RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 IGHG2P01859 326 aa11.27□□□□□ -0.61
SF3B1-204ENST00000414963 C1QBP02746 253 aa11.27□□□□□ -0.61
SF3B1-204ENST00000414963 EGR2P11161 476 aaPredicted RBP11.27□□□□□ -0.61
SF3B1-204ENST00000414963 CHRNA7P36544 502 aa11.27□□□□□ -0.61
SF3B1-204ENST00000414963 PAX9P55771 341 aa11.27□□□□□ -0.61
SF3B1-204ENST00000414963 S100A10P60903 97 aa11.27□□□□□ -0.61
SF3B1-204ENST00000414963 RPL15P61313 204 aaKnown RBP11.27□□□□□ -0.61
SF3B1-204ENST00000414963 GNB1P62873 340 aa11.27□□□□□ -0.61
SF3B1-204ENST00000414963 LRRC37A5PQ49AS3 106 aa11.27□□□□□ -0.61
SF3B1-204ENST00000414963 TMEM65Q6PI78 240 aa11.27□□□□□ -0.61
SF3B1-204ENST00000414963 HSD17B13Q7Z5P4 300 aaPredicted RBP11.27□□□□□ -0.61
SF3B1-204ENST00000414963 THAP6Q8TBB0 222 aa11.27□□□□□ -0.61
SF3B1-204ENST00000414963 DTD1Q8TEA8 209 aa11.27□□□□□ -0.61
SF3B1-204ENST00000414963 ARPC1AQ92747 370 aa11.27□□□□□ -0.61
SF3B1-204ENST00000414963 PPP1R14BQ96C90 147 aa11.27□□□□□ -0.61
SF3B1-204ENST00000414963 JMJD8Q96S16 334 aa11.27□□□□□ -0.61
SF3B1-204ENST00000414963 HSPB9Q9BQS6 159 aa11.27□□□□□ -0.61
SF3B1-204ENST00000414963 PLEKHA3Q9HB20 300 aa11.27□□□□□ -0.61
SF3B1-204ENST00000414963 LSM5Q9Y4Y9 91 aaKnown RBP11.27□□□□□ -0.61
SF3B1-204ENST00000414963 WSB1Q9Y6I7 421 aa11.27□□□□□ -0.61
SF3B1-204ENST00000414963 IGLC7A0M8Q6 106 aa11.26□□□□□ -0.61
SF3B1-204ENST00000414963 MSGN1A6NI15 193 aa11.26□□□□□ -0.61
SF3B1-204ENST00000414963 E5RGE8 158 aa11.26□□□□□ -0.61
SF3B1-204ENST00000414963 SMLR1H3BR10 107 aa11.26□□□□□ -0.61
SF3B1-204ENST00000414963 WRBO00258 174 aa11.26□□□□□ -0.61
SF3B1-204ENST00000414963 SSSCA1O60232 199 aa11.26□□□□□ -0.61
SF3B1-204ENST00000414963 OPN1MWP04001 364 aa11.26□□□□□ -0.61
SF3B1-204ENST00000414963 RNASE1P07998 156 aaKnown RBP11.26□□□□□ -0.61
SF3B1-204ENST00000414963 OPN1MW2P0DN77 364 aa11.26□□□□□ -0.61
SF3B1-204ENST00000414963 OPN1MW3P0DN78 364 aa11.26□□□□□ -0.61
SF3B1-204ENST00000414963 PVALBP20472 110 aaPredicted RBP11.26□□□□□ -0.61
SF3B1-204ENST00000414963 CRIP2P52943 208 aaPredicted RBP11.26□□□□□ -0.61
SF3B1-204ENST00000414963 ATP5IP56385 69 aaPredicted RBP11.26□□□□□ -0.61
SF3B1-204ENST00000414963 BLCAPP62952 87 aa11.26□□□□□ -0.61
SF3B1-204ENST00000414963 NDPQ00604 133 aa11.26□□□□□ -0.61
SF3B1-204ENST00000414963 MRPL41Q8IXM3 137 aaKnown RBP11.26□□□□□ -0.61
SF3B1-204ENST00000414963 NPFFR1Q9GZQ6 430 aa11.26□□□□□ -0.61
SF3B1-204ENST00000414963 HIPK2Q9H2X6 1198 aa11.26□□□□□ -0.61
SF3B1-204ENST00000414963 TNFRSF19Q9NS68 423 aa11.26□□□□□ -0.61
SF3B1-204ENST00000414963 OR5AC2Q9NZP5 309 aa11.26□□□□□ -0.61
SF3B1-204ENST00000414963 ZNF580Q9UK33 172 aa11.26□□□□□ -0.61
SF3B1-204ENST00000414963 HMSDA8MTL9 139 aa11.25□□□□□ -0.61
SF3B1-204ENST00000414963 KCNAB3O43448 404 aa11.25□□□□□ -0.61
SF3B1-204ENST00000414963 TSC22D2O75157 780 aa11.25□□□□□ -0.61
SF3B1-204ENST00000414963 IGF1P05019 195 aa11.25□□□□□ -0.61
SF3B1-204ENST00000414963 P2RY1P47900 373 aa11.25□□□□□ -0.61
SF3B1-204ENST00000414963 HOXA1P49639 335 aaPredicted RBP11.25□□□□□ -0.61
SF3B1-204ENST00000414963 WT1-ASQ06250 92 aa11.25□□□□□ -0.61
SF3B1-204ENST00000414963 BSXQ3C1V8 233 aa11.25□□□□□ -0.61
SF3B1-204ENST00000414963 SPINK9Q5DT21 86 aa11.25□□□□□ -0.61
SF3B1-204ENST00000414963 Q8N2B8 174 aa11.25□□□□□ -0.61
SF3B1-204ENST00000414963 OR11H4Q8NGC9 324 aa11.25□□□□□ -0.61
SF3B1-204ENST00000414963 OR10W1Q8NGF6 305 aa11.25□□□□□ -0.61
SF3B1-204ENST00000414963 SGMS2Q8NHU3 365 aa11.25□□□□□ -0.61
SF3B1-204ENST00000414963 TMEM68Q96MH6 324 aa11.25□□□□□ -0.61
SF3B1-204ENST00000414963 HINT2Q9BX68 163 aa11.25□□□□□ -0.61
SF3B1-204ENST00000414963 ENY2Q9NPA8 101 aa11.25□□□□□ -0.61
SF3B1-204ENST00000414963 MBD2Q9UBB5 411 aa11.25□□□□□ -0.61
SF3B1-204ENST00000414963 U3KQ87 197 aa11.25□□□□□ -0.61
SF3B1-204ENST00000414963 L7N2F9 121 aa11.24□□□□□ -0.61
SF3B1-204ENST00000414963 RPL23AP62750 156 aaKnown RBP11.24□□□□□ -0.61
SF3B1-204ENST00000414963 UBA52P62987 128 aaKnown RBP11.24□□□□□ -0.61
SF3B1-204ENST00000414963 VAMP2P63027 116 aa11.24□□□□□ -0.61
SF3B1-204ENST00000414963 ERHP84090 104 aaKnown RBP11.24□□□□□ -0.61
SF3B1-204ENST00000414963 AKIRIN2Q53H80 203 aa11.24□□□□□ -0.61
SF3B1-204ENST00000414963 OR2C3Q8N628 320 aa11.24□□□□□ -0.61
SF3B1-204ENST00000414963 GRPEL2Q8TAA5 225 aa11.24□□□□□ -0.61
SF3B1-204ENST00000414963 HYLS1Q96M11 299 aa11.24□□□□□ -0.61
SF3B1-204ENST00000414963 PRSS22Q9GZN4 317 aa11.24□□□□□ -0.61
SF3B1-204ENST00000414963 HEYLQ9NQ87 328 aaPredicted RBP11.24□□□□□ -0.61
SF3B1-204ENST00000414963 LYRM2Q9NU23 88 aaPredicted RBP11.24□□□□□ -0.61
SF3B1-204ENST00000414963 FBXO7Q9Y3I1 522 aa11.24□□□□□ -0.61
SF3B1-204ENST00000414963 SH2D7A6NKC9 451 aaPredicted RBP11.23□□□□□ -0.61
SF3B1-204ENST00000414963 LINC01548A6NM66 108 aa11.23□□□□□ -0.61
SF3B1-204ENST00000414963 NPIPB5A8MRT5 1133 aa11.23□□□□□ -0.61
SF3B1-204ENST00000414963 TRIM77I1YAP6 450 aa11.23□□□□□ -0.61
SF3B1-204ENST00000414963 ATP6V0E1O15342 81 aa11.23□□□□□ -0.61
SF3B1-204ENST00000414963 CRYGCP07315 174 aa11.23□□□□□ -0.61
SF3B1-204ENST00000414963 OR13C7P0DN81 318 aa11.23□□□□□ -0.61
SF3B1-204ENST00000414963 IAPPP10997 89 aa11.23□□□□□ -0.61
SF3B1-204ENST00000414963 HTR2BP41595 481 aa11.23□□□□□ -0.61
SF3B1-204ENST00000414963 RPP30P78346 268 aaKnown RBP11.23□□□□□ -0.61
SF3B1-204ENST00000414963 ZFP69Q49AA0 526 aa11.23□□□□□ -0.61
SF3B1-204ENST00000414963 C19orf54Q5BKX5 351 aa11.23□□□□□ -0.61
SF3B1-204ENST00000414963 ASPHD1Q5U4P2 390 aa11.23□□□□□ -0.61
SF3B1-204ENST00000414963 PVRIGQ6DKI7 326 aa11.23□□□□□ -0.61
SF3B1-204ENST00000414963 Q6ZS46 218 aa11.23□□□□□ -0.61
SF3B1-204ENST00000414963 SLC35E3Q7Z769 313 aa11.23□□□□□ -0.61
SF3B1-204ENST00000414963 ZNF546Q86UE3 836 aa11.23□□□□□ -0.61
SF3B1-204ENST00000414963 NOXA1Q86UR1 476 aa11.23□□□□□ -0.61
SF3B1-204ENST00000414963 TTC9CQ8N5M4 171 aa11.23□□□□□ -0.61
SF3B1-204ENST00000414963 ZNF114Q8NC26 417 aa11.23□□□□□ -0.61
SF3B1-204ENST00000414963 DUX5Q96PT3 197 aa11.23□□□□□ -0.61
SF3B1-204ENST00000414963 PSENENQ9NZ42 101 aa11.23□□□□□ -0.61
SF3B1-204ENST00000414963 TNFSF18Q9UNG2 199 aa11.23□□□□□ -0.61
SF3B1-204ENST00000414963 FAM181BA6NEQ2 426 aa11.22□□□□□ -0.61
SF3B1-204ENST00000414963 AP4M1O00189 453 aa11.22□□□□□ -0.61
SF3B1-204ENST00000414963 PLXNB1O43157 2135 aa11.22□□□□□ -0.61
SF3B1-204ENST00000414963 TCF21O43680 179 aa11.22□□□□□ -0.61
SF3B1-204ENST00000414963 AREGP15514 252 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms