RNA–Protein interactions for RNA: ENST00000420047.1

SEMA3A-202, Transcript of semaphorin 3A, humanhuman

TSL 4

Gene SEMA3A, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-202ENST00000420047 CNIH1O95406 144 aa2.59□□□□□ -1.99
SEMA3A-202ENST00000420047 BRI3O95415 125 aa2.59□□□□□ -1.99
SEMA3A-202ENST00000420047 DUS4LO95620 317 aaKnown RBP2.59□□□□□ -1.99
SEMA3A-202ENST00000420047 HLA-DRB1P01911 266 aa2.59□□□□□ -1.99
SEMA3A-202ENST00000420047 HSPB1P04792 205 aaKnown RBP2.59□□□□□ -1.99
SEMA3A-202ENST00000420047 REG1AP05451 166 aa2.59□□□□□ -1.99
SEMA3A-202ENST00000420047 TFAP2AP05549 437 aa2.59□□□□□ -1.99
SEMA3A-202ENST00000420047 GLAP06280 429 aa2.59□□□□□ -1.99
SEMA3A-202ENST00000420047 CSN3P07498 182 aa2.59□□□□□ -1.99
SEMA3A-202ENST00000420047 FCGR3AP08637 254 aa2.59□□□□□ -1.99
SEMA3A-202ENST00000420047 CD7P09564 240 aa2.59□□□□□ -1.99
SEMA3A-202ENST00000420047 GATA2P23769 480 aaPredicted RBP2.59□□□□□ -1.99
SEMA3A-202ENST00000420047 TAS2R43P59537 309 aa2.59□□□□□ -1.99
SEMA3A-202ENST00000420047 RAB11BQ15907 218 aa2.59□□□□□ -1.99
SEMA3A-202ENST00000420047 ACTBL2Q562R1 376 aa2.59□□□□□ -1.99
SEMA3A-202ENST00000420047 GGNBP1Q5YKI7 109 aa2.59□□□□□ -1.99
SEMA3A-202ENST00000420047 ZNF660Q6AZW8 331 aaPredicted RBP2.59□□□□□ -1.99
SEMA3A-202ENST00000420047 IZUMO2Q6UXV1 221 aa2.59□□□□□ -1.99
SEMA3A-202ENST00000420047 SSX9Q7RTT3 188 aa2.59□□□□□ -1.99
SEMA3A-202ENST00000420047 LINC00596Q86U02 117 aa2.59□□□□□ -1.99
SEMA3A-202ENST00000420047 CDH26Q8IXH8 852 aa2.59□□□□□ -1.99
SEMA3A-202ENST00000420047 MS4A15Q8N5U1 240 aa2.59□□□□□ -1.99
SEMA3A-202ENST00000420047 COMMD1Q8N668 190 aa2.59□□□□□ -1.99
SEMA3A-202ENST00000420047 PACRGLQ8N7B6 248 aa2.59□□□□□ -1.99
SEMA3A-202ENST00000420047 OR10R2Q8NGX6 335 aa2.59□□□□□ -1.99
SEMA3A-202ENST00000420047 CACNG8Q8WXS5 425 aa2.59□□□□□ -1.99
SEMA3A-202ENST00000420047 UFD1Q92890 307 aa2.59□□□□□ -1.99
SEMA3A-202ENST00000420047 CPNE2Q96FN4 548 aaPredicted RBP2.59□□□□□ -1.99
SEMA3A-202ENST00000420047 RCHY1Q96PM5 261 aa2.59□□□□□ -1.99
SEMA3A-202ENST00000420047 UQCC2Q9BRT2 126 aa2.59□□□□□ -1.99
SEMA3A-202ENST00000420047 DCUN1D5Q9BTE7 237 aa2.59□□□□□ -1.99
SEMA3A-202ENST00000420047 ATG5Q9H1Y0 275 aa2.59□□□□□ -1.99
SEMA3A-202ENST00000420047 OR2D2Q9H210 308 aa2.59□□□□□ -1.99
SEMA3A-202ENST00000420047 SPACA1Q9HBV2 294 aa2.59□□□□□ -1.99
SEMA3A-202ENST00000420047 ISYNA1Q9NPH2 558 aa2.59□□□□□ -1.99
SEMA3A-202ENST00000420047 CCL28Q9NRJ3 127 aa2.59□□□□□ -1.99
SEMA3A-202ENST00000420047 SCN3BQ9NY72 215 aa2.59□□□□□ -1.99
SEMA3A-202ENST00000420047 ABRACLQ9P1F3 81 aa2.59□□□□□ -1.99
SEMA3A-202ENST00000420047 CACNG5Q9UF02 275 aa2.59□□□□□ -1.99
SEMA3A-202ENST00000420047 HSF4Q9ULV5 492 aa2.59□□□□□ -1.99
SEMA3A-202ENST00000420047 SPATA2Q9UM82 520 aa2.59□□□□□ -1.99
SEMA3A-202ENST00000420047 FOXA2Q9Y261 457 aaPredicted RBP2.59□□□□□ -1.99
SEMA3A-202ENST00000420047 WASHC3Q9Y3C0 194 aa2.59□□□□□ -1.99
SEMA3A-202ENST00000420047 COL7A1Q02388 2944 aa2.58□□□□□ -2
SEMA3A-202ENST00000420047 TRBV6-7A0A0A0MS04 114 aa2.58□□□□□ -2
SEMA3A-202ENST00000420047 TRBV6-6A0A0A6YYG2 114 aa2.58□□□□□ -2
SEMA3A-202ENST00000420047 RBMY1BA6NDE4 496 aaKnown RBP2.58□□□□□ -2
SEMA3A-202ENST00000420047 RBMY1EA6NEQ0 496 aaKnown RBP2.58□□□□□ -2
SEMA3A-202ENST00000420047 TMEM235A6NFC5 223 aa2.58□□□□□ -2
SEMA3A-202ENST00000420047 MFNGO00587 321 aa2.58□□□□□ -2
SEMA3A-202ENST00000420047 RAMP3O60896 148 aa2.58□□□□□ -2
SEMA3A-202ENST00000420047 FCGR3BO75015 233 aa2.58□□□□□ -2
SEMA3A-202ENST00000420047 CRYZL1O95825 349 aa2.58□□□□□ -2
SEMA3A-202ENST00000420047 LGALS1P09382 135 aaKnown RBP2.58□□□□□ -2
SEMA3A-202ENST00000420047 OR8U8P0C7N1 319 aa2.58□□□□□ -2
SEMA3A-202ENST00000420047 RBMY1DP0C7P1 496 aaKnown RBP2.58□□□□□ -2
SEMA3A-202ENST00000420047 ZBTB25P24278 435 aa2.58□□□□□ -2
SEMA3A-202ENST00000420047 DUTP33316 252 aaKnown RBP2.58□□□□□ -2
SEMA3A-202ENST00000420047 SDC2P34741 201 aa2.58□□□□□ -2
SEMA3A-202ENST00000420047 LSM3P62310 102 aaKnown RBP2.58□□□□□ -2
SEMA3A-202ENST00000420047 RPP30P78346 268 aaKnown RBP2.58□□□□□ -2
SEMA3A-202ENST00000420047 RUNX1Q01196 453 aa2.58□□□□□ -2
SEMA3A-202ENST00000420047 EWSR1Q01844 656 aaKnown RBP eCLIP2.58□□□□□ -2
SEMA3A-202ENST00000420047 MLLT11Q13015 90 aaPredicted RBP2.58□□□□□ -2
SEMA3A-202ENST00000420047 MED21Q13503 144 aa2.58□□□□□ -2
SEMA3A-202ENST00000420047 ARFRP1Q13795 201 aa2.58□□□□□ -2
SEMA3A-202ENST00000420047 KLF5Q13887 457 aaPredicted RBP2.58□□□□□ -2
SEMA3A-202ENST00000420047 TNXAQ16473 311 aa2.58□□□□□ -2
SEMA3A-202ENST00000420047 HAGHQ16775 308 aa2.58□□□□□ -2
SEMA3A-202ENST00000420047 AKIRIN2Q53H80 203 aa2.58□□□□□ -2
SEMA3A-202ENST00000420047 CASC10Q5T4H9 136 aa2.58□□□□□ -2
SEMA3A-202ENST00000420047 RNLSQ5VYX0 342 aa2.58□□□□□ -2
SEMA3A-202ENST00000420047 TRAT1Q6PIZ9 186 aa2.58□□□□□ -2
SEMA3A-202ENST00000420047 ZNF562Q6V9R5 426 aa2.58□□□□□ -2
SEMA3A-202ENST00000420047 PRSS48Q7RTY5 328 aa2.58□□□□□ -2
SEMA3A-202ENST00000420047 H1FOOQ8IZA3 346 aaPredicted RBP2.58□□□□□ -2
SEMA3A-202ENST00000420047 DEFB125Q8N687 156 aa2.58□□□□□ -2
SEMA3A-202ENST00000420047 NKAIN3Q8N8D7 197 aa2.58□□□□□ -2
SEMA3A-202ENST00000420047 OR10W1Q8NGF6 305 aa2.58□□□□□ -2
SEMA3A-202ENST00000420047 OR8H1Q8NGG4 311 aa2.58□□□□□ -2
SEMA3A-202ENST00000420047 ACOT12Q8WYK0 555 aa2.58□□□□□ -2
SEMA3A-202ENST00000420047 PHYHIPQ92561 330 aa2.58□□□□□ -2
SEMA3A-202ENST00000420047 PTX4Q96A99 478 aa2.58□□□□□ -2
SEMA3A-202ENST00000420047 FLYWCH2Q96CP2 140 aaKnown RBP2.58□□□□□ -2
SEMA3A-202ENST00000420047 RAB3CQ96E17 227 aa2.58□□□□□ -2
SEMA3A-202ENST00000420047 OR4C12Q96R67 309 aa2.58□□□□□ -2
SEMA3A-202ENST00000420047 MYCBPQ99417 103 aaPredicted RBP2.58□□□□□ -2
SEMA3A-202ENST00000420047 PHB2Q99623 299 aa2.58□□□□□ -2
SEMA3A-202ENST00000420047 URM1Q9BTM9 101 aaKnown RBP2.58□□□□□ -2
SEMA3A-202ENST00000420047 CENPOQ9BU64 300 aa2.58□□□□□ -2
SEMA3A-202ENST00000420047 GON7Q9BXV9 100 aa2.58□□□□□ -2
SEMA3A-202ENST00000420047 CST11Q9H112 138 aa2.58□□□□□ -2
SEMA3A-202ENST00000420047 ZNF430Q9H8G1 570 aaPredicted RBP2.58□□□□□ -2
SEMA3A-202ENST00000420047 PLEKHA3Q9HB20 300 aa2.58□□□□□ -2
SEMA3A-202ENST00000420047 ACOT13Q9NPJ3 140 aa2.58□□□□□ -2
SEMA3A-202ENST00000420047 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.58□□□□□ -2
SEMA3A-202ENST00000420047 TXNL4BQ9NX01 149 aaKnown RBP2.58□□□□□ -2
SEMA3A-202ENST00000420047 COA4Q9NYJ1 87 aa2.58□□□□□ -2
SEMA3A-202ENST00000420047 PIPOXQ9P0Z9 390 aa2.58□□□□□ -2
SEMA3A-202ENST00000420047 GHRLQ9UBU3 117 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms