RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 IGHV3OR16-10A0A075B7F0 116 aa11.35□□□□□ -0.59
SHMT1P1-201ENST00000419974 L7N2F9 121 aa11.35□□□□□ -0.59
SHMT1P1-201ENST00000419974 SSSCA1O60232 199 aa11.35□□□□□ -0.59
SHMT1P1-201ENST00000419974 RPL12P30050 165 aaKnown RBP11.35□□□□□ -0.59
SHMT1P1-201ENST00000419974 S100A11P31949 105 aa11.35□□□□□ -0.59
SHMT1P1-201ENST00000419974 IER3P46695 156 aa11.35□□□□□ -0.59
SHMT1P1-201ENST00000419974 VAMP2P63027 116 aa11.35□□□□□ -0.59
SHMT1P1-201ENST00000419974 SSBP2P81877 361 aaPredicted RBP11.35□□□□□ -0.59
SHMT1P1-201ENST00000419974 SCGB2A2Q13296 93 aa11.35□□□□□ -0.59
SHMT1P1-201ENST00000419974 HES1Q14469 280 aa11.35□□□□□ -0.59
SHMT1P1-201ENST00000419974 FAM120AOSQ5T036 256 aa11.35□□□□□ -0.59
SHMT1P1-201ENST00000419974 PVRIGQ6DKI7 326 aa11.35□□□□□ -0.59
SHMT1P1-201ENST00000419974 TMEM86BQ8N661 226 aa11.35□□□□□ -0.59
SHMT1P1-201ENST00000419974 TMEM252Q8N6L7 170 aa11.35□□□□□ -0.59
SHMT1P1-201ENST00000419974 ZNF114Q8NC26 417 aa11.35□□□□□ -0.59
SHMT1P1-201ENST00000419974 MAGT1Q9H0U3 335 aa11.35□□□□□ -0.59
SHMT1P1-201ENST00000419974 HIPK2Q9H2X6 1198 aa11.35□□□□□ -0.59
SHMT1P1-201ENST00000419974 CGB1A6NKQ9 187 aa11.34□□□□□ -0.59
SHMT1P1-201ENST00000419974 ACTL6BO94805 426 aa11.34□□□□□ -0.59
SHMT1P1-201ENST00000419974 DEFB112Q30KQ8 113 aa11.34□□□□□ -0.59
SHMT1P1-201ENST00000419974 PRIMA1Q86XR5 153 aa11.34□□□□□ -0.59
SHMT1P1-201ENST00000419974 GRPEL2Q8TAA5 225 aa11.34□□□□□ -0.59
SHMT1P1-201ENST00000419974 CLCC1Q96S66 551 aa11.34□□□□□ -0.59
SHMT1P1-201ENST00000419974 TPSG1Q9NRR2 321 aa11.34□□□□□ -0.59
SHMT1P1-201ENST00000419974 PSENENQ9NZ42 101 aa11.34□□□□□ -0.59
SHMT1P1-201ENST00000419974 ZNF580Q9UK33 172 aa11.34□□□□□ -0.59
SHMT1P1-201ENST00000419974 MOB4Q9Y3A3 225 aa11.34□□□□□ -0.59
SHMT1P1-201ENST00000419974 MXRA5Q9NR99 2828 aa11.34□□□□□ -0.59
SHMT1P1-201ENST00000419974 MSGN1A6NI15 193 aa11.33□□□□□ -0.6
SHMT1P1-201ENST00000419974 CEBPZOSA8MTT3 80 aa11.33□□□□□ -0.6
SHMT1P1-201ENST00000419974 HNF1AP20823 631 aa11.33□□□□□ -0.6
SHMT1P1-201ENST00000419974 CD24P25063 80 aa11.33□□□□□ -0.6
SHMT1P1-201ENST00000419974 PAX6P26367 422 aa11.33□□□□□ -0.6
SHMT1P1-201ENST00000419974 HTR2BP41595 481 aa11.33□□□□□ -0.6
SHMT1P1-201ENST00000419974 SULT1A1P50225 295 aa11.33□□□□□ -0.6
SHMT1P1-201ENST00000419974 CRIP2P52943 208 aaPredicted RBP11.33□□□□□ -0.6
SHMT1P1-201ENST00000419974 NKX2-5P52952 324 aaPredicted RBP11.33□□□□□ -0.6
SHMT1P1-201ENST00000419974 PJVKQ0ZLH3 352 aa11.33□□□□□ -0.6
SHMT1P1-201ENST00000419974 HNF4GQ14541 408 aa11.33□□□□□ -0.6
SHMT1P1-201ENST00000419974 KLK9Q2XQG4 91 aa11.33□□□□□ -0.6
SHMT1P1-201ENST00000419974 FBLN7Q53RD9 439 aa11.33□□□□□ -0.6
SHMT1P1-201ENST00000419974 TMUB2Q71RG4 321 aa11.33□□□□□ -0.6
SHMT1P1-201ENST00000419974 C5orf56Q8N8D9 126 aa11.33□□□□□ -0.6
SHMT1P1-201ENST00000419974 ZDHHC16Q969W1 377 aa11.33□□□□□ -0.6
SHMT1P1-201ENST00000419974 GGACTQ9BVM4 153 aa11.33□□□□□ -0.6
SHMT1P1-201ENST00000419974 GON7Q9BXV9 100 aa11.33□□□□□ -0.6
SHMT1P1-201ENST00000419974 FBXL15Q9H469 300 aa11.33□□□□□ -0.6
SHMT1P1-201ENST00000419974 PLEKHA3Q9HB20 300 aa11.33□□□□□ -0.6
SHMT1P1-201ENST00000419974 KLK9Q9UKQ9 250 aa11.33□□□□□ -0.6
SHMT1P1-201ENST00000419974 HSPB11Q9Y547 144 aa11.33□□□□□ -0.6
SHMT1P1-201ENST00000419974 A0A1B0GW64 132 aa11.32□□□□□ -0.6
SHMT1P1-201ENST00000419974 PMS2P5A8MQ11 134 aa11.32□□□□□ -0.6
SHMT1P1-201ENST00000419974 FCN1O00602 326 aa11.32□□□□□ -0.6
SHMT1P1-201ENST00000419974 TSPAN9O75954 239 aa11.32□□□□□ -0.6
SHMT1P1-201ENST00000419974 RPL27AP46776 148 aaKnown RBP11.32□□□□□ -0.6
SHMT1P1-201ENST00000419974 ERHP84090 104 aaKnown RBP11.32□□□□□ -0.6
SHMT1P1-201ENST00000419974 EWSR1Q01844 656 aaKnown RBP eCLIP11.32□□□□□ -0.6
SHMT1P1-201ENST00000419974 C2orf83Q53S99 150 aa11.32□□□□□ -0.6
SHMT1P1-201ENST00000419974 STX12Q86Y82 276 aa11.32□□□□□ -0.6
SHMT1P1-201ENST00000419974 BCL6BQ8N143 479 aaPredicted RBP11.32□□□□□ -0.6
SHMT1P1-201ENST00000419974 SSMEM1Q8WWF3 244 aa11.32□□□□□ -0.6
SHMT1P1-201ENST00000419974 RBMXL1Q96E39 390 aaKnown RBP11.32□□□□□ -0.6
SHMT1P1-201ENST00000419974 TMEM68Q96MH6 324 aa11.32□□□□□ -0.6
SHMT1P1-201ENST00000419974 ENY2Q9NPA8 101 aa11.32□□□□□ -0.6
SHMT1P1-201ENST00000419974 YAE1D1Q9NRH1 226 aa11.32□□□□□ -0.6
SHMT1P1-201ENST00000419974 STRAPQ9Y3F4 350 aaKnown RBP11.32□□□□□ -0.6
SHMT1P1-201ENST00000419974 IGLC7A0M8Q6 106 aa11.31□□□□□ -0.6
SHMT1P1-201ENST00000419974 IGSF23A1L1A6 192 aa11.31□□□□□ -0.6
SHMT1P1-201ENST00000419974 NCBP2LA6PVI3 153 aaKnown RBP11.31□□□□□ -0.6
SHMT1P1-201ENST00000419974 TEX22C9J3V5 150 aa11.31□□□□□ -0.6
SHMT1P1-201ENST00000419974 E7EUB6 86 aa11.31□□□□□ -0.6
SHMT1P1-201ENST00000419974 FNDC10F2Z333 226 aa11.31□□□□□ -0.6
SHMT1P1-201ENST00000419974 H3BUX3 64 aa11.31□□□□□ -0.6
SHMT1P1-201ENST00000419974 BCL2L11O43521 198 aa11.31□□□□□ -0.6
SHMT1P1-201ENST00000419974 CA2P00918 260 aa11.31□□□□□ -0.6
SHMT1P1-201ENST00000419974 AMY1AP04745 511 aa11.31□□□□□ -0.6
SHMT1P1-201ENST00000419974 CAV2P51636 162 aa11.31□□□□□ -0.6
SHMT1P1-201ENST00000419974 CX3CL1P78423 397 aa11.31□□□□□ -0.6
SHMT1P1-201ENST00000419974 PLGLAQ15195 96 aa11.31□□□□□ -0.6
SHMT1P1-201ENST00000419974 SRSF12Q8WXF0 261 aaKnown RBP11.31□□□□□ -0.6
SHMT1P1-201ENST00000419974 RASL11BQ9BPW5 248 aa11.31□□□□□ -0.6
SHMT1P1-201ENST00000419974 SLC25A33Q9BSK2 321 aa11.31□□□□□ -0.6
SHMT1P1-201ENST00000419974 ARL6Q9H0F7 186 aa11.31□□□□□ -0.6
SHMT1P1-201ENST00000419974 HEYLQ9NQ87 328 aaPredicted RBP11.31□□□□□ -0.6
SHMT1P1-201ENST00000419974 IGHV7-81A0A0B4J1V7 117 aa11.3□□□□□ -0.6
SHMT1P1-201ENST00000419974 FAM24AA6NFZ4 105 aa11.3□□□□□ -0.6
SHMT1P1-201ENST00000419974 C15orf62A8K5M9 175 aa11.3□□□□□ -0.6
SHMT1P1-201ENST00000419974 CRYGCP07315 174 aa11.3□□□□□ -0.6
SHMT1P1-201ENST00000419974 IAPPP10997 89 aa11.3□□□□□ -0.6
SHMT1P1-201ENST00000419974 HOXA1P49639 335 aaPredicted RBP11.3□□□□□ -0.6
SHMT1P1-201ENST00000419974 SUB1P53999 127 aaKnown RBP eCLIP11.3□□□□□ -0.6
SHMT1P1-201ENST00000419974 HBG1P69891 147 aa11.3□□□□□ -0.6
SHMT1P1-201ENST00000419974 HBG2P69892 147 aa11.3□□□□□ -0.6
SHMT1P1-201ENST00000419974 WT1-ASQ06250 92 aa11.3□□□□□ -0.6
SHMT1P1-201ENST00000419974 OPCMLQ14982 345 aa11.3□□□□□ -0.6
SHMT1P1-201ENST00000419974 TNXAQ16473 311 aa11.3□□□□□ -0.6
SHMT1P1-201ENST00000419974 ATP6V1FQ16864 119 aa11.3□□□□□ -0.6
SHMT1P1-201ENST00000419974 SLC51BQ86UW2 128 aa11.3□□□□□ -0.6
SHMT1P1-201ENST00000419974 SLC24A4Q8NFF2 622 aa11.3□□□□□ -0.6
SHMT1P1-201ENST00000419974 OR1L6Q8NGR2 347 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 173.8 ms