RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 IFNA1P01562 189 aa16.26■□□□□ 0.19
PTPN11-202ENST00000392597 LIPFP07098 398 aa16.26■□□□□ 0.19
PTPN11-202ENST00000392597 HINT2Q9BX68 163 aa16.26■□□□□ 0.19
PTPN11-202ENST00000392597 NPVFQ9HCQ7 196 aa16.26■□□□□ 0.19
PTPN11-202ENST00000392597 SPTAN1Q13813 2472 aaKnown RBP16.25■□□□□ 0.19
PTPN11-202ENST00000392597 SMCO3A2RU48 225 aa16.25■□□□□ 0.19
PTPN11-202ENST00000392597 MYOD1P15172 320 aa16.25■□□□□ 0.19
PTPN11-202ENST00000392597 OPRK1P41145 380 aa16.25■□□□□ 0.19
PTPN11-202ENST00000392597 LGALS7P47929 136 aa16.25■□□□□ 0.19
PTPN11-202ENST00000392597 BSXQ3C1V8 233 aa16.25■□□□□ 0.19
PTPN11-202ENST00000392597 TMEM88Q6PEY1 159 aa16.25■□□□□ 0.19
PTPN11-202ENST00000392597 OR1L8Q8NGR8 309 aa16.25■□□□□ 0.19
PTPN11-202ENST00000392597 RXFP4Q8TDU9 374 aa16.25■□□□□ 0.19
PTPN11-202ENST00000392597 COMMD5Q9GZQ3 224 aa16.25■□□□□ 0.19
PTPN11-202ENST00000392597 NDUFA4L2Q9NRX3 87 aa16.25■□□□□ 0.19
PTPN11-202ENST00000392597 AMMECR1Q9Y4X0 333 aaPredicted RBP16.25■□□□□ 0.19
PTPN11-202ENST00000392597 LSM4Q9Y4Z0 139 aaKnown RBP16.25■□□□□ 0.19
PTPN11-202ENST00000392597 KLF2Q9Y5W3 355 aaPredicted RBP16.25■□□□□ 0.19
PTPN11-202ENST00000392597 CYB5BO43169 146 aa16.25■□□□□ 0.19
PTPN11-202ENST00000392597 LY6HO94772 140 aa16.25■□□□□ 0.19
PTPN11-202ENST00000392597 FGF8P55075 233 aaPredicted RBP16.25■□□□□ 0.19
PTPN11-202ENST00000392597 HNF4GQ14541 408 aa16.25■□□□□ 0.19
PTPN11-202ENST00000392597 C2orf83Q53S99 150 aa16.25■□□□□ 0.19
PTPN11-202ENST00000392597 CBLN2Q8IUK8 224 aa16.25■□□□□ 0.19
PTPN11-202ENST00000392597 P2RX4Q99571 388 aa16.25■□□□□ 0.19
PTPN11-202ENST00000392597 PATZ1Q9HBE1 687 aaKnown RBP16.25■□□□□ 0.19
PTPN11-202ENST00000392597 A0A1W2PPR1 153 aa16.24■□□□□ 0.19
PTPN11-202ENST00000392597 SEC14L6B5MCN3 397 aa16.24■□□□□ 0.19
PTPN11-202ENST00000392597 IGLV2-23P01705 113 aa16.24■□□□□ 0.19
PTPN11-202ENST00000392597 TAGLN2P37802 199 aaKnown RBP16.24■□□□□ 0.19
PTPN11-202ENST00000392597 RHEBQ15382 184 aa16.24■□□□□ 0.19
PTPN11-202ENST00000392597 VMA21Q3ZAQ7 101 aa16.24■□□□□ 0.19
PTPN11-202ENST00000392597 RBMS3Q6XE24 437 aaKnown RBP16.24■□□□□ 0.19
PTPN11-202ENST00000392597 FASNP49327 2511 aaKnown RBP16.23■□□□□ 0.19
PTPN11-202ENST00000392597 BUB1B-PAK6H3BSN5 160 aa16.23■□□□□ 0.19
PTPN11-202ENST00000392597 AWAT1Q58HT5 328 aa16.23■□□□□ 0.19
PTPN11-202ENST00000392597 ARSJQ5FYB0 599 aaPredicted RBP16.23■□□□□ 0.19
PTPN11-202ENST00000392597 SLC25A22Q9H936 323 aa16.23■□□□□ 0.19
PTPN11-202ENST00000392597 SMCO4Q9NRQ5 59 aa16.23■□□□□ 0.19
PTPN11-202ENST00000392597 VAX2Q9UIW0 290 aa16.23■□□□□ 0.19
PTPN11-202ENST00000392597 A0A1W2PN81 502 aa16.22■□□□□ 0.19
PTPN11-202ENST00000392597 ZFP92A6NM28 416 aa16.22■□□□□ 0.19
PTPN11-202ENST00000392597 NDUFS6O75380 124 aaKnown RBP16.22■□□□□ 0.19
PTPN11-202ENST00000392597 IGFBP2P18065 325 aa16.22■□□□□ 0.19
PTPN11-202ENST00000392597 CHRNA7P36544 502 aa16.22■□□□□ 0.19
PTPN11-202ENST00000392597 TMEM249Q2WGJ8 235 aa16.22■□□□□ 0.19
PTPN11-202ENST00000392597 CYB561D1Q8N8Q1 229 aa16.22■□□□□ 0.19
PTPN11-202ENST00000392597 MGST2Q99735 147 aa16.22■□□□□ 0.19
PTPN11-202ENST00000392597 GGTLC1Q9BX51 225 aa16.22■□□□□ 0.19
PTPN11-202ENST00000392597 TENM4Q6N022 2769 aa16.22■□□□□ 0.19
PTPN11-202ENST00000392597 C22orf46C9J442 243 aa16.22■□□□□ 0.19
PTPN11-202ENST00000392597 M0R036 132 aa16.22■□□□□ 0.19
PTPN11-202ENST00000392597 RAB31Q13636 194 aa16.22■□□□□ 0.19
PTPN11-202ENST00000392597 TEPPQ6URK8 271 aa16.22■□□□□ 0.19
PTPN11-202ENST00000392597 C17orf50Q8WW18 174 aa16.22■□□□□ 0.19
PTPN11-202ENST00000392597 RAB24Q969Q5 203 aa16.22■□□□□ 0.19
PTPN11-202ENST00000392597 C7orf77A4D0Y5 90 aa16.21■□□□□ 0.19
PTPN11-202ENST00000392597 A6NNC1 897 aa16.21■□□□□ 0.19
PTPN11-202ENST00000392597 M0R1W7 72 aa16.21■□□□□ 0.19
PTPN11-202ENST00000392597 PAX6P26367 422 aa16.21■□□□□ 0.19
PTPN11-202ENST00000392597 FAM122CQ6P4D5 195 aa16.21■□□□□ 0.19
PTPN11-202ENST00000392597 TEX45Q8NA69 505 aa16.21■□□□□ 0.19
PTPN11-202ENST00000392597 SSBP3Q9BWW4 388 aaPredicted RBP16.21■□□□□ 0.19
PTPN11-202ENST00000392597 ONECUT1Q9UBC0 465 aa16.21■□□□□ 0.19
PTPN11-202ENST00000392597 OPN1MWP04001 364 aa16.2■□□□□ 0.18
PTPN11-202ENST00000392597 OPN1MW2P0DN77 364 aa16.2■□□□□ 0.18
PTPN11-202ENST00000392597 OPN1MW3P0DN78 364 aa16.2■□□□□ 0.18
PTPN11-202ENST00000392597 RNASE2P10153 161 aaKnown RBP16.2■□□□□ 0.18
PTPN11-202ENST00000392597 ATF4P18848 351 aaPredicted RBP16.2■□□□□ 0.18
PTPN11-202ENST00000392597 CDC34P49427 236 aaPredicted RBP16.2■□□□□ 0.18
PTPN11-202ENST00000392597 ERHP84090 104 aaKnown RBP16.2■□□□□ 0.18
PTPN11-202ENST00000392597 OR4P4Q8NGL7 312 aa16.2■□□□□ 0.18
PTPN11-202ENST00000392597 C1orf159Q96HA4 380 aa16.2■□□□□ 0.18
PTPN11-202ENST00000392597 RPS10P5Q9NQ39 176 aa16.2■□□□□ 0.18
PTPN11-202ENST00000392597 MANBALQ9NQG1 85 aa16.2■□□□□ 0.18
PTPN11-202ENST00000392597 DCHS2Q6V1P9 2916 aa16.2■□□□□ 0.18
PTPN11-202ENST00000392597 TUBA4BQ9H853 241 aa16.2■□□□□ 0.18
PTPN11-202ENST00000392597 ZNF430Q9H8G1 570 aaPredicted RBP16.2■□□□□ 0.18
PTPN11-202ENST00000392597 INSIG2Q9Y5U4 225 aa16.2■□□□□ 0.18
PTPN11-202ENST00000392597 PXMP4Q9Y6I8 212 aa16.2■□□□□ 0.18
PTPN11-202ENST00000392597 LOC105371242A0A075B767 164 aa16.19■□□□□ 0.18
PTPN11-202ENST00000392597 IGHV1-3A0A0C4DH29 117 aa16.19■□□□□ 0.18
PTPN11-202ENST00000392597 LY6LH3BQJ8 138 aa16.19■□□□□ 0.18
PTPN11-202ENST00000392597 C19orf84I3L1E1 186 aa16.19■□□□□ 0.18
PTPN11-202ENST00000392597 SNRNP70P08621 437 aaKnown RBP16.19■□□□□ 0.18
PTPN11-202ENST00000392597 UBTD1Q9HAC8 227 aa16.19■□□□□ 0.18
PTPN11-202ENST00000392597 LOC105371267A0A1B0GV96 52 aa16.18■□□□□ 0.18
PTPN11-202ENST00000392597 H3BQ15 152 aa16.18■□□□□ 0.18
PTPN11-202ENST00000392597 SLC25A17O43808 307 aa16.18■□□□□ 0.18
PTPN11-202ENST00000392597 YIF1AO95070 293 aa16.18■□□□□ 0.18
PTPN11-202ENST00000392597 FBP1P09467 338 aa16.18■□□□□ 0.18
PTPN11-202ENST00000392597 GPR6P46095 362 aaPredicted RBP16.18■□□□□ 0.18
PTPN11-202ENST00000392597 RPL29P47914 159 aaKnown RBP16.18■□□□□ 0.18
PTPN11-202ENST00000392597 TMEM144Q7Z5S9 345 aa16.18■□□□□ 0.18
PTPN11-202ENST00000392597 OR11H6Q8NGC7 330 aa16.18■□□□□ 0.18
PTPN11-202ENST00000392597 RPEQ96AT9 228 aa16.18■□□□□ 0.18
PTPN11-202ENST00000392597 PUS1Q9Y606 427 aaKnown RBP eCLIP16.18■□□□□ 0.18
PTPN11-202ENST00000392597 ENSAO43768 121 aaKnown RBP16.18■□□□□ 0.18
PTPN11-202ENST00000392597 COX7A1P24310 79 aa16.18■□□□□ 0.18
PTPN11-202ENST00000392597 PSMB3P49720 205 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms