RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 KRTAP10-3P60369 221 aa5.1□□□□□ -1.59
DEPDC4-201ENST00000299185 CX3CL1P78423 397 aa5.1□□□□□ -1.59
DEPDC4-201ENST00000299185 FXYD3Q14802 87 aa5.1□□□□□ -1.59
DEPDC4-201ENST00000299185 AANATQ16613 207 aa5.1□□□□□ -1.59
DEPDC4-201ENST00000299185 POU2AF1Q16633 256 aa5.1□□□□□ -1.59
DEPDC4-201ENST00000299185 TET2Q6N021 2002 aaPredicted RBP5.1□□□□□ -1.59
DEPDC4-201ENST00000299185 C11orf88Q6PI97 169 aa5.1□□□□□ -1.59
DEPDC4-201ENST00000299185 C18orf65Q6ZTR6 163 aa5.1□□□□□ -1.59
DEPDC4-201ENST00000299185 H2BFWTQ7Z2G1 175 aa5.1□□□□□ -1.59
DEPDC4-201ENST00000299185 SLC35E3Q7Z769 313 aa5.1□□□□□ -1.59
DEPDC4-201ENST00000299185 TMEM86BQ8N661 226 aa5.1□□□□□ -1.59
DEPDC4-201ENST00000299185 OR11H7Q8NGC8 314 aa5.1□□□□□ -1.59
DEPDC4-201ENST00000299185 COQ8AQ8NI60 647 aa5.1□□□□□ -1.59
DEPDC4-201ENST00000299185 TMEM167AQ8TBQ9 72 aa5.1□□□□□ -1.59
DEPDC4-201ENST00000299185 MITD1Q8WV92 249 aa5.1□□□□□ -1.59
DEPDC4-201ENST00000299185 SRSF12Q8WXF0 261 aaKnown RBP5.1□□□□□ -1.59
DEPDC4-201ENST00000299185 ARPC1AQ92747 370 aa5.1□□□□□ -1.59
DEPDC4-201ENST00000299185 TMEM56Q96MV1 263 aa5.1□□□□□ -1.59
DEPDC4-201ENST00000299185 OR2A7Q96R45 310 aa5.1□□□□□ -1.59
DEPDC4-201ENST00000299185 NPFFR1Q9GZQ6 430 aa5.1□□□□□ -1.59
DEPDC4-201ENST00000299185 GHITMQ9H3K2 345 aa5.1□□□□□ -1.59
DEPDC4-201ENST00000299185 POMT1Q9Y6A1 747 aa5.1□□□□□ -1.59
DEPDC4-201ENST00000299185 S4R3C0 116 aa5.1□□□□□ -1.59
DEPDC4-201ENST00000299185 TMEM56-RWDD3S4R434 201 aa5.1□□□□□ -1.59
DEPDC4-201ENST00000299185 COL6A5A8TX70 2615 aa5.1□□□□□ -1.59
DEPDC4-201ENST00000299185 PLXNB1O43157 2135 aa5.09□□□□□ -1.59
DEPDC4-201ENST00000299185 IGHV3-21A0A0B4J1V1 117 aa5.09□□□□□ -1.59
DEPDC4-201ENST00000299185 A0A0B4J2A0 478 aa5.09□□□□□ -1.59
DEPDC4-201ENST00000299185 CLDN34H7C241 214 aa5.09□□□□□ -1.59
DEPDC4-201ENST00000299185 TRIM77I1YAP6 450 aa5.09□□□□□ -1.59
DEPDC4-201ENST00000299185 FGF16O43320 207 aa5.09□□□□□ -1.59
DEPDC4-201ENST00000299185 SOX15O60248 233 aa5.09□□□□□ -1.59
DEPDC4-201ENST00000299185 CREBL2O60519 120 aaPredicted RBP5.09□□□□□ -1.59
DEPDC4-201ENST00000299185 CCNKO75909 580 aa5.09□□□□□ -1.59
DEPDC4-201ENST00000299185 DUS4LO95620 317 aaKnown RBP5.09□□□□□ -1.59
DEPDC4-201ENST00000299185 DHFRP00374 187 aa5.09□□□□□ -1.59
DEPDC4-201ENST00000299185 HRASP01112 189 aa5.09□□□□□ -1.59
DEPDC4-201ENST00000299185 HLA-DRB1P01911 266 aa5.09□□□□□ -1.59
DEPDC4-201ENST00000299185 ANXA3P12429 323 aa5.09□□□□□ -1.59
DEPDC4-201ENST00000299185 VDAC2P45880 294 aaPredicted RBP5.09□□□□□ -1.59
DEPDC4-201ENST00000299185 RPL27AP46776 148 aaKnown RBP5.09□□□□□ -1.59
DEPDC4-201ENST00000299185 HOXA1P49639 335 aaPredicted RBP5.09□□□□□ -1.59
DEPDC4-201ENST00000299185 RPL8P62917 257 aaKnown RBP5.09□□□□□ -1.59
DEPDC4-201ENST00000299185 CD300CQ08708 224 aa5.09□□□□□ -1.59
DEPDC4-201ENST00000299185 IAH1Q2TAA2 248 aaPredicted RBP5.09□□□□□ -1.59
DEPDC4-201ENST00000299185 CXorf66Q5JRM2 361 aaPredicted RBP5.09□□□□□ -1.59
DEPDC4-201ENST00000299185 ZNF329Q86UD4 541 aa5.09□□□□□ -1.59
DEPDC4-201ENST00000299185 PPP1R27Q86WC6 154 aa5.09□□□□□ -1.59
DEPDC4-201ENST00000299185 FOXRED2Q8IWF2 684 aa5.09□□□□□ -1.59
DEPDC4-201ENST00000299185 KLHDC1Q8N7A1 406 aa5.09□□□□□ -1.59
DEPDC4-201ENST00000299185 ZBTB8BQ8NAP8 495 aaPredicted RBP5.09□□□□□ -1.59
DEPDC4-201ENST00000299185 OR1S1Q8NH92 325 aa5.09□□□□□ -1.59
DEPDC4-201ENST00000299185 C19orf24Q9BVV8 132 aa5.09□□□□□ -1.59
DEPDC4-201ENST00000299185 ALX4Q9H161 411 aaPredicted RBP5.09□□□□□ -1.59
DEPDC4-201ENST00000299185 SERTAD4Q9NUC0 356 aa5.09□□□□□ -1.59
DEPDC4-201ENST00000299185 BET1LQ9NYM9 111 aa5.09□□□□□ -1.59
DEPDC4-201ENST00000299185 SHPKQ9UHJ6 478 aa5.09□□□□□ -1.59
DEPDC4-201ENST00000299185 PITPNC1Q9UKF7 332 aa5.09□□□□□ -1.59
DEPDC4-201ENST00000299185 RCL1Q9Y2P8 373 aaKnown RBP5.09□□□□□ -1.59
DEPDC4-201ENST00000299185 OR51B2Q9Y5P1 312 aa5.09□□□□□ -1.59
DEPDC4-201ENST00000299185 MMP24Q9Y5R2 645 aa5.09□□□□□ -1.59
DEPDC4-201ENST00000299185 NSD1Q96L73 2696 aaPredicted RBP5.09□□□□□ -1.6
DEPDC4-201ENST00000299185 TEX50A0A1B0GTY4 177 aa5.08□□□□□ -1.6
DEPDC4-201ENST00000299185 IGLC7A0M8Q6 106 aa5.08□□□□□ -1.6
DEPDC4-201ENST00000299185 C5orf51A6NDU8 294 aa5.08□□□□□ -1.6
DEPDC4-201ENST00000299185 MSGN1A6NI15 193 aa5.08□□□□□ -1.6
DEPDC4-201ENST00000299185 H3BP45 60 aa5.08□□□□□ -1.6
DEPDC4-201ENST00000299185 KCNAB3O43448 404 aa5.08□□□□□ -1.6
DEPDC4-201ENST00000299185 SSSCA1O60232 199 aa5.08□□□□□ -1.6
DEPDC4-201ENST00000299185 PRAF2O60831 178 aa5.08□□□□□ -1.6
DEPDC4-201ENST00000299185 CNIH1O95406 144 aa5.08□□□□□ -1.6
DEPDC4-201ENST00000299185 SULT1A3P0DMM9 295 aa5.08□□□□□ -1.6
DEPDC4-201ENST00000299185 SULT1A4P0DMN0 295 aa5.08□□□□□ -1.6
DEPDC4-201ENST00000299185 LGALS7P47929 136 aa5.08□□□□□ -1.6
DEPDC4-201ENST00000299185 COMPP49747 757 aaPredicted RBP5.08□□□□□ -1.6
DEPDC4-201ENST00000299185 MFAP2P55001 183 aa5.08□□□□□ -1.6
DEPDC4-201ENST00000299185 H2BFSP57053 126 aa5.08□□□□□ -1.6
DEPDC4-201ENST00000299185 S100A10P60903 97 aa5.08□□□□□ -1.6
DEPDC4-201ENST00000299185 POLR2GP62487 172 aaKnown RBP eCLIP5.08□□□□□ -1.6
DEPDC4-201ENST00000299185 SRPXP78539 464 aa5.08□□□□□ -1.6
DEPDC4-201ENST00000299185 WT1-ASQ06250 92 aa5.08□□□□□ -1.6
DEPDC4-201ENST00000299185 SCGB2A2Q13296 93 aa5.08□□□□□ -1.6
DEPDC4-201ENST00000299185 SMCO1Q147U7 214 aa5.08□□□□□ -1.6
DEPDC4-201ENST00000299185 KIR3DS1Q14943 382 aa5.08□□□□□ -1.6
DEPDC4-201ENST00000299185 LRRC37A5PQ49AS3 106 aa5.08□□□□□ -1.6
DEPDC4-201ENST00000299185 C19orf54Q5BKX5 351 aa5.08□□□□□ -1.6
DEPDC4-201ENST00000299185 Q5BKY6 102 aa5.08□□□□□ -1.6
DEPDC4-201ENST00000299185 THOC7Q6I9Y2 204 aaKnown RBP5.08□□□□□ -1.6
DEPDC4-201ENST00000299185 UNQ5815/PRO19632Q6UWF5 114 aa5.08□□□□□ -1.6
DEPDC4-201ENST00000299185 MMD2Q8IY49 270 aa5.08□□□□□ -1.6
DEPDC4-201ENST00000299185 TCTEX1D1Q8N7M0 179 aa5.08□□□□□ -1.6
DEPDC4-201ENST00000299185 LRTM2Q8N967 370 aa5.08□□□□□ -1.6
DEPDC4-201ENST00000299185 TEX45Q8NA69 505 aa5.08□□□□□ -1.6
DEPDC4-201ENST00000299185 LFNGQ8NES3 379 aa5.08□□□□□ -1.6
DEPDC4-201ENST00000299185 OR5T1Q8NG75 326 aa5.08□□□□□ -1.6
DEPDC4-201ENST00000299185 OR5M8Q8NGP6 311 aa5.08□□□□□ -1.6
DEPDC4-201ENST00000299185 OR4A16Q8NH70 328 aa5.08□□□□□ -1.6
DEPDC4-201ENST00000299185 CD300LFQ8TDQ1 290 aa5.08□□□□□ -1.6
DEPDC4-201ENST00000299185 CHAC2Q8WUX2 184 aa5.08□□□□□ -1.6
DEPDC4-201ENST00000299185 IL22RA2Q969J5 263 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms