RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 OR5T1Q8NG75 326 aa9.27□□□□□ -0.93
SNCA-202ENST00000345009 COQ8AQ8NI60 647 aa9.27□□□□□ -0.93
SNCA-202ENST00000345009 LSM10Q969L4 123 aaKnown RBP9.27□□□□□ -0.93
SNCA-202ENST00000345009 HINT2Q9BX68 163 aa9.27□□□□□ -0.93
SNCA-202ENST00000345009 ALX4Q9H161 411 aaPredicted RBP9.27□□□□□ -0.93
SNCA-202ENST00000345009 C20orf85Q9H1P6 137 aa9.27□□□□□ -0.93
SNCA-202ENST00000345009 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.27□□□□□ -0.93
SNCA-202ENST00000345009 COA4Q9NYJ1 87 aa9.27□□□□□ -0.93
SNCA-202ENST00000345009 SHPKQ9UHJ6 478 aa9.27□□□□□ -0.93
SNCA-202ENST00000345009 ZNF257Q9Y2Q1 563 aa9.27□□□□□ -0.93
SNCA-202ENST00000345009 FBXO7Q9Y3I1 522 aa9.27□□□□□ -0.93
SNCA-202ENST00000345009 WNK1Q9H4A3 2382 aa9.27□□□□□ -0.93
SNCA-202ENST00000345009 TRAV3A0A0B4J244 114 aa9.26□□□□□ -0.93
SNCA-202ENST00000345009 TEX50A0A1B0GTY4 177 aa9.26□□□□□ -0.93
SNCA-202ENST00000345009 C15orf61A6NNL5 157 aa9.26□□□□□ -0.93
SNCA-202ENST00000345009 NUDT19A8MXV4 375 aa9.26□□□□□ -0.93
SNCA-202ENST00000345009 BRI3O95415 125 aa9.26□□□□□ -0.93
SNCA-202ENST00000345009 IGKV1-5P01602 117 aa9.26□□□□□ -0.93
SNCA-202ENST00000345009 HLA-AP01891 365 aaKnown RBP9.26□□□□□ -0.93
SNCA-202ENST00000345009 OR4E1P0C645 316 aa9.26□□□□□ -0.93
SNCA-202ENST00000345009 DEFA4P12838 97 aa9.26□□□□□ -0.93
SNCA-202ENST00000345009 BTCP35070 178 aa9.26□□□□□ -0.93
SNCA-202ENST00000345009 CDX1P47902 265 aaPredicted RBP9.26□□□□□ -0.93
SNCA-202ENST00000345009 MECP2P51608 486 aaKnown RBP9.26□□□□□ -0.93
SNCA-202ENST00000345009 OR2B8PP59922 312 aa9.26□□□□□ -0.93
SNCA-202ENST00000345009 HSPE1P61604 102 aaKnown RBP9.26□□□□□ -0.93
SNCA-202ENST00000345009 SUPT4H1P63272 117 aaKnown RBP9.26□□□□□ -0.93
SNCA-202ENST00000345009 SSBP2P81877 361 aaPredicted RBP9.26□□□□□ -0.93
SNCA-202ENST00000345009 PPP1R1AQ13522 171 aa9.26□□□□□ -0.93
SNCA-202ENST00000345009 NSUN5P1Q3KNT7 163 aa9.26□□□□□ -0.93
SNCA-202ENST00000345009 C19orf54Q5BKX5 351 aa9.26□□□□□ -0.93
SNCA-202ENST00000345009 C10orf99Q6UWK7 81 aa9.26□□□□□ -0.93
SNCA-202ENST00000345009 ZNF429Q86V71 674 aa9.26□□□□□ -0.93
SNCA-202ENST00000345009 TTC9CQ8N5M4 171 aa9.26□□□□□ -0.93
SNCA-202ENST00000345009 FAM110DQ8TAY7 271 aaPredicted RBP9.26□□□□□ -0.93
SNCA-202ENST00000345009 CASTOR1Q8WTX7 329 aa9.26□□□□□ -0.93
SNCA-202ENST00000345009 TMEM14BQ9NUH8 114 aa9.26□□□□□ -0.93
SNCA-202ENST00000345009 NUDT15Q9NV35 164 aa9.26□□□□□ -0.93
SNCA-202ENST00000345009 TBC1D24Q9ULP9 559 aa9.26□□□□□ -0.93
SNCA-202ENST00000345009 NSG2Q9Y328 171 aa9.26□□□□□ -0.93
SNCA-202ENST00000345009 TET2Q6N021 2002 aaPredicted RBP9.26□□□□□ -0.93
SNCA-202ENST00000345009 TRAV6A0A075B6T7 132 aa9.25□□□□□ -0.93
SNCA-202ENST00000345009 C9orf170A2RU37 121 aa9.25□□□□□ -0.93
SNCA-202ENST00000345009 NPIPB5A8MRT5 1133 aa9.25□□□□□ -0.93
SNCA-202ENST00000345009 IFNA17P01571 189 aa9.25□□□□□ -0.93
SNCA-202ENST00000345009 TRGV3P03979 118 aa9.25□□□□□ -0.93
SNCA-202ENST00000345009 H2AFB2P0C5Z0 115 aa9.25□□□□□ -0.93
SNCA-202ENST00000345009 APELAP0DMC3 54 aa9.25□□□□□ -0.93
SNCA-202ENST00000345009 TPPP2P59282 170 aa9.25□□□□□ -0.93
SNCA-202ENST00000345009 RPL23AP62750 156 aaKnown RBP9.25□□□□□ -0.93
SNCA-202ENST00000345009 TCTEX1D4Q5JR98 221 aa9.25□□□□□ -0.93
SNCA-202ENST00000345009 C10orf55Q5SWW7 151 aa9.25□□□□□ -0.93
SNCA-202ENST00000345009 PLET1Q6UQ28 207 aa9.25□□□□□ -0.93
SNCA-202ENST00000345009 LYG2Q86SG7 212 aa9.25□□□□□ -0.93
SNCA-202ENST00000345009 SLC35G3Q8N808 338 aa9.25□□□□□ -0.93
SNCA-202ENST00000345009 LRTM2Q8N967 370 aa9.25□□□□□ -0.93
SNCA-202ENST00000345009 OR1L6Q8NGR2 347 aa9.25□□□□□ -0.93
SNCA-202ENST00000345009 USMG5Q96IX5 58 aa9.25□□□□□ -0.93
SNCA-202ENST00000345009 UBE2E2Q96LR5 201 aa9.25□□□□□ -0.93
SNCA-202ENST00000345009 PALMDQ9NP74 551 aa9.25□□□□□ -0.93
SNCA-202ENST00000345009 ENY2Q9NPA8 101 aa9.25□□□□□ -0.93
SNCA-202ENST00000345009 THYN1Q9P016 225 aa9.25□□□□□ -0.93
SNCA-202ENST00000345009 FLVCR2Q9UPI3 526 aa9.25□□□□□ -0.93
SNCA-202ENST00000345009 TMED3Q9Y3Q3 217 aa9.25□□□□□ -0.93
SNCA-202ENST00000345009 A0A0B4J293 547 aa9.24□□□□□ -0.93
SNCA-202ENST00000345009 C13orf42A0A1B0GVH6 325 aa9.24□□□□□ -0.93
SNCA-202ENST00000345009 A0A1W2PRX2 142 aa9.24□□□□□ -0.93
SNCA-202ENST00000345009 HMX3A6NHT5 357 aa9.24□□□□□ -0.93
SNCA-202ENST00000345009 TEX22C9J3V5 150 aa9.24□□□□□ -0.93
SNCA-202ENST00000345009 F8W735 103 aaPredicted RBP9.24□□□□□ -0.93
SNCA-202ENST00000345009 DUS4LO95620 317 aaKnown RBP9.24□□□□□ -0.93
SNCA-202ENST00000345009 IFNA21P01568 189 aa9.24□□□□□ -0.93
SNCA-202ENST00000345009 SULT1A3P0DMM9 295 aa9.24□□□□□ -0.93
SNCA-202ENST00000345009 SULT1A4P0DMN0 295 aa9.24□□□□□ -0.93
SNCA-202ENST00000345009 HIST1H1BP16401 226 aaKnown RBP9.24□□□□□ -0.93
SNCA-202ENST00000345009 ANXA7P20073 488 aaKnown RBP9.24□□□□□ -0.93
SNCA-202ENST00000345009 PSMB6P28072 239 aa9.24□□□□□ -0.93
SNCA-202ENST00000345009 ERHP84090 104 aaKnown RBP9.24□□□□□ -0.93
SNCA-202ENST00000345009 DHRS2Q13268 280 aa9.24□□□□□ -0.93
SNCA-202ENST00000345009 FAM209BQ5JX69 171 aa9.24□□□□□ -0.93
SNCA-202ENST00000345009 KLHL30-AS1Q8NEE0 82 aa9.24□□□□□ -0.93
SNCA-202ENST00000345009 DUSP18Q8NEJ0 188 aa9.24□□□□□ -0.93
SNCA-202ENST00000345009 LHFPL5Q8TAF8 219 aa9.24□□□□□ -0.93
SNCA-202ENST00000345009 MS4A10Q96PG2 267 aa9.24□□□□□ -0.93
SNCA-202ENST00000345009 PLEKHA3Q9HB20 300 aa9.24□□□□□ -0.93
SNCA-202ENST00000345009 NDUFA4L2Q9NRX3 87 aa9.24□□□□□ -0.93
SNCA-202ENST00000345009 A0A1B0GU03 582 aa9.23□□□□□ -0.93
SNCA-202ENST00000345009 FAM223BA6NKX1 122 aa9.23□□□□□ -0.93
SNCA-202ENST00000345009 SOX15O60248 233 aa9.23□□□□□ -0.93
SNCA-202ENST00000345009 CRYGCP07315 174 aa9.23□□□□□ -0.93
SNCA-202ENST00000345009 P0C879 139 aa9.23□□□□□ -0.93
SNCA-202ENST00000345009 OR13C7P0DN81 318 aa9.23□□□□□ -0.93
SNCA-202ENST00000345009 SNCAP37840 140 aa9.23□□□□□ -0.93
SNCA-202ENST00000345009 SUB1P53999 127 aaKnown RBP eCLIP9.23□□□□□ -0.93
SNCA-202ENST00000345009 SPCS3P61009 180 aa9.23□□□□□ -0.93
SNCA-202ENST00000345009 PRCDQ00LT1 54 aa9.23□□□□□ -0.93
SNCA-202ENST00000345009 IFITM3Q01628 133 aa9.23□□□□□ -0.93
SNCA-202ENST00000345009 ASPHD1Q5U4P2 390 aa9.23□□□□□ -0.93
SNCA-202ENST00000345009 LYZL2Q7Z4W2 148 aa9.23□□□□□ -0.93
SNCA-202ENST00000345009 FAM223AQ8IWN6 122 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms