RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 TMEM61Q8N0U2 210 aa10.03□□□□□ -0.8
NUDCD3-201ENST00000338427 ZNF502Q8TBZ5 544 aa10.03□□□□□ -0.8
NUDCD3-201ENST00000338427 MOB3AQ96BX8 217 aa10.03□□□□□ -0.8
NUDCD3-201ENST00000338427 COMMD5Q9GZQ3 224 aa10.03□□□□□ -0.8
NUDCD3-201ENST00000338427 FXYD6Q9H0Q3 95 aa10.03□□□□□ -0.8
NUDCD3-201ENST00000338427 SRD5A3Q9H8P0 318 aa10.03□□□□□ -0.8
NUDCD3-201ENST00000338427 IGHV3OR16-8A0A075B7F1 116 aa10.02□□□□□ -0.81
NUDCD3-201ENST00000338427 A0A087WXM4 84 aa10.02□□□□□ -0.81
NUDCD3-201ENST00000338427 TRAPPC2P0DI81 140 aa10.02□□□□□ -0.81
NUDCD3-201ENST00000338427 TRAPPC2BP0DI82 140 aa10.02□□□□□ -0.81
NUDCD3-201ENST00000338427 HIST1H1BP16401 226 aaKnown RBP10.02□□□□□ -0.81
NUDCD3-201ENST00000338427 F2RP25116 425 aa10.02□□□□□ -0.81
NUDCD3-201ENST00000338427 VBP1P61758 197 aa10.02□□□□□ -0.81
NUDCD3-201ENST00000338427 PHLDA2Q53GA4 152 aa10.02□□□□□ -0.81
NUDCD3-201ENST00000338427 ZNF57Q68EA5 555 aaPredicted RBP10.02□□□□□ -0.81
NUDCD3-201ENST00000338427 BTNL8Q6UX41 500 aa10.02□□□□□ -0.81
NUDCD3-201ENST00000338427 OR5H2Q8NGV7 314 aa10.02□□□□□ -0.81
NUDCD3-201ENST00000338427 DGCR14Q96DF8 476 aaKnown RBP10.02□□□□□ -0.81
NUDCD3-201ENST00000338427 PLEKHA2Q9HB19 425 aa10.02□□□□□ -0.81
NUDCD3-201ENST00000338427 SLC2A8Q9NY64 477 aa10.02□□□□□ -0.81
NUDCD3-201ENST00000338427 TECRQ9NZ01 308 aaKnown RBP10.02□□□□□ -0.81
NUDCD3-201ENST00000338427 TRBV7-1A0A0A6YYK4 115 aa10.01□□□□□ -0.81
NUDCD3-201ENST00000338427 DHFRP00374 187 aa10.01□□□□□ -0.81
NUDCD3-201ENST00000338427 IFNA6P05013 189 aa10.01□□□□□ -0.81
NUDCD3-201ENST00000338427 SERPINE2P07093 398 aa10.01□□□□□ -0.81
NUDCD3-201ENST00000338427 HRH1P35367 487 aa10.01□□□□□ -0.81
NUDCD3-201ENST00000338427 FAM209BQ5JX69 171 aa10.01□□□□□ -0.81
NUDCD3-201ENST00000338427 SNX29P2Q8IUI4 249 aa10.01□□□□□ -0.81
NUDCD3-201ENST00000338427 OR6F1Q8NGZ6 308 aa10.01□□□□□ -0.81
NUDCD3-201ENST00000338427 GPX8Q8TED1 209 aa10.01□□□□□ -0.81
NUDCD3-201ENST00000338427 ISOC1Q96CN7 298 aa10.01□□□□□ -0.81
NUDCD3-201ENST00000338427 AIFM2Q9BRQ8 373 aa10.01□□□□□ -0.81
NUDCD3-201ENST00000338427 CHRDL1Q9BU40 450 aa10.01□□□□□ -0.81
NUDCD3-201ENST00000338427 FUNDC2Q9BWH2 189 aa10.01□□□□□ -0.81
NUDCD3-201ENST00000338427 QTRT1Q9BXR0 403 aaKnown RBP10.01□□□□□ -0.81
NUDCD3-201ENST00000338427 NAA50Q9GZZ1 169 aaKnown RBP10.01□□□□□ -0.81
NUDCD3-201ENST00000338427 NDUFA4L2Q9NRX3 87 aa10.01□□□□□ -0.81
NUDCD3-201ENST00000338427 OR51B2Q9Y5P1 312 aa10.01□□□□□ -0.81
NUDCD3-201ENST00000338427 EPPK1P58107 5090 aaKnown RBP10□□□□□ -0.81
NUDCD3-201ENST00000338427 OR2T8A6NH00 312 aa10□□□□□ -0.81
NUDCD3-201ENST00000338427 ZNF207O43670 478 aaKnown RBP10□□□□□ -0.81
NUDCD3-201ENST00000338427 HPGDSO60760 199 aa10□□□□□ -0.81
NUDCD3-201ENST00000338427 ELK1P19419 428 aa10□□□□□ -0.81
NUDCD3-201ENST00000338427 PTBP1P26599 531 aaKnown RBP eCLIP10□□□□□ -0.813e-8■■■□□ 16.1
NUDCD3-201ENST00000338427 RNASE12Q5GAN4 147 aaKnown RBP10□□□□□ -0.81
NUDCD3-201ENST00000338427 PLET1Q6UQ28 207 aa10□□□□□ -0.81
NUDCD3-201ENST00000338427 CROCCP3Q8IVE0 287 aa10□□□□□ -0.81
NUDCD3-201ENST00000338427 OR1L8Q8NGR8 309 aa10□□□□□ -0.81
NUDCD3-201ENST00000338427 CD300LFQ8TDQ1 290 aa10□□□□□ -0.81
NUDCD3-201ENST00000338427 SLC25A46Q96AG3 418 aa10□□□□□ -0.81
NUDCD3-201ENST00000338427 CXorf58Q96LI9 332 aa10□□□□□ -0.81
NUDCD3-201ENST00000338427 LCE6AA0A183 80 aa9.99□□□□□ -0.81
NUDCD3-201ENST00000338427 MARCH11A6NNE9 402 aa9.99□□□□□ -0.81
NUDCD3-201ENST00000338427 F8W735 103 aaPredicted RBP9.99□□□□□ -0.81
NUDCD3-201ENST00000338427 M0QYG6 137 aa9.99□□□□□ -0.81
NUDCD3-201ENST00000338427 GPR31O00270 319 aa9.99□□□□□ -0.81
NUDCD3-201ENST00000338427 IGKV1-39P01597 117 aa9.99□□□□□ -0.81
NUDCD3-201ENST00000338427 IGHV3-48P01763 117 aa9.99□□□□□ -0.81
NUDCD3-201ENST00000338427 IGKV1D-39P04432 117 aa9.99□□□□□ -0.81
NUDCD3-201ENST00000338427 C8orf88P0DMB2 117 aa9.99□□□□□ -0.81
NUDCD3-201ENST00000338427 IZUMO4Q1ZYL8 232 aa9.99□□□□□ -0.81
NUDCD3-201ENST00000338427 OR52B4Q8NGK2 314 aa9.99□□□□□ -0.81
NUDCD3-201ENST00000338427 SCARB1Q8WTV0 552 aa9.99□□□□□ -0.81
NUDCD3-201ENST00000338427 ZNF414Q96IQ9 312 aa9.99□□□□□ -0.81
NUDCD3-201ENST00000338427 COMMD9Q9P000 198 aa9.99□□□□□ -0.81
NUDCD3-201ENST00000338427 UBQLN2Q9UHD9 624 aa9.99□□□□□ -0.81
NUDCD3-201ENST00000338427 TGOLN2O43493 480 aa9.98□□□□□ -0.81
NUDCD3-201ENST00000338427 TMEM127O75204 238 aa9.98□□□□□ -0.81
NUDCD3-201ENST00000338427 SNAPC5O75971 98 aa9.98□□□□□ -0.81
NUDCD3-201ENST00000338427 ADMP35318 185 aa9.98□□□□□ -0.81
NUDCD3-201ENST00000338427 TAS2R46P59540 309 aa9.98□□□□□ -0.81
NUDCD3-201ENST00000338427 ERVK-16P61578 105 aa9.98□□□□□ -0.81
NUDCD3-201ENST00000338427 TSPAN5P62079 268 aa9.98□□□□□ -0.81
NUDCD3-201ENST00000338427 TBC1D26Q86UD7 250 aa9.98□□□□□ -0.81
NUDCD3-201ENST00000338427 LAX1Q8IWV1 398 aa9.98□□□□□ -0.81
NUDCD3-201ENST00000338427 GDPD1Q8N9F7 314 aa9.98□□□□□ -0.81
NUDCD3-201ENST00000338427 ZNF436Q9C0F3 470 aaPredicted RBP9.98□□□□□ -0.81
NUDCD3-201ENST00000338427 A8MWP6 167 aa9.97□□□□□ -0.81
NUDCD3-201ENST00000338427 K7EIM0 57 aa9.97□□□□□ -0.81
NUDCD3-201ENST00000338427 TNFAIP8O95379 198 aa9.97□□□□□ -0.81
NUDCD3-201ENST00000338427 PI3P19957 117 aa9.97□□□□□ -0.81
NUDCD3-201ENST00000338427 SPINK9Q5DT21 86 aa9.97□□□□□ -0.81
NUDCD3-201ENST00000338427 CMTM1Q8IZ96 169 aa9.97□□□□□ -0.81
NUDCD3-201ENST00000338427 UBAC2Q8NBM4 344 aa9.97□□□□□ -0.81
NUDCD3-201ENST00000338427 VN1R17PQ8TDU5 208 aa9.97□□□□□ -0.81
NUDCD3-201ENST00000338427 SRSF8Q9BRL6 282 aaKnown RBP9.97□□□□□ -0.81
NUDCD3-201ENST00000338427 C20orf24Q9BUV8 137 aa9.97□□□□□ -0.81
NUDCD3-201ENST00000338427 MRPL27Q9P0M9 148 aaKnown RBP9.97□□□□□ -0.81
NUDCD3-201ENST00000338427 F11RQ9Y624 299 aaKnown RBP9.97□□□□□ -0.81
NUDCD3-201ENST00000338427 IGHV3-49A0A0A0MS15 119 aa9.96□□□□□ -0.82
NUDCD3-201ENST00000338427 SMIM31A0A1B0GVY4 71 aa9.96□□□□□ -0.82
NUDCD3-201ENST00000338427 APOA1P02647 267 aa9.96□□□□□ -0.82
NUDCD3-201ENST00000338427 RBPMS2Q6ZRY4 209 aaKnown RBP9.96□□□□□ -0.82
NUDCD3-201ENST00000338427 SLC16A13Q7RTY0 426 aa9.96□□□□□ -0.82
NUDCD3-201ENST00000338427 SEC22AQ96IW7 307 aa9.96□□□□□ -0.82
NUDCD3-201ENST00000338427 OVOL2Q9BRP0 275 aa9.96□□□□□ -0.82
NUDCD3-201ENST00000338427 VCX3AQ9NNX9 186 aa9.96□□□□□ -0.82
NUDCD3-201ENST00000338427 C21orf62Q9NYP8 219 aa9.96□□□□□ -0.82
NUDCD3-201ENST00000338427 THYN1Q9P016 225 aa9.96□□□□□ -0.82
NUDCD3-201ENST00000338427 KLK11Q9UBX7 282 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms