RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 LIPKQ5VXJ0 399 aa13□□□□□ -0.33
UFD1-202ENST00000399523 MFSD4AQ8N468 514 aa13□□□□□ -0.33
UFD1-202ENST00000399523 GDPD1Q8N9F7 314 aa13□□□□□ -0.33
UFD1-202ENST00000399523 C21orf62Q9NYP8 219 aa13□□□□□ -0.33
UFD1-202ENST00000399523 PSORS1C1Q9UIG5 152 aa13□□□□□ -0.33
UFD1-202ENST00000399523 RAB22AQ9UL26 194 aa13□□□□□ -0.33
UFD1-202ENST00000399523 SPATA2Q9UM82 520 aa13□□□□□ -0.33
UFD1-202ENST00000399523 AK6Q9Y3D8 172 aaKnown RBP13□□□□□ -0.33
UFD1-202ENST00000399523 X6R8D5 127 aa13□□□□□ -0.33
UFD1-202ENST00000399523 IGKV3-7A0A075B6H7 116 aa12.99□□□□□ -0.33
UFD1-202ENST00000399523 TMEM272A0A1B0GTI8 110 aa12.99□□□□□ -0.33
UFD1-202ENST00000399523 ERICH4A6NGS2 130 aa12.99□□□□□ -0.33
UFD1-202ENST00000399523 C16orf90A8MZG2 172 aa12.99□□□□□ -0.33
UFD1-202ENST00000399523 DFFBO76075 338 aa12.99□□□□□ -0.33
UFD1-202ENST00000399523 Q6ZRM9 215 aa12.99□□□□□ -0.33
UFD1-202ENST00000399523 GBGT1Q8N5D6 347 aa12.99□□□□□ -0.33
UFD1-202ENST00000399523 OR10R2Q8NGX6 335 aa12.99□□□□□ -0.33
UFD1-202ENST00000399523 SCARB1Q8WTV0 552 aa12.99□□□□□ -0.33
UFD1-202ENST00000399523 OR10C1Q96KK4 312 aa12.99□□□□□ -0.33
UFD1-202ENST00000399523 CMTM3Q96MX0 182 aa12.99□□□□□ -0.33
UFD1-202ENST00000399523 AIFM2Q9BRQ8 373 aa12.99□□□□□ -0.33
UFD1-202ENST00000399523 HRASLSQ9HDD0 168 aa12.99□□□□□ -0.33
UFD1-202ENST00000399523 IGLV2-18A0A075B6J9 118 aa12.98□□□□□ -0.33
UFD1-202ENST00000399523 IFNA10P01566 189 aa12.98□□□□□ -0.33
UFD1-202ENST00000399523 HIST1H1DP16402 221 aaKnown RBP12.98□□□□□ -0.33
UFD1-202ENST00000399523 NFYAP23511 347 aaPredicted RBP12.98□□□□□ -0.33
UFD1-202ENST00000399523 PAFAH1B2P68402 229 aa12.98□□□□□ -0.33
UFD1-202ENST00000399523 LEMD1Q68G75 181 aa12.98□□□□□ -0.33
UFD1-202ENST00000399523 ZNF66Q6ZN08 573 aa12.98□□□□□ -0.33
UFD1-202ENST00000399523 OR10W1Q8NGF6 305 aa12.98□□□□□ -0.33
UFD1-202ENST00000399523 SCRT1Q9BWW7 348 aa12.98□□□□□ -0.33
UFD1-202ENST00000399523 COMMD5Q9GZQ3 224 aa12.98□□□□□ -0.33
UFD1-202ENST00000399523 TAS2R8Q9NYW2 309 aa12.98□□□□□ -0.33
UFD1-202ENST00000399523 CELA1Q9UNI1 258 aa12.98□□□□□ -0.33
UFD1-202ENST00000399523 IGHV3-49A0A0A0MS15 119 aa12.97□□□□□ -0.33
UFD1-202ENST00000399523 TRAV3A0A0B4J244 114 aa12.97□□□□□ -0.33
UFD1-202ENST00000399523 SERPINE2P07093 398 aa12.97□□□□□ -0.33
UFD1-202ENST00000399523 CTSGP08311 255 aa12.97□□□□□ -0.33
UFD1-202ENST00000399523 FGF2P09038 288 aa12.97□□□□□ -0.33
UFD1-202ENST00000399523 CTXN2P0C2S0 81 aa12.97□□□□□ -0.33
UFD1-202ENST00000399523 GADD45AP24522 165 aa12.97□□□□□ -0.33
UFD1-202ENST00000399523 TALDO1P37837 337 aa12.97□□□□□ -0.33
UFD1-202ENST00000399523 RANBP1P43487 201 aa12.97□□□□□ -0.33
UFD1-202ENST00000399523 DEFB131AP59861 70 aa12.97□□□□□ -0.33
UFD1-202ENST00000399523 C1orf134Q5TEV5 83 aa12.97□□□□□ -0.33
UFD1-202ENST00000399523 LAIR2Q6ISS4 152 aa12.97□□□□□ -0.33
UFD1-202ENST00000399523 SLC25A24Q6NUK1 477 aa12.97□□□□□ -0.33
UFD1-202ENST00000399523 AHSA2Q719I0 299 aa12.97□□□□□ -0.33
UFD1-202ENST00000399523 DGCR14Q96DF8 476 aaKnown RBP12.97□□□□□ -0.33
UFD1-202ENST00000399523 QTRT1Q9BXR0 403 aaKnown RBP12.97□□□□□ -0.33
UFD1-202ENST00000399523 DNAH5Q8TE73 4624 aa12.96□□□□□ -0.33
UFD1-202ENST00000399523 A0A075B6Q4 140 aa12.96□□□□□ -0.33
UFD1-202ENST00000399523 IGHV3-21A0A0B4J1V1 117 aa12.96□□□□□ -0.33
UFD1-202ENST00000399523 UPK2O00526 184 aa12.96□□□□□ -0.33
UFD1-202ENST00000399523 CD5P06127 495 aa12.96□□□□□ -0.33
UFD1-202ENST00000399523 OR13C7P0DN81 318 aa12.96□□□□□ -0.33
UFD1-202ENST00000399523 WT1-ASQ06250 92 aa12.96□□□□□ -0.33
UFD1-202ENST00000399523 POU2AF1Q16633 256 aa12.96□□□□□ -0.33
UFD1-202ENST00000399523 THOC7Q6I9Y2 204 aaKnown RBP12.96□□□□□ -0.33
UFD1-202ENST00000399523 ZNF767PQ75MW2 155 aa12.96□□□□□ -0.33
UFD1-202ENST00000399523 STHQ8IWL8 128 aa12.96□□□□□ -0.33
UFD1-202ENST00000399523 GIMAP1Q8WWP7 306 aa12.96□□□□□ -0.33
UFD1-202ENST00000399523 PLCXD1Q9NUJ7 323 aa12.96□□□□□ -0.33
UFD1-202ENST00000399523 TRAV14DV4A0A0A6YYC5 116 aa12.95□□□□□ -0.34
UFD1-202ENST00000399523 K7EIM0 57 aa12.95□□□□□ -0.34
UFD1-202ENST00000399523 IFNA21P01568 189 aa12.95□□□□□ -0.34
UFD1-202ENST00000399523 IFNA17P01571 189 aa12.95□□□□□ -0.34
UFD1-202ENST00000399523 DTYMKP23919 212 aa12.95□□□□□ -0.34
UFD1-202ENST00000399523 RELQ04864 619 aaPredicted RBP12.95□□□□□ -0.34
UFD1-202ENST00000399523 MORN3Q6PF18 240 aaPredicted RBP12.95□□□□□ -0.34
UFD1-202ENST00000399523 TMEM91Q6ZNR0 172 aa12.95□□□□□ -0.34
UFD1-202ENST00000399523 TCF24Q7RTU0 167 aa12.95□□□□□ -0.34
UFD1-202ENST00000399523 HSD17B13Q7Z5P4 300 aaPredicted RBP12.95□□□□□ -0.34
UFD1-202ENST00000399523 TRPT1Q86TN4 253 aaKnown RBP12.95□□□□□ -0.34
UFD1-202ENST00000399523 GPHA2Q96T91 129 aa12.95□□□□□ -0.34
UFD1-202ENST00000399523 NACAE9PAV3 2078 aa12.95□□□□□ -0.34
UFD1-202ENST00000399523 TRAV2A0A0B4J234 112 aa12.94□□□□□ -0.34
UFD1-202ENST00000399523 RBFOX2O43251 390 aaKnown RBP eCLIP12.94□□□□□ -0.343e-7■□□□□ 8.1
UFD1-202ENST00000399523 SPP1P10451 314 aa12.94□□□□□ -0.34
UFD1-202ENST00000399523 TAS2R31P59538 309 aa12.94□□□□□ -0.34
UFD1-202ENST00000399523 Q56UQ5 140 aa12.94□□□□□ -0.34
UFD1-202ENST00000399523 PQLC1Q8N2U9 271 aa12.94□□□□□ -0.34
UFD1-202ENST00000399523 UBAC2Q8NBM4 344 aa12.94□□□□□ -0.34
UFD1-202ENST00000399523 CSNK1G2-AS1Q8NCQ2 148 aa12.94□□□□□ -0.34
UFD1-202ENST00000399523 CYGBQ8WWM9 190 aa12.94□□□□□ -0.34
UFD1-202ENST00000399523 TMEM203Q969S6 136 aa12.94□□□□□ -0.34
UFD1-202ENST00000399523 MND1Q9BWT6 205 aa12.94□□□□□ -0.34
UFD1-202ENST00000399523 MS4A6AQ9H2W1 248 aa12.94□□□□□ -0.34
UFD1-202ENST00000399523 SCRT2Q9NQ03 307 aa12.94□□□□□ -0.34
UFD1-202ENST00000399523 FKBP14Q9NWM8 211 aa12.94□□□□□ -0.34
UFD1-202ENST00000399523 TBC1D24Q9ULP9 559 aa12.94□□□□□ -0.34
UFD1-202ENST00000399523 F11RQ9Y624 299 aaKnown RBP12.94□□□□□ -0.34
UFD1-202ENST00000399523 V9GY05 133 aa12.94□□□□□ -0.34
UFD1-202ENST00000399523 IGHV3OR16-13A0A075B7E8 117 aa12.93□□□□□ -0.34
UFD1-202ENST00000399523 IGHV3-74A0A0B4J1X5 117 aa12.93□□□□□ -0.34
UFD1-202ENST00000399523 NUPL2O15504 423 aaKnown RBP12.93□□□□□ -0.34
UFD1-202ENST00000399523 TRAPPC2P0DI81 140 aa12.93□□□□□ -0.34
UFD1-202ENST00000399523 TRAPPC2BP0DI82 140 aa12.93□□□□□ -0.34
UFD1-202ENST00000399523 C4BPBP20851 252 aa12.93□□□□□ -0.34
UFD1-202ENST00000399523 SPHARQ15513 63 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms