RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 AKR1C1Q04828 323 aa13.53□□□□□ -0.24
SSBP3-205ENST00000417664 VMO1Q7Z5L0 202 aa13.53□□□□□ -0.24
SSBP3-205ENST00000417664 SIRPDQ9H106 197 aa13.53□□□□□ -0.24
SSBP3-205ENST00000417664 TNCP24821 2201 aa13.53□□□□□ -0.24
SSBP3-205ENST00000417664 IGHV3-72A0A0B4J1Y9 119 aa13.52□□□□□ -0.25
SSBP3-205ENST00000417664 F8W036 122 aa13.52□□□□□ -0.25
SSBP3-205ENST00000417664 MYOD1P15172 320 aa13.52□□□□□ -0.25
SSBP3-205ENST00000417664 SUB1P53999 127 aaKnown RBP eCLIP13.52□□□□□ -0.25
SSBP3-205ENST00000417664 TREML4Q6UXN2 200 aa13.52□□□□□ -0.25
SSBP3-205ENST00000417664 FAM168AQ92567 244 aa13.52□□□□□ -0.25
SSBP3-205ENST00000417664 SCRT1Q9BWW7 348 aa13.52□□□□□ -0.25
SSBP3-205ENST00000417664 EIF5A2Q9GZV4 153 aaKnown RBP13.52□□□□□ -0.25
SSBP3-205ENST00000417664 ACTL6BO94805 426 aa13.51□□□□□ -0.25
SSBP3-205ENST00000417664 LCN2P80188 198 aa13.51□□□□□ -0.25
SSBP3-205ENST00000417664 RAB31Q13636 194 aa13.51□□□□□ -0.25
SSBP3-205ENST00000417664 PMS2P11Q13670 270 aa13.51□□□□□ -0.25
SSBP3-205ENST00000417664 PSG5Q15238 335 aa13.51□□□□□ -0.25
SSBP3-205ENST00000417664 PRSS8Q16651 343 aa13.51□□□□□ -0.25
SSBP3-205ENST00000417664 SVBPQ8N300 66 aa13.51□□□□□ -0.25
SSBP3-205ENST00000417664 RCC1LQ96I51 464 aaKnown RBP13.51□□□□□ -0.25
SSBP3-205ENST00000417664 TMEM231Q9H6L2 316 aa13.51□□□□□ -0.25
SSBP3-205ENST00000417664 SIGLEC9Q9Y336 463 aa13.51□□□□□ -0.25
SSBP3-205ENST00000417664 FAM96BQ9Y3D0 163 aa13.51□□□□□ -0.25
SSBP3-205ENST00000417664 LSM4Q9Y4Z0 139 aaKnown RBP13.51□□□□□ -0.25
SSBP3-205ENST00000417664 DCHS2Q6V1P9 2916 aa13.51□□□□□ -0.25
SSBP3-205ENST00000417664 SMCO3A2RU48 225 aa13.5□□□□□ -0.25
SSBP3-205ENST00000417664 FAM157AC9JC47 383 aa13.5□□□□□ -0.25
SSBP3-205ENST00000417664 OPN1MWP04001 364 aa13.5□□□□□ -0.25
SSBP3-205ENST00000417664 OPN1MW2P0DN77 364 aa13.5□□□□□ -0.25
SSBP3-205ENST00000417664 OPN1MW3P0DN78 364 aa13.5□□□□□ -0.25
SSBP3-205ENST00000417664 RNASE2P10153 161 aaKnown RBP13.5□□□□□ -0.25
SSBP3-205ENST00000417664 COX6B1P14854 86 aa13.5□□□□□ -0.25
SSBP3-205ENST00000417664 M6PRP20645 277 aa13.5□□□□□ -0.25
SSBP3-205ENST00000417664 OPRK1P41145 380 aa13.5□□□□□ -0.25
SSBP3-205ENST00000417664 PRB3Q04118 309 aaPredicted RBP13.5□□□□□ -0.25
SSBP3-205ENST00000417664 ACOT6Q3I5F7 207 aaPredicted RBP13.5□□□□□ -0.25
SSBP3-205ENST00000417664 FFAR4Q5NUL3 377 aa13.5□□□□□ -0.25
SSBP3-205ENST00000417664 TEPPQ6URK8 271 aa13.5□□□□□ -0.25
SSBP3-205ENST00000417664 CLEC2AQ6UVW9 174 aa13.5□□□□□ -0.25
SSBP3-205ENST00000417664 CACNG8Q8WXS5 425 aa13.5□□□□□ -0.25
SSBP3-205ENST00000417664 TBL2Q9Y4P3 447 aaKnown RBP13.5□□□□□ -0.25
SSBP3-205ENST00000417664 SPTAN1Q13813 2472 aaKnown RBP13.5□□□□□ -0.25
SSBP3-205ENST00000417664 RBFOX3A6NFN3 312 aa13.5□□□□□ -0.25
SSBP3-205ENST00000417664 TIMM23O14925 209 aa13.5□□□□□ -0.25
SSBP3-205ENST00000417664 VENTXO95231 258 aa13.5□□□□□ -0.25
SSBP3-205ENST00000417664 SFTA3P0C7M3 94 aa13.5□□□□□ -0.25
SSBP3-205ENST00000417664 PAX1P15863 534 aa13.5□□□□□ -0.25
SSBP3-205ENST00000417664 HOXB4P17483 251 aaPredicted RBP13.5□□□□□ -0.25
SSBP3-205ENST00000417664 ELLP55199 621 aaPredicted RBP13.5□□□□□ -0.25
SSBP3-205ENST00000417664 LGALS4P56470 323 aa13.5□□□□□ -0.25
SSBP3-205ENST00000417664 PPP1R27Q86WC6 154 aa13.5□□□□□ -0.25
SSBP3-205ENST00000417664 RNASEH2CQ8TDP1 164 aaKnown RBP13.5□□□□□ -0.25
SSBP3-205ENST00000417664 C10orf105Q8TEF2 133 aa13.5□□□□□ -0.25
SSBP3-205ENST00000417664 RITA1Q96K30 269 aa13.5□□□□□ -0.25
SSBP3-205ENST00000417664 VSIRQ9H7M9 311 aa13.5□□□□□ -0.25
SSBP3-205ENST00000417664 SLC39A9Q9NUM3 307 aa13.5□□□□□ -0.25
SSBP3-205ENST00000417664 USP9XQ93008 2570 aaPredicted RBP13.49□□□□□ -0.25
SSBP3-205ENST00000417664 CTXND1A0A1B0GTU2 59 aa13.49□□□□□ -0.25
SSBP3-205ENST00000417664 CYB5BO43169 146 aa13.49□□□□□ -0.25
SSBP3-205ENST00000417664 TOX4O94842 621 aa13.49□□□□□ -0.25
SSBP3-205ENST00000417664 ADCYAP1P18509 176 aa13.49□□□□□ -0.25
SSBP3-205ENST00000417664 GPX4P36969 197 aaPredicted RBP13.49□□□□□ -0.25
SSBP3-205ENST00000417664 UBE2E1P51965 193 aa13.49□□□□□ -0.25
SSBP3-205ENST00000417664 ATP5J2P56134 94 aa13.49□□□□□ -0.25
SSBP3-205ENST00000417664 DSCR9P59020 149 aa13.49□□□□□ -0.25
SSBP3-205ENST00000417664 DEFA5Q01523 94 aa13.49□□□□□ -0.25
SSBP3-205ENST00000417664 KLRD1Q13241 179 aa13.49□□□□□ -0.25
SSBP3-205ENST00000417664 MRGPRG-AS1Q2M3A8 158 aa13.49□□□□□ -0.25
SSBP3-205ENST00000417664 ARSJQ5FYB0 599 aaPredicted RBP13.49□□□□□ -0.25
SSBP3-205ENST00000417664 LDLRAD2Q5SZI1 272 aa13.49□□□□□ -0.25
SSBP3-205ENST00000417664 ACSM6Q6P461 480 aa13.49□□□□□ -0.25
SSBP3-205ENST00000417664 RPP25LQ8N5L8 163 aaKnown RBP13.49□□□□□ -0.25
SSBP3-205ENST00000417664 OR10W1Q8NGF6 305 aa13.49□□□□□ -0.25
SSBP3-205ENST00000417664 OR10G4Q8NGN3 311 aa13.49□□□□□ -0.25
SSBP3-205ENST00000417664 OR10G9Q8NGN4 311 aa13.49□□□□□ -0.25
SSBP3-205ENST00000417664 OR10G7Q8NGN6 311 aa13.49□□□□□ -0.25
SSBP3-205ENST00000417664 CFHR4Q92496 578 aa13.49□□□□□ -0.25
SSBP3-205ENST00000417664 ACTR3CQ9C0K3 210 aaPredicted RBP13.49□□□□□ -0.25
SSBP3-205ENST00000417664 METTL1Q9UBP6 276 aaKnown RBP13.49□□□□□ -0.25
SSBP3-205ENST00000417664 CGB1A6NKQ9 187 aa13.48□□□□□ -0.25
SSBP3-205ENST00000417664 VWC2LB2RUY7 222 aa13.48□□□□□ -0.25
SSBP3-205ENST00000417664 RPL27AP46776 148 aaKnown RBP13.48□□□□□ -0.25
SSBP3-205ENST00000417664 CCL20P78556 96 aa13.48□□□□□ -0.25
SSBP3-205ENST00000417664 ZNF726P1Q15940 193 aa13.48□□□□□ -0.25
SSBP3-205ENST00000417664 ZNF787Q6DD87 383 aa13.48□□□□□ -0.25
SSBP3-205ENST00000417664 TMEM144Q7Z5S9 345 aa13.48□□□□□ -0.25
SSBP3-205ENST00000417664 SRSF8Q9BRL6 282 aaKnown RBP13.48□□□□□ -0.25
SSBP3-205ENST00000417664 SLC35B3Q9H1N7 401 aa13.48□□□□□ -0.25
SSBP3-205ENST00000417664 LPAR2Q9HBW0 351 aa13.48□□□□□ -0.25
SSBP3-205ENST00000417664 ZFYVE26Q68DK2 2539 aa13.48□□□□□ -0.25
SSBP3-205ENST00000417664 ZNF462Q96JM2 2506 aa13.48□□□□□ -0.25
SSBP3-205ENST00000417664 ARHGAP32A7KAX9 2087 aa13.48□□□□□ -0.25
SSBP3-205ENST00000417664 MAP1LC3B2A6NCE7 125 aa13.47□□□□□ -0.25
SSBP3-205ENST00000417664 MOSP00540 346 aa13.47□□□□□ -0.25
SSBP3-205ENST00000417664 COMPP49747 757 aaPredicted RBP13.47□□□□□ -0.25
SSBP3-205ENST00000417664 SRSF1Q07955 248 aaKnown RBP eCLIP13.47□□□□□ -0.25
SSBP3-205ENST00000417664 KHDC3LQ587J8 217 aa13.47□□□□□ -0.25
SSBP3-205ENST00000417664 ZNF506Q5JVG8 444 aa13.47□□□□□ -0.25
SSBP3-205ENST00000417664 ZNF114Q8NC26 417 aa13.47□□□□□ -0.25
SSBP3-205ENST00000417664 NPBQ8NG41 125 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms