ENST00000424339 OR4A47Q6IF82 309 aa5.57□□□□□ -1.52
EPHA4-206ENST00000424339 ACOT7LQ6ZUV0 252 aa5.57□□□□□ -1.52
EPHA4-206ENST00000424339 H2BFWTQ7Z2G1 175 aa5.57□□□□□ -1.52
EPHA4-206ENST00000424339 TMEM219Q86XT9 240 aa5.57□□□□□ -1.52
EPHA4-206ENST00000424339 FOXRED2Q8IWF2 684 aa5.57□□□□□ -1.52
EPHA4-206ENST00000424339 PUSL1Q8N0Z8 303 aaKnown RBP5.57□□□□□ -1.52
EPHA4-206ENST00000424339 OR5B3Q8NH48 314 aa5.57□□□□□ -1.52
EPHA4-206ENST00000424339 OR2T6Q8NHC8 308 aa5.57□□□□□ -1.52
EPHA4-206ENST00000424339 RNASE11Q8TAA1 199 aaKnown RBP5.57□□□□□ -1.52
EPHA4-206ENST00000424339 STOML3Q8TAV4 291 aa5.57□□□□□ -1.52
EPHA4-206ENST00000424339 TMEM167AQ8TBQ9 72 aa5.57□□□□□ -1.52
EPHA4-206ENST00000424339 PPP1R1CQ8WVI7 109 aa5.57□□□□□ -1.52
EPHA4-206ENST00000424339 TMEM68Q96MH6 324 aa5.57□□□□□ -1.52
EPHA4-206ENST00000424339 C8orf49Q96NF6 230 aa5.57□□□□□ -1.52
EPHA4-206ENST00000424339 SPIN2AQ99865 258 aa5.57□□□□□ -1.52
EPHA4-206ENST00000424339 SPIN2BQ9BPZ2 258 aa5.57□□□□□ -1.52
EPHA4-206ENST00000424339 NMES1Q9C002 83 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms