RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 ACOT6Q3I5F7 207 aaPredicted RBP7.42□□□□□ -1.22
PDPN-201ENST00000294489 COMMD5Q9GZQ3 224 aa7.42□□□□□ -1.22
PDPN-201ENST00000294489 LOC102723971A0A1B0GUV8 181 aa7.41□□□□□ -1.22
PDPN-201ENST00000294489 SRP19P09132 144 aaKnown RBP7.41□□□□□ -1.22
PDPN-201ENST00000294489 BCL2P10415 239 aa7.41□□□□□ -1.22
PDPN-201ENST00000294489 USF1P22415 310 aaPredicted RBP7.41□□□□□ -1.22
PDPN-201ENST00000294489 CEBPGP53567 150 aa7.41□□□□□ -1.22
PDPN-201ENST00000294489 SRSF1Q07955 248 aaKnown RBP eCLIP7.41□□□□□ -1.22
PDPN-201ENST00000294489 RBMS3Q6XE24 437 aaKnown RBP7.41□□□□□ -1.22
PDPN-201ENST00000294489 OR4A5Q8NH83 315 aa7.41□□□□□ -1.22
PDPN-201ENST00000294489 NPVFQ9HCQ7 196 aa7.41□□□□□ -1.22
PDPN-201ENST00000294489 RPS10P5Q9NQ39 176 aa7.41□□□□□ -1.22
PDPN-201ENST00000294489 DOCK11Q5JSL3 2073 aa7.41□□□□□ -1.22
PDPN-201ENST00000294489 LRBAP50851 2863 aa7.41□□□□□ -1.22
PDPN-201ENST00000294489 IGHV2-26A0A0B4J1V2 119 aa7.41□□□□□ -1.22
PDPN-201ENST00000294489 TEX50A0A1B0GTY4 177 aa7.41□□□□□ -1.22
PDPN-201ENST00000294489 PRSS46E5RG02 174 aa7.41□□□□□ -1.22
PDPN-201ENST00000294489 CA2P00918 260 aa7.41□□□□□ -1.22
PDPN-201ENST00000294489 IGKV1D-33P01593 117 aa7.41□□□□□ -1.22
PDPN-201ENST00000294489 IGKV1-33P01594 117 aa7.41□□□□□ -1.22
PDPN-201ENST00000294489 IGLV1-47P01700 117 aa7.41□□□□□ -1.22
PDPN-201ENST00000294489 RPL8P62917 257 aaKnown RBP7.41□□□□□ -1.22
PDPN-201ENST00000294489 AWAT1Q58HT5 328 aa7.41□□□□□ -1.22
PDPN-201ENST00000294489 TREML4Q6UXN2 200 aa7.41□□□□□ -1.22
PDPN-201ENST00000294489 SSX7Q7RTT5 188 aa7.41□□□□□ -1.22
PDPN-201ENST00000294489 CLEC7AQ9BXN2 247 aa7.41□□□□□ -1.22
PDPN-201ENST00000294489 SLC25A22Q9H936 323 aa7.41□□□□□ -1.22
PDPN-201ENST00000294489 SMCO4Q9NRQ5 59 aa7.41□□□□□ -1.22
PDPN-201ENST00000294489 KCNIP2Q9NS61 270 aa7.41□□□□□ -1.22
PDPN-201ENST00000294489 ACACBO00763 2458 aa7.41□□□□□ -1.22
PDPN-201ENST00000294489 OPN1MWP04001 364 aa7.41□□□□□ -1.22
PDPN-201ENST00000294489 SNRNP70P08621 437 aaKnown RBP7.41□□□□□ -1.22
PDPN-201ENST00000294489 OPN1MW2P0DN77 364 aa7.41□□□□□ -1.22
PDPN-201ENST00000294489 OPN1MW3P0DN78 364 aa7.41□□□□□ -1.22
PDPN-201ENST00000294489 RAB31Q13636 194 aa7.41□□□□□ -1.22
PDPN-201ENST00000294489 PMS2P11Q13670 270 aa7.41□□□□□ -1.22
PDPN-201ENST00000294489 DIAPH2-AS1Q14236 149 aa7.41□□□□□ -1.22
PDPN-201ENST00000294489 BEND2Q8NDZ0 799 aa7.41□□□□□ -1.22
PDPN-201ENST00000294489 TMEM170AQ8WVE7 144 aa7.41□□□□□ -1.22
PDPN-201ENST00000294489 PUS1Q9Y606 427 aaKnown RBP eCLIP7.41□□□□□ -1.22
PDPN-201ENST00000294489 LIPFP07098 398 aa7.4□□□□□ -1.22
PDPN-201ENST00000294489 MYOD1P15172 320 aa7.4□□□□□ -1.22
PDPN-201ENST00000294489 TAGLN2P37802 199 aaKnown RBP7.4□□□□□ -1.22
PDPN-201ENST00000294489 CDKN1AP38936 164 aa7.4□□□□□ -1.22
PDPN-201ENST00000294489 OPRK1P41145 380 aa7.4□□□□□ -1.22
PDPN-201ENST00000294489 RHEBQ15382 184 aa7.4□□□□□ -1.22
PDPN-201ENST00000294489 HLA-DRB5Q30154 266 aa7.4□□□□□ -1.22
PDPN-201ENST00000294489 VMA21Q3ZAQ7 101 aa7.4□□□□□ -1.22
PDPN-201ENST00000294489 FAM122CQ6P4D5 195 aa7.4□□□□□ -1.22
PDPN-201ENST00000294489 C1orf122Q6ZSJ8 110 aa7.4□□□□□ -1.22
PDPN-201ENST00000294489 KIR3DL3Q8N743 410 aa7.4□□□□□ -1.22
PDPN-201ENST00000294489 Q8N7P7 452 aa7.4□□□□□ -1.22
PDPN-201ENST00000294489 CYB561D1Q8N8Q1 229 aa7.4□□□□□ -1.22
PDPN-201ENST00000294489 OR1L8Q8NGR8 309 aa7.4□□□□□ -1.22
PDPN-201ENST00000294489 P2RX4Q99571 388 aa7.4□□□□□ -1.22
PDPN-201ENST00000294489 VAX2Q9UIW0 290 aa7.4□□□□□ -1.22
PDPN-201ENST00000294489 TPRP12270 2363 aaKnown RBP7.4□□□□□ -1.22
PDPN-201ENST00000294489 C7orf77A4D0Y5 90 aa7.4□□□□□ -1.23
PDPN-201ENST00000294489 C22orf46C9J442 243 aa7.4□□□□□ -1.23
PDPN-201ENST00000294489 M0R1W7 72 aa7.4□□□□□ -1.23
PDPN-201ENST00000294489 PAX1P15863 534 aa7.4□□□□□ -1.23
PDPN-201ENST00000294489 TMEM11P17152 192 aa7.4□□□□□ -1.23
PDPN-201ENST00000294489 LGALS7P47929 136 aa7.4□□□□□ -1.23
PDPN-201ENST00000294489 ERHP84090 104 aaKnown RBP7.4□□□□□ -1.23
PDPN-201ENST00000294489 PAX2Q02962 417 aa7.4□□□□□ -1.23
PDPN-201ENST00000294489 TEPPQ6URK8 271 aa7.4□□□□□ -1.23
PDPN-201ENST00000294489 TMEM167AQ8TBQ9 72 aa7.4□□□□□ -1.23
PDPN-201ENST00000294489 RAB24Q969Q5 203 aa7.4□□□□□ -1.23
PDPN-201ENST00000294489 AMMECR1Q9Y4X0 333 aaPredicted RBP7.4□□□□□ -1.23
PDPN-201ENST00000294489 TET2Q6N021 2002 aaPredicted RBP7.4□□□□□ -1.23
PDPN-201ENST00000294489 ABCA4P78363 2273 aa7.39□□□□□ -1.23
PDPN-201ENST00000294489 A0A1W2PN81 502 aa7.39□□□□□ -1.23
PDPN-201ENST00000294489 FNDC10F2Z333 226 aa7.39□□□□□ -1.23
PDPN-201ENST00000294489 LY6LH3BQJ8 138 aa7.39□□□□□ -1.23
PDPN-201ENST00000294489 ENSAO43768 121 aaKnown RBP7.39□□□□□ -1.23
PDPN-201ENST00000294489 CHRNA7P36544 502 aa7.39□□□□□ -1.23
PDPN-201ENST00000294489 CDC34P49427 236 aaPredicted RBP7.39□□□□□ -1.23
PDPN-201ENST00000294489 NIPSNAP3BQ9BS92 247 aa7.39□□□□□ -1.23
PDPN-201ENST00000294489 C20orf24Q9BUV8 137 aa7.39□□□□□ -1.23
PDPN-201ENST00000294489 ONECUT1Q9UBC0 465 aa7.39□□□□□ -1.23
PDPN-201ENST00000294489 A0A1W2PPV4 95 aa7.39□□□□□ -1.23
PDPN-201ENST00000294489 IGHV2-5P01817 119 aa7.39□□□□□ -1.23
PDPN-201ENST00000294489 FBP1P09467 338 aa7.39□□□□□ -1.23
PDPN-201ENST00000294489 PSMB3P49720 205 aa7.39□□□□□ -1.23
PDPN-201ENST00000294489 C2orf83Q53S99 150 aa7.39□□□□□ -1.23
PDPN-201ENST00000294489 SSBP3Q9BWW4 388 aaPredicted RBP7.39□□□□□ -1.23
PDPN-201ENST00000294489 NDUFA4L2Q9NRX3 87 aa7.39□□□□□ -1.23
PDPN-201ENST00000294489 INSIG2Q9Y5U4 225 aa7.39□□□□□ -1.23
PDPN-201ENST00000294489 UBR5O95071 2799 aaPredicted RBP7.39□□□□□ -1.23
PDPN-201ENST00000294489 H3BQ15 152 aa7.38□□□□□ -1.23
PDPN-201ENST00000294489 BUB1B-PAK6H3BSN5 160 aa7.38□□□□□ -1.23
PDPN-201ENST00000294489 HMGB3O15347 200 aaKnown RBP7.38□□□□□ -1.23
PDPN-201ENST00000294489 NDUFS7O75251 213 aa7.38□□□□□ -1.23
PDPN-201ENST00000294489 GPR6P46095 362 aaPredicted RBP7.38□□□□□ -1.23
PDPN-201ENST00000294489 RELQ04864 619 aaPredicted RBP7.38□□□□□ -1.23
PDPN-201ENST00000294489 ARSJQ5FYB0 599 aaPredicted RBP7.38□□□□□ -1.23
PDPN-201ENST00000294489 OR11H6Q8NGC7 330 aa7.38□□□□□ -1.23
PDPN-201ENST00000294489 MGST2Q99735 147 aa7.38□□□□□ -1.23
PDPN-201ENST00000294489 GGTLC1Q9BX51 225 aa7.38□□□□□ -1.23
PDPN-201ENST00000294489 MANBALQ9NQG1 85 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms