RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 ATP5SQ99766 215 aa9.33□□□□□ -0.92
SNRNP35-202ENST00000412157 ZNF430Q9H8G1 570 aaPredicted RBP9.33□□□□□ -0.92
SNRNP35-202ENST00000412157 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.32□□□□□ -0.92
SNRNP35-202ENST00000412157 RRHO14718 337 aa9.32□□□□□ -0.92
SNRNP35-202ENST00000412157 IFNA5P01569 189 aa9.32□□□□□ -0.92
SNRNP35-202ENST00000412157 OPN1MWP04001 364 aa9.32□□□□□ -0.92
SNRNP35-202ENST00000412157 OPN1MW2P0DN77 364 aa9.32□□□□□ -0.92
SNRNP35-202ENST00000412157 OPN1MW3P0DN78 364 aa9.32□□□□□ -0.92
SNRNP35-202ENST00000412157 IGHV4-31P0DP07 118 aa9.32□□□□□ -0.92
SNRNP35-202ENST00000412157 MYOD1P15172 320 aa9.32□□□□□ -0.92
SNRNP35-202ENST00000412157 TMEM11P17152 192 aa9.32□□□□□ -0.92
SNRNP35-202ENST00000412157 NPY1RP25929 384 aa9.32□□□□□ -0.92
SNRNP35-202ENST00000412157 CNTFRP26992 372 aa9.32□□□□□ -0.92
SNRNP35-202ENST00000412157 HTR2BP41595 481 aa9.32□□□□□ -0.92
SNRNP35-202ENST00000412157 ERHP84090 104 aaKnown RBP9.32□□□□□ -0.92
SNRNP35-202ENST00000412157 SLC38A11Q08AI6 406 aa9.32□□□□□ -0.92
SNRNP35-202ENST00000412157 TNXAQ16473 311 aa9.32□□□□□ -0.92
SNRNP35-202ENST00000412157 NDUFA5Q16718 116 aa9.32□□□□□ -0.92
SNRNP35-202ENST00000412157 ATP6V1FQ16864 119 aa9.32□□□□□ -0.92
SNRNP35-202ENST00000412157 RUSC1-AS1Q66K80 236 aa9.32□□□□□ -0.92
SNRNP35-202ENST00000412157 DYNAPQ8N1N2 210 aa9.32□□□□□ -0.92
SNRNP35-202ENST00000412157 SLC24A4Q8NFF2 622 aa9.32□□□□□ -0.92
SNRNP35-202ENST00000412157 PINX1Q96BK5 328 aaKnown RBP9.32□□□□□ -0.92
SNRNP35-202ENST00000412157 EAF1Q96JC9 268 aaPredicted RBP9.32□□□□□ -0.92
SNRNP35-202ENST00000412157 FBXL15Q9H469 300 aa9.32□□□□□ -0.92
SNRNP35-202ENST00000412157 TPSG1Q9NRR2 321 aa9.32□□□□□ -0.92
SNRNP35-202ENST00000412157 SIGLEC9Q9Y336 463 aa9.32□□□□□ -0.92
SNRNP35-202ENST00000412157 TNCP24821 2201 aa9.31□□□□□ -0.92
SNRNP35-202ENST00000412157 IGHV3OR16-10A0A075B7F0 116 aa9.31□□□□□ -0.92
SNRNP35-202ENST00000412157 C15orf62A8K5M9 175 aa9.31□□□□□ -0.92
SNRNP35-202ENST00000412157 TGFAP01135 160 aa9.31□□□□□ -0.92
SNRNP35-202ENST00000412157 CRYGBP07316 175 aa9.31□□□□□ -0.92
SNRNP35-202ENST00000412157 FAM106CPP0CH98 169 aa9.31□□□□□ -0.92
SNRNP35-202ENST00000412157 RPL27AP46776 148 aaKnown RBP9.31□□□□□ -0.92
SNRNP35-202ENST00000412157 ATP5IP56385 69 aaPredicted RBP9.31□□□□□ -0.92
SNRNP35-202ENST00000412157 EBI3Q14213 229 aa9.31□□□□□ -0.92
SNRNP35-202ENST00000412157 HNF4GQ14541 408 aa9.31□□□□□ -0.92
SNRNP35-202ENST00000412157 PRSS8Q16651 343 aa9.31□□□□□ -0.92
SNRNP35-202ENST00000412157 TMEM249Q2WGJ8 235 aa9.31□□□□□ -0.92
SNRNP35-202ENST00000412157 PPP1R27Q86WC6 154 aa9.31□□□□□ -0.92
SNRNP35-202ENST00000412157 THNSL2Q86YJ6 484 aa9.31□□□□□ -0.92
SNRNP35-202ENST00000412157 KRTAP1-3Q8IUG1 177 aa9.31□□□□□ -0.92
SNRNP35-202ENST00000412157 MAPK1IP1LQ8NDC0 245 aa9.31□□□□□ -0.92
SNRNP35-202ENST00000412157 SCGB1C1Q8TD33 95 aa9.31□□□□□ -0.92
SNRNP35-202ENST00000412157 C17orf50Q8WW18 174 aa9.31□□□□□ -0.92
SNRNP35-202ENST00000412157 RITA1Q96K30 269 aa9.31□□□□□ -0.92
SNRNP35-202ENST00000412157 TMEM147Q9BVK8 224 aa9.31□□□□□ -0.92
SNRNP35-202ENST00000412157 WFDC1Q9HC57 220 aa9.31□□□□□ -0.92
SNRNP35-202ENST00000412157 C1RLQ9NZP8 487 aa9.31□□□□□ -0.92
SNRNP35-202ENST00000412157 NAV3Q8IVL0 2385 aa9.31□□□□□ -0.92
SNRNP35-202ENST00000412157 NDUFA3O95167 84 aa9.3□□□□□ -0.92
SNRNP35-202ENST00000412157 IFNA4P05014 189 aa9.3□□□□□ -0.92
SNRNP35-202ENST00000412157 CD24P25063 80 aa9.3□□□□□ -0.92
SNRNP35-202ENST00000412157 PAX6P26367 422 aa9.3□□□□□ -0.92
SNRNP35-202ENST00000412157 SNCAP37840 140 aa9.3□□□□□ -0.92
SNRNP35-202ENST00000412157 GNB1P62873 340 aa9.3□□□□□ -0.92
SNRNP35-202ENST00000412157 CLLU1Q5K131 121 aa9.3□□□□□ -0.92
SNRNP35-202ENST00000412157 C10orf55Q5SWW7 151 aa9.3□□□□□ -0.92
SNRNP35-202ENST00000412157 ETV3LQ6ZN32 361 aa9.3□□□□□ -0.92
SNRNP35-202ENST00000412157 HAPLN4Q86UW8 402 aa9.3□□□□□ -0.92
SNRNP35-202ENST00000412157 HSD17B11Q8NBQ5 300 aa9.3□□□□□ -0.92
SNRNP35-202ENST00000412157 NPBQ8NG41 125 aa9.3□□□□□ -0.92
SNRNP35-202ENST00000412157 TMED6Q8WW62 240 aa9.3□□□□□ -0.92
SNRNP35-202ENST00000412157 GINS3Q9BRX5 216 aa9.3□□□□□ -0.92
SNRNP35-202ENST00000412157 TMUB1Q9BVT8 246 aa9.3□□□□□ -0.92
SNRNP35-202ENST00000412157 NDUFA4L2Q9NRX3 87 aa9.3□□□□□ -0.92
SNRNP35-202ENST00000412157 FAM96BQ9Y3D0 163 aa9.3□□□□□ -0.92
SNRNP35-202ENST00000412157 PRRC2AP48634 2157 aaKnown RBP9.29□□□□□ -0.92
SNRNP35-202ENST00000412157 UBE2L5PA0A1B0GUS4 154 aa9.29□□□□□ -0.92
SNRNP35-202ENST00000412157 PMS2P5A8MQ11 134 aa9.29□□□□□ -0.92
SNRNP35-202ENST00000412157 INS-IGF2F8WCM5 200 aa9.29□□□□□ -0.92
SNRNP35-202ENST00000412157 FBXO24O75426 580 aa9.29□□□□□ -0.92
SNRNP35-202ENST00000412157 CA2P00918 260 aa9.29□□□□□ -0.92
SNRNP35-202ENST00000412157 SEC11BP0C7V7 166 aa9.29□□□□□ -0.92
SNRNP35-202ENST00000412157 IGHV4-38-2P0DP08 117 aa9.29□□□□□ -0.92
SNRNP35-202ENST00000412157 COMPP49747 757 aaPredicted RBP9.29□□□□□ -0.92
SNRNP35-202ENST00000412157 SUB1P53999 127 aaKnown RBP eCLIP9.29□□□□□ -0.92
SNRNP35-202ENST00000412157 ARL16Q0P5N6 197 aa9.29□□□□□ -0.92
SNRNP35-202ENST00000412157 PJVKQ0ZLH3 352 aa9.29□□□□□ -0.92
SNRNP35-202ENST00000412157 CYB5R2Q6BCY4 276 aa9.29□□□□□ -0.92
SNRNP35-202ENST00000412157 BRD3OSQ6XYD6 125 aa9.29□□□□□ -0.92
SNRNP35-202ENST00000412157 Q8N6K4 173 aa9.29□□□□□ -0.92
SNRNP35-202ENST00000412157 LRRC20Q8TCA0 184 aa9.29□□□□□ -0.92
SNRNP35-202ENST00000412157 GNPNAT1Q96EK6 184 aaPredicted RBP9.29□□□□□ -0.92
SNRNP35-202ENST00000412157 FOXC2Q99958 501 aa9.29□□□□□ -0.92
SNRNP35-202ENST00000412157 ARV1Q9H2C2 271 aa9.29□□□□□ -0.92
SNRNP35-202ENST00000412157 SLC25A32Q9H2D1 315 aa9.29□□□□□ -0.92
SNRNP35-202ENST00000412157 UQCC1Q9NVA1 299 aa9.29□□□□□ -0.92
SNRNP35-202ENST00000412157 NIPBLQ6KC79 2804 aaeCLIP9.29□□□□□ -0.92
SNRNP35-202ENST00000412157 A0A0U1RQK1 487 aa9.28□□□□□ -0.92
SNRNP35-202ENST00000412157 NCBP2LA6PVI3 153 aaKnown RBP9.28□□□□□ -0.92
SNRNP35-202ENST00000412157 CNIH1O95406 144 aa9.28□□□□□ -0.92
SNRNP35-202ENST00000412157 FBP1P09467 338 aa9.28□□□□□ -0.92
SNRNP35-202ENST00000412157 BPIFB3P59826 476 aa9.28□□□□□ -0.92
SNRNP35-202ENST00000412157 DLK1P80370 383 aa9.28□□□□□ -0.92
SNRNP35-202ENST00000412157 C5orf64Q2M2E5 130 aa9.28□□□□□ -0.92
SNRNP35-202ENST00000412157 C2orf83Q53S99 150 aa9.28□□□□□ -0.92
SNRNP35-202ENST00000412157 FAM74A1Q5RGS3 127 aa9.28□□□□□ -0.92
SNRNP35-202ENST00000412157 HSD17B13Q7Z5P4 300 aaPredicted RBP9.28□□□□□ -0.92
SNRNP35-202ENST00000412157 OR10W1Q8NGF6 305 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms