RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 BLNKQ8WV28 456 aa9.89□□□□□ -0.83
RTN3-203ENST00000341307 TAAR6Q96RI8 345 aa9.89□□□□□ -0.83
RTN3-203ENST00000341307 PNRC2Q9NPJ4 139 aaKnown RBP9.89□□□□□ -0.83
RTN3-203ENST00000341307 E9PLN8 166 aa9.88□□□□□ -0.83
RTN3-203ENST00000341307 PDE6DO43924 150 aa9.88□□□□□ -0.83
RTN3-203ENST00000341307 CXCL13O43927 109 aa9.88□□□□□ -0.83
RTN3-203ENST00000341307 NEURL1O76050 574 aa9.88□□□□□ -0.83
RTN3-203ENST00000341307 PPYP01298 95 aa9.88□□□□□ -0.83
RTN3-203ENST00000341307 HERV-K104P61576 105 aa9.88□□□□□ -0.83
RTN3-203ENST00000341307 OR10G9Q8NGN4 311 aa9.88□□□□□ -0.83
RTN3-203ENST00000341307 OR10G7Q8NGN6 311 aa9.88□□□□□ -0.83
RTN3-203ENST00000341307 PERPQ96FX8 193 aa9.88□□□□□ -0.83
RTN3-203ENST00000341307 NAA38Q9BRA0 125 aaKnown RBP9.88□□□□□ -0.83
RTN3-203ENST00000341307 QTRT1Q9BXR0 403 aaKnown RBP9.88□□□□□ -0.83
RTN3-203ENST00000341307 SS18L2Q9UHA2 77 aa9.88□□□□□ -0.83
RTN3-203ENST00000341307 MAP1BP46821 2468 aaKnown RBP9.88□□□□□ -0.83
RTN3-203ENST00000341307 OR4C46A6NHA9 309 aa9.88□□□□□ -0.83
RTN3-203ENST00000341307 K7EN84 100 aa9.88□□□□□ -0.83
RTN3-203ENST00000341307 IAPPP10997 89 aa9.88□□□□□ -0.83
RTN3-203ENST00000341307 ZNF121P58317 390 aaPredicted RBP9.88□□□□□ -0.83
RTN3-203ENST00000341307 HIST1H1AQ02539 215 aaPredicted RBP9.88□□□□□ -0.83
RTN3-203ENST00000341307 TNXAQ16473 311 aa9.88□□□□□ -0.83
RTN3-203ENST00000341307 RAB40CQ96S21 281 aa9.88□□□□□ -0.83
RTN3-203ENST00000341307 SLC7A10Q9NS82 523 aa9.88□□□□□ -0.83
RTN3-203ENST00000341307 PLEK2Q9NYT0 353 aa9.88□□□□□ -0.83
RTN3-203ENST00000341307 EPG5Q9HCE0 2579 aa9.88□□□□□ -0.83
RTN3-203ENST00000341307 LRP5LA4QPB2 252 aa9.87□□□□□ -0.83
RTN3-203ENST00000341307 PSMB11A5LHX3 300 aa9.87□□□□□ -0.83
RTN3-203ENST00000341307 KLRC4-KLRK1H3BQV0 150 aa9.87□□□□□ -0.83
RTN3-203ENST00000341307 H3BUT2 72 aa9.87□□□□□ -0.83
RTN3-203ENST00000341307 TLX3O43711 291 aaPredicted RBP9.87□□□□□ -0.83
RTN3-203ENST00000341307 HLA-DRB1P01911 266 aa9.87□□□□□ -0.83
RTN3-203ENST00000341307 CRYBB3P26998 211 aa9.87□□□□□ -0.83
RTN3-203ENST00000341307 CEBPDP49716 269 aaPredicted RBP9.87□□□□□ -0.83
RTN3-203ENST00000341307 RPL24P83731 157 aaKnown RBP9.87□□□□□ -0.83
RTN3-203ENST00000341307 PMP22Q01453 160 aa9.87□□□□□ -0.83
RTN3-203ENST00000341307 TGFBR3Q03167 851 aa9.87□□□□□ -0.83
RTN3-203ENST00000341307 ITPR1Q14643 2758 aa9.87□□□□□ -0.83
RTN3-203ENST00000341307 MMD2Q8IY49 270 aa9.87□□□□□ -0.83
RTN3-203ENST00000341307 OR2K2Q8NGT1 345 aa9.87□□□□□ -0.83
RTN3-203ENST00000341307 OR10D3Q8NH80 312 aa9.87□□□□□ -0.83
RTN3-203ENST00000341307 MBD6Q96DN6 1003 aa9.87□□□□□ -0.83
RTN3-203ENST00000341307 SPATA25Q9BR10 227 aa9.87□□□□□ -0.83
RTN3-203ENST00000341307 SCRT2Q9NQ03 307 aa9.87□□□□□ -0.83
RTN3-203ENST00000341307 IL36GQ9NZH8 169 aa9.87□□□□□ -0.83
RTN3-203ENST00000341307 TIMM9Q9Y5J7 89 aa9.87□□□□□ -0.83
RTN3-203ENST00000341307 MED13Q9UHV7 2174 aa9.87□□□□□ -0.83
RTN3-203ENST00000341307 ZNF816-ZNF321PA0A0X1KG74 233 aa9.87□□□□□ -0.83
RTN3-203ENST00000341307 SPINK4O60575 86 aa9.87□□□□□ -0.83
RTN3-203ENST00000341307 SRYQ05066 204 aa9.87□□□□□ -0.83
RTN3-203ENST00000341307 IZUMO4Q1ZYL8 232 aa9.87□□□□□ -0.83
RTN3-203ENST00000341307 ABHD17BQ5VST6 288 aa9.87□□□□□ -0.83
RTN3-203ENST00000341307 CACNG8Q8WXS5 425 aa9.87□□□□□ -0.83
RTN3-203ENST00000341307 TMEM54Q969K7 222 aa9.87□□□□□ -0.83
RTN3-203ENST00000341307 JKAMPQ9P055 326 aa9.87□□□□□ -0.83
RTN3-203ENST00000341307 SPENQ96T58 3664 aaKnown RBP9.86□□□□□ -0.83
RTN3-203ENST00000341307 RTTNQ86VV8 2226 aa9.86□□□□□ -0.83
RTN3-203ENST00000341307 URB1O60287 2271 aaKnown RBP9.86□□□□□ -0.83
RTN3-203ENST00000341307 TMEM189A5PLL7 270 aa9.86□□□□□ -0.83
RTN3-203ENST00000341307 C21orf140B9A014 251 aa9.86□□□□□ -0.83
RTN3-203ENST00000341307 F5H5K5 113 aa9.86□□□□□ -0.83
RTN3-203ENST00000341307 ZNF207O43670 478 aaKnown RBP9.86□□□□□ -0.83
RTN3-203ENST00000341307 MT-ND6P03923 174 aa9.86□□□□□ -0.83
RTN3-203ENST00000341307 HERV-K104P63124 156 aa9.86□□□□□ -0.83
RTN3-203ENST00000341307 SRSF6Q13247 344 aaKnown RBP9.86□□□□□ -0.83
RTN3-203ENST00000341307 MRPL54Q6P161 138 aaKnown RBP9.86□□□□□ -0.83
RTN3-203ENST00000341307 ZNF818PQ6ZRF7 136 aa9.86□□□□□ -0.83
RTN3-203ENST00000341307 DTX1Q86Y01 620 aa9.86□□□□□ -0.83
RTN3-203ENST00000341307 OR1F12Q8NHA8 337 aa9.86□□□□□ -0.83
RTN3-203ENST00000341307 C18orf32Q8TCD1 76 aa9.86□□□□□ -0.83
RTN3-203ENST00000341307 NABP1Q96AH0 204 aa9.86□□□□□ -0.83
RTN3-203ENST00000341307 PSENENQ9NZ42 101 aa9.86□□□□□ -0.83
RTN3-203ENST00000341307 ARL2-SNX15V9GYD0 113 aa9.86□□□□□ -0.83
RTN3-203ENST00000341307 RBMXL2O75526 392 aaKnown RBP9.86□□□□□ -0.83
RTN3-203ENST00000341307 CD1BP29016 333 aa9.86□□□□□ -0.83
RTN3-203ENST00000341307 HBG1P69891 147 aa9.86□□□□□ -0.83
RTN3-203ENST00000341307 HBG2P69892 147 aa9.86□□□□□ -0.83
RTN3-203ENST00000341307 OR1C1Q15619 314 aa9.86□□□□□ -0.83
RTN3-203ENST00000341307 RPEL1Q2QD12 228 aa9.86□□□□□ -0.83
RTN3-203ENST00000341307 SPATA31B1PQ5VZV4 182 aa9.86□□□□□ -0.83
RTN3-203ENST00000341307 Q6ZRM9 215 aa9.86□□□□□ -0.83
RTN3-203ENST00000341307 C2orf91Q6ZV80 131 aa9.86□□□□□ -0.83
RTN3-203ENST00000341307 LINC00470Q9BZP3 86 aa9.86□□□□□ -0.83
RTN3-203ENST00000341307 KCNIP2Q9NS61 270 aa9.86□□□□□ -0.83
RTN3-203ENST00000341307 NCOA6Q14686 2063 aaPredicted RBP9.85□□□□□ -0.83
RTN3-203ENST00000341307 J3KRW8 73 aa9.85□□□□□ -0.83
RTN3-203ENST00000341307 M0R2Z0 102 aa9.85□□□□□ -0.83
RTN3-203ENST00000341307 DHHO43323 396 aa9.85□□□□□ -0.83
RTN3-203ENST00000341307 IGHV3-9P01782 118 aa9.85□□□□□ -0.83
RTN3-203ENST00000341307 PATE4P0C8F1 98 aa9.85□□□□□ -0.83
RTN3-203ENST00000341307 SLC25A6P12236 298 aa9.85□□□□□ -0.83
RTN3-203ENST00000341307 FCGR2AP12318 317 aa9.85□□□□□ -0.83
RTN3-203ENST00000341307 CCL1P22362 96 aa9.85□□□□□ -0.83
RTN3-203ENST00000341307 GPR183P32249 361 aa9.85□□□□□ -0.83
RTN3-203ENST00000341307 MAGEA5P43359 124 aa9.85□□□□□ -0.83
RTN3-203ENST00000341307 GPM6AP51674 278 aa9.85□□□□□ -0.83
RTN3-203ENST00000341307 LTC4SQ16873 150 aa9.85□□□□□ -0.83
RTN3-203ENST00000341307 ZDHHC23Q8IYP9 409 aa9.85□□□□□ -0.83
RTN3-203ENST00000341307 PSG8Q9UQ74 426 aa9.85□□□□□ -0.83
RTN3-203ENST00000341307 SSUH2Q9Y2M2 353 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms