RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.02□□□□□ -1.45
VCAN-202ENST00000342785 WDR31Q8NA23 367 aa6.02□□□□□ -1.45
VCAN-202ENST00000342785 HIST1H2BHQ93079 126 aa6.02□□□□□ -1.45
VCAN-202ENST00000342785 DMRTA2Q96SC8 542 aa6.02□□□□□ -1.45
VCAN-202ENST00000342785 HIST1H2BNQ99877 126 aa6.02□□□□□ -1.45
VCAN-202ENST00000342785 HIST1H2BMQ99879 126 aa6.02□□□□□ -1.45
VCAN-202ENST00000342785 C1QTNF9BB2RNN3 333 aa6.02□□□□□ -1.45
VCAN-202ENST00000342785 SLC17A3O00476 420 aa6.02□□□□□ -1.45
VCAN-202ENST00000342785 SRIP30626 198 aa6.02□□□□□ -1.45
VCAN-202ENST00000342785 CA7P43166 264 aa6.02□□□□□ -1.45
VCAN-202ENST00000342785 ATXN7O15265 892 aaPredicted RBP6.02□□□□□ -1.45
VCAN-202ENST00000342785 RBFOX2O43251 390 aaKnown RBP eCLIP6.02□□□□□ -1.45
VCAN-202ENST00000342785 REG1AP05451 166 aa6.02□□□□□ -1.45
VCAN-202ENST00000342785 IFI27L2Q9H2X8 130 aa6.02□□□□□ -1.45
VCAN-202ENST00000342785 M0QZK8 103 aa6.02□□□□□ -1.45
VCAN-202ENST00000342785 CDX4O14627 284 aaPredicted RBP6.02□□□□□ -1.45
VCAN-202ENST00000342785 GGCTO75223 188 aaKnown RBP6.02□□□□□ -1.45
VCAN-202ENST00000342785 DUTP33316 252 aaKnown RBP6.02□□□□□ -1.45
VCAN-202ENST00000342785 ERVFRD-1P60508 538 aa6.02□□□□□ -1.45
VCAN-202ENST00000342785 HEPN1Q6WQI6 88 aa6.02□□□□□ -1.45
VCAN-202ENST00000342785 Q6ZRM9 215 aa6.02□□□□□ -1.45
VCAN-202ENST00000342785 COLCA1Q6ZS62 124 aa6.02□□□□□ -1.45
VCAN-202ENST00000342785 LRRK1Q38SD2 2015 aa6.01□□□□□ -1.45
VCAN-202ENST00000342785 ORM1P02763 201 aa6.01□□□□□ -1.45
VCAN-202ENST00000342785 GPR6P46095 362 aaPredicted RBP6.01□□□□□ -1.45
VCAN-202ENST00000342785 GCSAMLQ5JQS6 135 aa6.01□□□□□ -1.45
VCAN-202ENST00000342785 BPIFA4PQ86YQ2 179 aa6.01□□□□□ -1.45
VCAN-202ENST00000342785 SCN8AQ9UQD0 1980 aa6.01□□□□□ -1.45
VCAN-202ENST00000342785 TRAV1-1A0A0B4J248 108 aa6.01□□□□□ -1.45
VCAN-202ENST00000342785 CSRP1P21291 193 aaKnown RBP6.01□□□□□ -1.45
VCAN-202ENST00000342785 RPL30P62888 115 aaKnown RBP6.01□□□□□ -1.45
VCAN-202ENST00000342785 HERPUD1Q15011 391 aa6.01□□□□□ -1.45
VCAN-202ENST00000342785 MORN2Q502X0 79 aa6.01□□□□□ -1.45
VCAN-202ENST00000342785 CCDC144NLQ6NUI1 221 aa6.01□□□□□ -1.45
VCAN-202ENST00000342785 LIME1Q9H400 295 aa6.01□□□□□ -1.45
VCAN-202ENST00000342785 ANAPC10Q9UM13 185 aa6.01□□□□□ -1.45
VCAN-202ENST00000342785 A0A0G2JRQ6 117 aa6.01□□□□□ -1.45
VCAN-202ENST00000342785 TEX50A0A1B0GTY4 177 aa6.01□□□□□ -1.45
VCAN-202ENST00000342785 YPEL1O60688 119 aa6.01□□□□□ -1.45
VCAN-202ENST00000342785 KHDC1LQ5JSQ8 128 aa6.01□□□□□ -1.45
VCAN-202ENST00000342785 FAM90A1Q86YD7 464 aa6.01□□□□□ -1.45
VCAN-202ENST00000342785 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.01□□□□□ -1.45
VCAN-202ENST00000342785 YPEL2Q96QA6 119 aa6.01□□□□□ -1.45
VCAN-202ENST00000342785 PROK2Q9HC23 129 aa6.01□□□□□ -1.45
VCAN-202ENST00000342785 SCO2A0A1W2PP80 73 aa6.01□□□□□ -1.45
VCAN-202ENST00000342785 ARF6P62330 175 aa6.01□□□□□ -1.45
VCAN-202ENST00000342785 PRNTQ86SH4 94 aa6.01□□□□□ -1.45
VCAN-202ENST00000342785 VPS25Q9BRG1 176 aa6.01□□□□□ -1.45
VCAN-202ENST00000342785 PLXNA4Q9HCM2 1894 aa6.01□□□□□ -1.45
VCAN-202ENST00000342785 OR2J3O76001 311 aa6.01□□□□□ -1.45
VCAN-202ENST00000342785 C1QTNF9P0C862 333 aa6.01□□□□□ -1.45
VCAN-202ENST00000342785 PTTG1IPP53801 180 aa6.01□□□□□ -1.45
VCAN-202ENST00000342785 Q6ZS49 121 aa6.01□□□□□ -1.45
VCAN-202ENST00000342785 TMEM144Q7Z5S9 345 aa6.01□□□□□ -1.45
VCAN-202ENST00000342785 GSX1Q9H4S2 264 aaPredicted RBP6.01□□□□□ -1.45
VCAN-202ENST00000342785 HEATR1Q9H583 2144 aaKnown RBP6.01□□□□□ -1.45
VCAN-202ENST00000342785 PPIAL4CA0A0B4J2A2 164 aa6□□□□□ -1.45
VCAN-202ENST00000342785 PGPEP1LA6NFU8 196 aa6□□□□□ -1.45
VCAN-202ENST00000342785 C5orf52A6NGY3 159 aa6□□□□□ -1.45
VCAN-202ENST00000342785 SRRM5B3KS81 715 aa6□□□□□ -1.45
VCAN-202ENST00000342785 BMPR1BO00238 502 aa6□□□□□ -1.45
VCAN-202ENST00000342785 MOSP00540 346 aa6□□□□□ -1.45
VCAN-202ENST00000342785 PPIAL4GP0DN37 164 aa6□□□□□ -1.45
VCAN-202ENST00000342785 SELLP14151 372 aa6□□□□□ -1.45
VCAN-202ENST00000342785 KIR2DL2P43627 348 aaPredicted RBP6□□□□□ -1.45
VCAN-202ENST00000342785 PEAR1Q5VY43 1037 aaPredicted RBP6□□□□□ -1.45
VCAN-202ENST00000342785 ZCCHC24Q8N2G6 241 aaKnown RBP6□□□□□ -1.45
VCAN-202ENST00000342785 IMMP2LQ96T52 175 aa6□□□□□ -1.45
VCAN-202ENST00000342785 IGKV1-6A0A0C4DH72 117 aa6□□□□□ -1.45
VCAN-202ENST00000342785 LY6G6EA0A0G2JKS1 128 aa6□□□□□ -1.45
VCAN-202ENST00000342785 F2RL2O00254 374 aa6□□□□□ -1.45
VCAN-202ENST00000342785 TMEM50AO95807 157 aa6□□□□□ -1.45
VCAN-202ENST00000342785 PRSS1P07477 247 aa6□□□□□ -1.45
VCAN-202ENST00000342785 CCL3L1P16619 93 aa6□□□□□ -1.45
VCAN-202ENST00000342785 CBLN4Q9NTU7 201 aa6□□□□□ -1.45
VCAN-202ENST00000342785 TMEM106BQ9NUM4 274 aa6□□□□□ -1.45
VCAN-202ENST00000342785 U3KQA8 63 aa6□□□□□ -1.45
VCAN-202ENST00000342785 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6□□□□□ -1.45
VCAN-202ENST00000342785 CEACAM1P13688 526 aa6□□□□□ -1.45
VCAN-202ENST00000342785 TMEM14EPQ6UXP3 125 aa6□□□□□ -1.45
VCAN-202ENST00000342785 C20orf204Q6ZNR8 217 aa6□□□□□ -1.45
VCAN-202ENST00000342785 SNRNP40Q96DI7 357 aaKnown RBP6□□□□□ -1.45
VCAN-202ENST00000342785 RBM14Q96PK6 669 aaKnown RBP6□□□□□ -1.45
VCAN-202ENST00000342785 MALRD1Q5VYJ5 2156 aa6□□□□□ -1.45
VCAN-202ENST00000342785 TRBV24-1A0A075B6N3 115 aa6□□□□□ -1.45
VCAN-202ENST00000342785 TRBV6-6A0A0A6YYG2 114 aa6□□□□□ -1.45
VCAN-202ENST00000342785 CXCL1P09341 107 aa6□□□□□ -1.45
VCAN-202ENST00000342785 TMEM177Q53S58 311 aa6□□□□□ -1.45
VCAN-202ENST00000342785 MIR17HGQ75NE6 70 aa6□□□□□ -1.45
VCAN-202ENST00000342785 GBGT1Q8N5D6 347 aa6□□□□□ -1.45
VCAN-202ENST00000342785 SAA2-SAA4A0A096LPE2 208 aa6□□□□□ -1.45
VCAN-202ENST00000342785 UBE2CO00762 179 aa6□□□□□ -1.45
VCAN-202ENST00000342785 OR9G9P0C7N8 305 aa6□□□□□ -1.45
VCAN-202ENST00000342785 SAA2P0DJI9 122 aaPredicted RBP6□□□□□ -1.45
VCAN-202ENST00000342785 FOLR2P14207 255 aa6□□□□□ -1.45
VCAN-202ENST00000342785 FOSL1P15407 271 aa6□□□□□ -1.45
VCAN-202ENST00000342785 OR4C5Q8NGB2 326 aa6□□□□□ -1.45
VCAN-202ENST00000342785 ELOVL1Q9BW60 279 aa6□□□□□ -1.45
VCAN-202ENST00000342785 MRPL32Q9BYC8 188 aaKnown RBP6□□□□□ -1.45
VCAN-202ENST00000342785 LPAR2Q9HBW0 351 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms