RNA–Protein interactions for RNA: ENST00000341259.6

SH2B3-201, Transcript of SH2B adaptor protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2B3, Length 5,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B3-201ENST00000341259 SRSF12Q8WXF0 261 aaKnown RBP16.13■□□□□ 0.17
SH2B3-201ENST00000341259 CDC42EP3Q9UKI2 254 aa16.13■□□□□ 0.17
SH2B3-201ENST00000341259 VENTXO95231 258 aa16.13■□□□□ 0.17
SH2B3-201ENST00000341259 RELQ04864 619 aaPredicted RBP16.13■□□□□ 0.17
SH2B3-201ENST00000341259 SRSF7Q16629 238 aaKnown RBP eCLIP16.13■□□□□ 0.17
SH2B3-201ENST00000341259 MBNL2Q5VZF2 373 aaKnown RBP16.13■□□□□ 0.17
SH2B3-201ENST00000341259 CLDND2Q8NHS1 167 aa16.13■□□□□ 0.17
SH2B3-201ENST00000341259 RP1P56715 2156 aa16.13■□□□□ 0.17
SH2B3-201ENST00000341259 RALGAPA1Q6GYQ0 2036 aa16.13■□□□□ 0.17
SH2B3-201ENST00000341259 MAS1LP35410 378 aa16.13■□□□□ 0.17
SH2B3-201ENST00000341259 HERVK_113P61574 105 aa16.13■□□□□ 0.17
SH2B3-201ENST00000341259 FAM106AQ4KMX7 169 aa16.13■□□□□ 0.17
SH2B3-201ENST00000341259 LBHQ53QV2 105 aaPredicted RBP16.13■□□□□ 0.17
SH2B3-201ENST00000341259 SLC25A33Q9BSK2 321 aa16.13■□□□□ 0.17
SH2B3-201ENST00000341259 F8VVB4 439 aa16.12■□□□□ 0.17
SH2B3-201ENST00000341259 F8VWA3 439 aa16.12■□□□□ 0.17
SH2B3-201ENST00000341259 IGHV3-23P01764 117 aa16.12■□□□□ 0.17
SH2B3-201ENST00000341259 IGHV3-35A0A0C4DH35 117 aa16.12■□□□□ 0.17
SH2B3-201ENST00000341259 IGHV1-46P01743 117 aa16.12■□□□□ 0.17
SH2B3-201ENST00000341259 TIMP3P35625 211 aa16.12■□□□□ 0.17
SH2B3-201ENST00000341259 RNF144BQ7Z419 303 aa16.12■□□□□ 0.17
SH2B3-201ENST00000341259 LHFPL1Q86WI0 220 aa16.12■□□□□ 0.17
SH2B3-201ENST00000341259 UPK2O00526 184 aa16.12■□□□□ 0.17
SH2B3-201ENST00000341259 OR4D5Q8NGN0 318 aa16.12■□□□□ 0.17
SH2B3-201ENST00000341259 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.12■□□□□ 0.17
SH2B3-201ENST00000341259 RNF224P0DH78 156 aa16.12■□□□□ 0.17
SH2B3-201ENST00000341259 RAB9AP51151 201 aa16.12■□□□□ 0.17
SH2B3-201ENST00000341259 NPPCP23582 126 aa16.11■□□□□ 0.17
SH2B3-201ENST00000341259 RPS20P60866 119 aaKnown RBP16.11■□□□□ 0.17
SH2B3-201ENST00000341259 S4R3C0 116 aa16.11■□□□□ 0.17
SH2B3-201ENST00000341259 CKS2P33552 79 aa16.11■□□□□ 0.17
SH2B3-201ENST00000341259 TEX29Q8N6K0 151 aa16.11■□□□□ 0.17
SH2B3-201ENST00000341259 TRGC1P0CF51 173 aa16.11■□□□□ 0.17
SH2B3-201ENST00000341259 FRMPD3Q5JV73 1810 aa16.11■□□□□ 0.17
SH2B3-201ENST00000341259 C15orf61A6NNL5 157 aa16.11■□□□□ 0.17
SH2B3-201ENST00000341259 E9PLN8 166 aa16.11■□□□□ 0.17
SH2B3-201ENST00000341259 RELBQ01201 579 aa16.11■□□□□ 0.17
SH2B3-201ENST00000341259 VKORC1Q9BQB6 163 aa16.11■□□□□ 0.17
SH2B3-201ENST00000341259 GCGP01275 180 aa16.1■□□□□ 0.17
SH2B3-201ENST00000341259 ZNF841Q6ZN19 808 aa16.1■□□□□ 0.17
SH2B3-201ENST00000341259 CD99P14209 185 aa16.1■□□□□ 0.17
SH2B3-201ENST00000341259 ANOS1P23352 680 aa16.1■□□□□ 0.17
SH2B3-201ENST00000341259 CDKN1AP38936 164 aa16.1■□□□□ 0.17
SH2B3-201ENST00000341259 CX3CL1P78423 397 aa16.1■□□□□ 0.17
SH2B3-201ENST00000341259 PLAURQ03405 335 aa16.1■□□□□ 0.17
SH2B3-201ENST00000341259 RNASEH2CQ8TDP1 164 aaKnown RBP16.1■□□□□ 0.17
SH2B3-201ENST00000341259 ID3Q02535 119 aa16.1■□□□□ 0.17
SH2B3-201ENST00000341259 FOXA2Q9Y261 457 aaPredicted RBP16.1■□□□□ 0.17
SH2B3-201ENST00000341259 LRTM2Q8N967 370 aa16.1■□□□□ 0.17
SH2B3-201ENST00000341259 C19orf67A6NJJ6 358 aa16.09■□□□□ 0.17
SH2B3-201ENST00000341259 TBR1Q16650 682 aa16.09■□□□□ 0.17
SH2B3-201ENST00000341259 IFITM10A6NMD0 228 aa16.09■□□□□ 0.17
SH2B3-201ENST00000341259 SRIP30626 198 aa16.09■□□□□ 0.17
SH2B3-201ENST00000341259 ATP5G3P48201 142 aa16.09■□□□□ 0.17
SH2B3-201ENST00000341259 QRFPP83859 136 aa16.09■□□□□ 0.17
SH2B3-201ENST00000341259 PRB3Q04118 309 aaPredicted RBP16.09■□□□□ 0.17
SH2B3-201ENST00000341259 RNFT1Q5M7Z0 435 aa16.09■□□□□ 0.17
SH2B3-201ENST00000341259 MIR17HGQ75NE6 70 aa16.09■□□□□ 0.17
SH2B3-201ENST00000341259 TICRRQ7Z2Z1 1910 aa16.09■□□□□ 0.17
SH2B3-201ENST00000341259 SCO2A0A1W2PP80 73 aa16.09■□□□□ 0.17
SH2B3-201ENST00000341259 SCGB1D4Q6XE38 83 aa16.09■□□□□ 0.17
SH2B3-201ENST00000341259 CACNG8Q8WXS5 425 aa16.09■□□□□ 0.17
SH2B3-201ENST00000341259 WFDC1Q9HC57 220 aa16.09■□□□□ 0.17
SH2B3-201ENST00000341259 CBLN4Q9NTU7 201 aa16.09■□□□□ 0.17
SH2B3-201ENST00000341259 SCN8AQ9UQD0 1980 aa16.09■□□□□ 0.17
SH2B3-201ENST00000341259 FOXL2NBQ6ZUU3 175 aa16.09■□□□□ 0.17
SH2B3-201ENST00000341259 ARPC1AQ92747 370 aa16.09■□□□□ 0.17
SH2B3-201ENST00000341259 DUTP33316 252 aaKnown RBP16.09■□□□□ 0.17
SH2B3-201ENST00000341259 SRSF6Q13247 344 aaKnown RBP16.09■□□□□ 0.17
SH2B3-201ENST00000341259 CACNA1EQ15878 2313 aa16.08■□□□□ 0.17
SH2B3-201ENST00000341259 TRBV9A0A0B4J1U6 114 aa16.08■□□□□ 0.17
SH2B3-201ENST00000341259 NBEAP1P0C6P0 100 aa16.08■□□□□ 0.17
SH2B3-201ENST00000341259 COTL1Q14019 142 aa16.08■□□□□ 0.17
SH2B3-201ENST00000341259 TMEM42Q69YG0 159 aa16.08■□□□□ 0.17
SH2B3-201ENST00000341259 ZFP30Q9Y2G7 519 aa16.08■□□□□ 0.17
SH2B3-201ENST00000341259 GATA2P23769 480 aaPredicted RBP16.08■□□□□ 0.16
SH2B3-201ENST00000341259 KIAA1644Q3SXP7 199 aa16.08■□□□□ 0.16
SH2B3-201ENST00000341259 TMEM133Q9H2Q1 129 aa16.08■□□□□ 0.16
SH2B3-201ENST00000341259 FBXL7Q9UJT9 491 aa16.08■□□□□ 0.16
SH2B3-201ENST00000341259 TRGV3P03979 118 aa16.08■□□□□ 0.16
SH2B3-201ENST00000341259 OR9G9P0C7N8 305 aa16.08■□□□□ 0.16
SH2B3-201ENST00000341259 SUPT4H1P63272 117 aaKnown RBP16.08■□□□□ 0.16
SH2B3-201ENST00000341259 ICAM4Q14773 271 aa16.08■□□□□ 0.16
SH2B3-201ENST00000341259 SIAH2O43255 324 aa16.07■□□□□ 0.16
SH2B3-201ENST00000341259 CDX1P47902 265 aaPredicted RBP16.07■□□□□ 0.16
SH2B3-201ENST00000341259 FAM168AQ92567 244 aa16.07■□□□□ 0.16
SH2B3-201ENST00000341259 NEU1Q99519 415 aa16.07■□□□□ 0.16
SH2B3-201ENST00000341259 PLXNA4Q9HCM2 1894 aa16.07■□□□□ 0.16
SH2B3-201ENST00000341259 SDK2Q58EX2 2172 aa16.07■□□□□ 0.16
SH2B3-201ENST00000341259 LYNX1G3V0Z9 82 aa16.07■□□□□ 0.16
SH2B3-201ENST00000341259 RBFOX2O43251 390 aaKnown RBP eCLIP16.07■□□□□ 0.168e-7■■□□□ 13.4
SH2B3-201ENST00000341259 CD55P08174 381 aa16.07■□□□□ 0.16
SH2B3-201ENST00000341259 LYNX1P0DP58 116 aa16.07■□□□□ 0.16
SH2B3-201ENST00000341259 CA7P43166 264 aa16.07■□□□□ 0.16
SH2B3-201ENST00000341259 SRSF3P84103 164 aaKnown RBP16.07■□□□□ 0.16
SH2B3-201ENST00000341259 PPP1R27Q86WC6 154 aa16.07■□□□□ 0.16
SH2B3-201ENST00000341259 GPR61Q9BZJ8 451 aa16.07■□□□□ 0.16
SH2B3-201ENST00000341259 LY6G6EA0A0G2JKS1 128 aa16.07■□□□□ 0.16
SH2B3-201ENST00000341259 GPX4P36969 197 aaPredicted RBP16.07■□□□□ 0.16
SH2B3-201ENST00000341259 SYT8Q8NBV8 401 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms