RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 CCR9P51686 369 aa7.2□□□□□ -1.26
ATXN3-201ENST00000340660 TMEM244Q5VVB8 128 aa7.2□□□□□ -1.26
ATXN3-201ENST00000340660 CGB2Q6NT52 195 aa7.2□□□□□ -1.26
ATXN3-201ENST00000340660 OR13C3Q8NGS6 347 aa7.2□□□□□ -1.26
ATXN3-201ENST00000340660 C5orf30Q96GV9 206 aa7.2□□□□□ -1.26
ATXN3-201ENST00000340660 GPER1Q99527 375 aa7.2□□□□□ -1.26
ATXN3-201ENST00000340660 SPACA1Q9HBV2 294 aa7.2□□□□□ -1.26
ATXN3-201ENST00000340660 PEX16Q9Y5Y5 336 aa7.2□□□□□ -1.26
ATXN3-201ENST00000340660 SSPOA2VEC9 5147 aa7.2□□□□□ -1.26
ATXN3-201ENST00000340660 TRAV9-2A0A087WT02 112 aa7.19□□□□□ -1.26
ATXN3-201ENST00000340660 A0A1W2PQL4 384 aaPredicted RBP7.19□□□□□ -1.26
ATXN3-201ENST00000340660 ZNF670-ZNF695F2Z2N8 137 aa7.19□□□□□ -1.26
ATXN3-201ENST00000340660 BAG2O95816 211 aa7.19□□□□□ -1.26
ATXN3-201ENST00000340660 IGKV3-20P01619 116 aa7.19□□□□□ -1.26
ATXN3-201ENST00000340660 EIF4EP06730 217 aaKnown RBP7.19□□□□□ -1.26
ATXN3-201ENST00000340660 CTSGP08311 255 aa7.19□□□□□ -1.26
ATXN3-201ENST00000340660 RASSF2P50749 326 aa7.19□□□□□ -1.26
ATXN3-201ENST00000340660 CBX3Q13185 183 aa7.19□□□□□ -1.26
ATXN3-201ENST00000340660 RTL8BQ17RB0 113 aa7.19□□□□□ -1.26
ATXN3-201ENST00000340660 YIF1BQ5BJH7 314 aa7.19□□□□□ -1.26
ATXN3-201ENST00000340660 CMTM1Q8IZ96 169 aa7.19□□□□□ -1.26
ATXN3-201ENST00000340660 PTX4Q96A99 478 aa7.19□□□□□ -1.26
ATXN3-201ENST00000340660 C7orf50Q9BRJ6 194 aaKnown RBP7.19□□□□□ -1.26
ATXN3-201ENST00000340660 METTL9Q9H1A3 318 aa7.19□□□□□ -1.26
ATXN3-201ENST00000340660 ABRACLQ9P1F3 81 aa7.19□□□□□ -1.26
ATXN3-201ENST00000340660 AP3M1Q9Y2T2 418 aa7.19□□□□□ -1.26
ATXN3-201ENST00000340660 LRRC42Q9Y546 428 aa7.19□□□□□ -1.26
ATXN3-201ENST00000340660 EBAG9O00559 213 aa7.18□□□□□ -1.26
ATXN3-201ENST00000340660 MRASO14807 208 aa7.18□□□□□ -1.26
ATXN3-201ENST00000340660 SOCS1O15524 211 aa7.18□□□□□ -1.26
ATXN3-201ENST00000340660 SULT1C4O75897 302 aa7.18□□□□□ -1.26
ATXN3-201ENST00000340660 NPPAP01160 153 aa7.18□□□□□ -1.26
ATXN3-201ENST00000340660 HLA-DRB4P13762 266 aa7.18□□□□□ -1.26
ATXN3-201ENST00000340660 CEACAM6P40199 344 aa7.18□□□□□ -1.26
ATXN3-201ENST00000340660 LRTM2Q8N967 370 aa7.18□□□□□ -1.26
ATXN3-201ENST00000340660 UBAC2Q8NBM4 344 aa7.18□□□□□ -1.26
ATXN3-201ENST00000340660 OR51A2Q8NGJ7 313 aa7.18□□□□□ -1.26
ATXN3-201ENST00000340660 CLN6Q9NWW5 311 aa7.18□□□□□ -1.26
ATXN3-201ENST00000340660 LY96Q9Y6Y9 160 aa7.18□□□□□ -1.26
ATXN3-201ENST00000340660 V9GYY5 206 aaPredicted RBP7.18□□□□□ -1.26
ATXN3-201ENST00000340660 HLA-DRB4X5D2U9 266 aa7.18□□□□□ -1.26
ATXN3-201ENST00000340660 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.17□□□□□ -1.26
ATXN3-201ENST00000340660 HELTA6NFD8 242 aa7.17□□□□□ -1.26
ATXN3-201ENST00000340660 METTL15A6NJ78 407 aa7.17□□□□□ -1.26
ATXN3-201ENST00000340660 ZNF705GA8MUZ8 300 aaPredicted RBP7.17□□□□□ -1.26
ATXN3-201ENST00000340660 H3BN98 237 aa7.17□□□□□ -1.26
ATXN3-201ENST00000340660 H3BNG1 76 aa7.17□□□□□ -1.26
ATXN3-201ENST00000340660 FCER2P06734 321 aa7.17□□□□□ -1.26
ATXN3-201ENST00000340660 GINS1Q14691 196 aa7.17□□□□□ -1.26
ATXN3-201ENST00000340660 TNFAIP8L3Q5GJ75 292 aa7.17□□□□□ -1.26
ATXN3-201ENST00000340660 GDF5OSQ5U4N7 250 aa7.17□□□□□ -1.26
ATXN3-201ENST00000340660 TMED4Q7Z7H5 227 aa7.17□□□□□ -1.26
ATXN3-201ENST00000340660 TBX5Q99593 518 aa7.17□□□□□ -1.26
ATXN3-201ENST00000340660 NIPSNAP1Q9BPW8 284 aa7.17□□□□□ -1.26
ATXN3-201ENST00000340660 SLC35B3Q9H1N7 401 aa7.17□□□□□ -1.26
ATXN3-201ENST00000340660 C21orf62Q9NYP8 219 aa7.17□□□□□ -1.26
ATXN3-201ENST00000340660 DENRO43583 198 aaKnown RBP7.16□□□□□ -1.26
ATXN3-201ENST00000340660 CCNB2O95067 398 aa7.16□□□□□ -1.26
ATXN3-201ENST00000340660 ATP6V1B2P21281 511 aa7.16□□□□□ -1.26
ATXN3-201ENST00000340660 DEFB1P60022 68 aa7.16□□□□□ -1.26
ATXN3-201ENST00000340660 RELQ04864 619 aaPredicted RBP7.16□□□□□ -1.26
ATXN3-201ENST00000340660 IFFO1Q0D2I5 559 aa7.16□□□□□ -1.26
ATXN3-201ENST00000340660 PPP1R8Q12972 351 aaKnown RBP7.16□□□□□ -1.26
ATXN3-201ENST00000340660 LCE1AQ5T7P2 110 aa7.16□□□□□ -1.26
ATXN3-201ENST00000340660 TPRA1Q86W33 373 aa7.16□□□□□ -1.26
ATXN3-201ENST00000340660 VKORC1L1Q8N0U8 176 aa7.16□□□□□ -1.26
ATXN3-201ENST00000340660 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.16□□□□□ -1.26
ATXN3-201ENST00000340660 OR2G2Q8NGZ5 317 aa7.16□□□□□ -1.26
ATXN3-201ENST00000340660 ATP6V0BQ99437 205 aa7.16□□□□□ -1.26
ATXN3-201ENST00000340660 UQCC2Q9BRT2 126 aa7.16□□□□□ -1.26
ATXN3-201ENST00000340660 LINC00467Q9BRT7 94 aa7.16□□□□□ -1.26
ATXN3-201ENST00000340660 ROPN1BQ9BZX4 212 aaPredicted RBP7.16□□□□□ -1.26
ATXN3-201ENST00000340660 SDHAF2Q9NX18 166 aa7.16□□□□□ -1.26
ATXN3-201ENST00000340660 THYN1Q9P016 225 aa7.16□□□□□ -1.26
ATXN3-201ENST00000340660 TNFRSF11BO00300 401 aa7.15□□□□□ -1.26
ATXN3-201ENST00000340660 ATP8B1O43520 1251 aa7.15□□□□□ -1.26
ATXN3-201ENST00000340660 DCTN3O75935 186 aa7.15□□□□□ -1.26
ATXN3-201ENST00000340660 RRASP10301 218 aa7.15□□□□□ -1.26
ATXN3-201ENST00000340660 GTF2F2P13984 249 aa7.15□□□□□ -1.26
ATXN3-201ENST00000340660 WHAMMP3Q1A5X7 153 aa7.15□□□□□ -1.26
ATXN3-201ENST00000340660 Q56UQ5 140 aa7.15□□□□□ -1.26
ATXN3-201ENST00000340660 COQ5Q5HYK3 327 aa7.15□□□□□ -1.26
ATXN3-201ENST00000340660 OSR1Q8TAX0 266 aaPredicted RBP7.15□□□□□ -1.26
ATXN3-201ENST00000340660 RFKQ969G6 155 aa7.15□□□□□ -1.26
ATXN3-201ENST00000340660 LGALS12Q96DT0 336 aa7.15□□□□□ -1.26
ATXN3-201ENST00000340660 CPNE2Q96FN4 548 aaPredicted RBP7.15□□□□□ -1.26
ATXN3-201ENST00000340660 IL4I1Q96RQ9 567 aa7.15□□□□□ -1.26
ATXN3-201ENST00000340660 THTPAQ9BU02 230 aa7.15□□□□□ -1.26
ATXN3-201ENST00000340660 SYNE2Q8WXH0 6885 aaKnown RBP7.15□□□□□ -1.27
ATXN3-201ENST00000340660 MUC17Q685J3 4493 aa7.14□□□□□ -1.27
ATXN3-201ENST00000340660 IGLC7A0M8Q6 106 aa7.14□□□□□ -1.27
ATXN3-201ENST00000340660 MFNGO00587 321 aa7.14□□□□□ -1.27
ATXN3-201ENST00000340660 NME4O00746 187 aa7.14□□□□□ -1.27
ATXN3-201ENST00000340660 SNRPGP62308 76 aaKnown RBP7.14□□□□□ -1.27
ATXN3-201ENST00000340660 HSD17B11Q8NBQ5 300 aa7.14□□□□□ -1.27
ATXN3-201ENST00000340660 OR5D14Q8NGL3 314 aa7.14□□□□□ -1.27
ATXN3-201ENST00000340660 OR6M1Q8NGM8 313 aa7.14□□□□□ -1.27
ATXN3-201ENST00000340660 Q96MT0 163 aa7.14□□□□□ -1.27
ATXN3-201ENST00000340660 OR51E2Q9H255 320 aa7.14□□□□□ -1.27
ATXN3-201ENST00000340660 MRPS18AQ9NVS2 196 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms