RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 MMD2Q8IY49 270 aa16.45■□□□□ 0.22
TRIM4-202ENST00000354241 NDUFA4L2Q9NRX3 87 aa16.45■□□□□ 0.22
TRIM4-202ENST00000354241 CR1P17927 2039 aa16.45■□□□□ 0.22
TRIM4-202ENST00000354241 GATA3P23771 443 aa16.45■□□□□ 0.22
TRIM4-202ENST00000354241 TNXAQ16473 311 aa16.45■□□□□ 0.22
TRIM4-202ENST00000354241 FBLN7Q53RD9 439 aa16.45■□□□□ 0.22
TRIM4-202ENST00000354241 PRSS57Q6UWY2 283 aa16.45■□□□□ 0.22
TRIM4-202ENST00000354241 SLC24A4Q8NFF2 622 aa16.45■□□□□ 0.22
TRIM4-202ENST00000354241 OR10W1Q8NGF6 305 aa16.45■□□□□ 0.22
TRIM4-202ENST00000354241 E7EUB6 86 aa16.44■□□□□ 0.22
TRIM4-202ENST00000354241 RRHO14718 337 aa16.44■□□□□ 0.22
TRIM4-202ENST00000354241 NBR2O15453 112 aa16.44■□□□□ 0.22
TRIM4-202ENST00000354241 ACTL6BO94805 426 aa16.44■□□□□ 0.22
TRIM4-202ENST00000354241 IFNA5P01569 189 aa16.44■□□□□ 0.22
TRIM4-202ENST00000354241 GNB1P62873 340 aa16.44■□□□□ 0.22
TRIM4-202ENST00000354241 BRD3OSQ6XYD6 125 aa16.44■□□□□ 0.22
TRIM4-202ENST00000354241 PPP1R27Q86WC6 154 aa16.44■□□□□ 0.22
TRIM4-202ENST00000354241 KRTAP1-3Q8IUG1 177 aa16.44■□□□□ 0.22
TRIM4-202ENST00000354241 SH3BGRL3Q9H299 93 aa16.44■□□□□ 0.22
TRIM4-202ENST00000354241 SLC25A32Q9H2D1 315 aa16.44■□□□□ 0.22
TRIM4-202ENST00000354241 KIAA1456Q9P272 454 aa16.44■□□□□ 0.22
TRIM4-202ENST00000354241 NMBP08949 121 aa16.43■□□□□ 0.22
TRIM4-202ENST00000354241 IGHV4-38-2P0DP08 117 aa16.43■□□□□ 0.22
TRIM4-202ENST00000354241 NPY1RP25929 384 aa16.43■□□□□ 0.22
TRIM4-202ENST00000354241 RAB11AP62491 216 aa16.43■□□□□ 0.22
TRIM4-202ENST00000354241 ETV3LQ6ZN32 361 aa16.43■□□□□ 0.22
TRIM4-202ENST00000354241 PINX1Q96BK5 328 aaKnown RBP16.43■□□□□ 0.22
TRIM4-202ENST00000354241 CGB1A6NKQ9 187 aa16.43■□□□□ 0.22
TRIM4-202ENST00000354241 TGFAP01135 160 aa16.43■□□□□ 0.22
TRIM4-202ENST00000354241 BRS3P32247 399 aa16.43■□□□□ 0.22
TRIM4-202ENST00000354241 TMEM170AQ8WVE7 144 aa16.43■□□□□ 0.22
TRIM4-202ENST00000354241 NAV2Q8IVL1 2488 aa16.42■□□□□ 0.22
TRIM4-202ENST00000354241 A0A1W2PN81 502 aa16.42■□□□□ 0.22
TRIM4-202ENST00000354241 SCAF4O95104 1147 aaKnown RBP16.42■□□□□ 0.22
TRIM4-202ENST00000354241 CA2P00918 260 aa16.42■□□□□ 0.22
TRIM4-202ENST00000354241 IFNA4P05014 189 aa16.42■□□□□ 0.22
TRIM4-202ENST00000354241 TMEM11P17152 192 aa16.42■□□□□ 0.22
TRIM4-202ENST00000354241 ATP6V0CP27449 155 aa16.42■□□□□ 0.22
TRIM4-202ENST00000354241 CHRNA7P36544 502 aa16.42■□□□□ 0.22
TRIM4-202ENST00000354241 ATP6V1FQ16864 119 aa16.42■□□□□ 0.22
TRIM4-202ENST00000354241 FAM120AOSQ5T036 256 aa16.42■□□□□ 0.22
TRIM4-202ENST00000354241 PLXNB1O43157 2135 aa16.42■□□□□ 0.22
TRIM4-202ENST00000354241 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.41■□□□□ 0.225e-7■■■□□ 18.8
TRIM4-202ENST00000354241 UBE2L5PA0A1B0GUS4 154 aa16.41■□□□□ 0.22
TRIM4-202ENST00000354241 SEC11BP0C7V7 166 aa16.41■□□□□ 0.22
TRIM4-202ENST00000354241 SPP1P10451 314 aa16.41■□□□□ 0.22
TRIM4-202ENST00000354241 MAS1LP35410 378 aa16.41■□□□□ 0.22
TRIM4-202ENST00000354241 RPL27AP46776 148 aaKnown RBP16.41■□□□□ 0.22
TRIM4-202ENST00000354241 NPBQ8NG41 125 aa16.41■□□□□ 0.22
TRIM4-202ENST00000354241 SCGB1C1Q8TD33 95 aa16.41■□□□□ 0.22
TRIM4-202ENST00000354241 RNF141Q8WVD5 230 aa16.41■□□□□ 0.22
TRIM4-202ENST00000354241 TMEM147Q9BVK8 224 aa16.41■□□□□ 0.22
TRIM4-202ENST00000354241 APCP25054 2843 aa16.41■□□□□ 0.22
TRIM4-202ENST00000354241 NDUFA3O95167 84 aa16.41■□□□□ 0.22
TRIM4-202ENST00000354241 AVPP01185 164 aa16.41■□□□□ 0.22
TRIM4-202ENST00000354241 FAM106CPP0CH98 169 aa16.41■□□□□ 0.22
TRIM4-202ENST00000354241 IGHV4-31P0DP07 118 aa16.41■□□□□ 0.22
TRIM4-202ENST00000354241 ERHP84090 104 aaKnown RBP16.41■□□□□ 0.22
TRIM4-202ENST00000354241 RUNX1Q01196 453 aa16.41■□□□□ 0.22
TRIM4-202ENST00000354241 EBI3Q14213 229 aa16.41■□□□□ 0.22
TRIM4-202ENST00000354241 TMEM249Q2WGJ8 235 aa16.41■□□□□ 0.22
TRIM4-202ENST00000354241 CXorf58Q96LI9 332 aa16.41■□□□□ 0.22
TRIM4-202ENST00000354241 RFNGQ9Y644 331 aa16.41■□□□□ 0.22
TRIM4-202ENST00000354241 A0A1B0GW64 132 aa16.4■□□□□ 0.22
TRIM4-202ENST00000354241 FCN1O00602 326 aa16.4■□□□□ 0.22
TRIM4-202ENST00000354241 SNCAP37840 140 aa16.4■□□□□ 0.22
TRIM4-202ENST00000354241 COMPP49747 757 aaPredicted RBP16.4■□□□□ 0.22
TRIM4-202ENST00000354241 UQCC1Q9NVA1 299 aa16.4■□□□□ 0.22
TRIM4-202ENST00000354241 PLA2G2EQ9NZK7 142 aa16.4■□□□□ 0.22
TRIM4-202ENST00000354241 NCBP2LA6PVI3 153 aaKnown RBP16.39■□□□□ 0.21
TRIM4-202ENST00000354241 Q8N6K4 173 aa16.39■□□□□ 0.21
TRIM4-202ENST00000354241 A0A0U1RQK1 487 aa16.39■□□□□ 0.21
TRIM4-202ENST00000354241 FAM157CP0CG43 387 aa16.39■□□□□ 0.21
TRIM4-202ENST00000354241 WT1-ASQ06250 92 aa16.39■□□□□ 0.21
TRIM4-202ENST00000354241 LRRC75BQ2VPJ9 315 aa16.39■□□□□ 0.21
TRIM4-202ENST00000354241 OR2G3Q8NGZ4 309 aa16.39■□□□□ 0.21
TRIM4-202ENST00000354241 LRRC20Q8TCA0 184 aa16.39■□□□□ 0.21
TRIM4-202ENST00000354241 GNPNAT1Q96EK6 184 aaPredicted RBP16.39■□□□□ 0.21
TRIM4-202ENST00000354241 WDR61Q9GZS3 305 aaKnown RBP16.39■□□□□ 0.21
TRIM4-202ENST00000354241 LINC00862A6NCI5 91 aa16.38■□□□□ 0.21
TRIM4-202ENST00000354241 INS-IGF2F8WCM5 200 aa16.38■□□□□ 0.21
TRIM4-202ENST00000354241 J3QLI3 93 aa16.38■□□□□ 0.21
TRIM4-202ENST00000354241 OR13C7P0DN81 318 aa16.38■□□□□ 0.21
TRIM4-202ENST00000354241 RNASE2P10153 161 aaKnown RBP16.38■□□□□ 0.21
TRIM4-202ENST00000354241 SULT1A2P50226 295 aa16.38■□□□□ 0.21
TRIM4-202ENST00000354241 C5orf64Q2M2E5 130 aa16.38■□□□□ 0.21
TRIM4-202ENST00000354241 TUSC1Q2TAM9 212 aa16.38■□□□□ 0.21
TRIM4-202ENST00000354241 KLF17Q5JT82 389 aaPredicted RBP16.38■□□□□ 0.21
TRIM4-202ENST00000354241 TMEM182Q6ZP80 229 aaPredicted RBP16.38■□□□□ 0.21
TRIM4-202ENST00000354241 SMCO3A2RU48 225 aa16.37■□□□□ 0.21
TRIM4-202ENST00000354241 ZNF705EA8MWA4 302 aaPredicted RBP16.37■□□□□ 0.21
TRIM4-202ENST00000354241 PRSS46E5RG02 174 aa16.37■□□□□ 0.21
TRIM4-202ENST00000354241 FGF16O43320 207 aa16.37■□□□□ 0.21
TRIM4-202ENST00000354241 CNIH1O95406 144 aa16.37■□□□□ 0.21
TRIM4-202ENST00000354241 BSXQ3C1V8 233 aa16.37■□□□□ 0.21
TRIM4-202ENST00000354241 C2orf83Q53S99 150 aa16.37■□□□□ 0.21
TRIM4-202ENST00000354241 RSG1Q9BU20 258 aa16.37■□□□□ 0.21
TRIM4-202ENST00000354241 REG1AP05451 166 aa16.37■□□□□ 0.21
TRIM4-202ENST00000354241 APELAP0DMC3 54 aa16.37■□□□□ 0.21
TRIM4-202ENST00000354241 MRPL41Q8IXM3 137 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms