RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 TGFBR3Q03167 851 aa8.54□□□□□ -1.04
UPF3B-201ENST00000276201 FBXW9Q5XUX1 488 aa8.54□□□□□ -1.04
UPF3B-201ENST00000276201 SLC35E4Q6ICL7 350 aa8.54□□□□□ -1.04
UPF3B-201ENST00000276201 ZNF474Q6S9Z5 364 aaPredicted RBP8.54□□□□□ -1.04
UPF3B-201ENST00000276201 PRR18Q8N4B5 295 aa8.54□□□□□ -1.04
UPF3B-201ENST00000276201 Q8N976 141 aa8.54□□□□□ -1.04
UPF3B-201ENST00000276201 ZNF114Q8NC26 417 aa8.54□□□□□ -1.04
UPF3B-201ENST00000276201 HSPB9Q9BQS6 159 aa8.54□□□□□ -1.04
UPF3B-201ENST00000276201 MRPL18Q9H0U6 180 aaKnown RBP8.54□□□□□ -1.04
UPF3B-201ENST00000276201 ITPR2Q14571 2701 aa8.53□□□□□ -1.04
UPF3B-201ENST00000276201 A0A1W2PPV4 95 aa8.53□□□□□ -1.04
UPF3B-201ENST00000276201 SH2D1BO14796 132 aa8.53□□□□□ -1.04
UPF3B-201ENST00000276201 SERF1AO75920 110 aa8.53□□□□□ -1.04
UPF3B-201ENST00000276201 RAC2P15153 192 aa8.53□□□□□ -1.04
UPF3B-201ENST00000276201 WNT5AP41221 380 aa8.53□□□□□ -1.04
UPF3B-201ENST00000276201 CST9LP1Q5W188 147 aa8.53□□□□□ -1.04
UPF3B-201ENST00000276201 TUSC5Q8IXB3 177 aa8.53□□□□□ -1.04
UPF3B-201ENST00000276201 C1orf174Q8IYL3 243 aa8.53□□□□□ -1.04
UPF3B-201ENST00000276201 ORAOV1Q8WV07 137 aa8.53□□□□□ -1.04
UPF3B-201ENST00000276201 ZNF488Q96MN9 340 aa8.53□□□□□ -1.04
UPF3B-201ENST00000276201 GP6Q9HCN6 339 aa8.53□□□□□ -1.04
UPF3B-201ENST00000276201 PROCRQ9UNN8 238 aa8.53□□□□□ -1.04
UPF3B-201ENST00000276201 ABCA12Q86UK0 2595 aa8.53□□□□□ -1.04
UPF3B-201ENST00000276201 TRBV20OR9-2A0A075B6H5 130 aa8.53□□□□□ -1.04
UPF3B-201ENST00000276201 TMEM30CPA0ZSE6 113 aa8.53□□□□□ -1.04
UPF3B-201ENST00000276201 G6PCP35575 357 aa8.53□□□□□ -1.04
UPF3B-201ENST00000276201 BRWD1-AS2P59051 145 aa8.53□□□□□ -1.04
UPF3B-201ENST00000276201 RPL30P62888 115 aaKnown RBP8.53□□□□□ -1.04
UPF3B-201ENST00000276201 ZNF90Q03938 601 aa8.53□□□□□ -1.04
UPF3B-201ENST00000276201 PLP2Q04941 152 aa8.53□□□□□ -1.04
UPF3B-201ENST00000276201 GABRA6Q16445 453 aa8.53□□□□□ -1.04
UPF3B-201ENST00000276201 H2BFWTQ7Z2G1 175 aa8.53□□□□□ -1.04
UPF3B-201ENST00000276201 ARL6IP6Q8N6S5 226 aa8.53□□□□□ -1.04
UPF3B-201ENST00000276201 OCC1Q8TAD7 63 aa8.53□□□□□ -1.04
UPF3B-201ENST00000276201 C5orf30Q96GV9 206 aa8.53□□□□□ -1.04
UPF3B-201ENST00000276201 WFIKKN1Q96NZ8 548 aa8.53□□□□□ -1.04
UPF3B-201ENST00000276201 HSD17B10Q99714 261 aaKnown RBP8.53□□□□□ -1.04
UPF3B-201ENST00000276201 HES4Q9HCC6 221 aa8.53□□□□□ -1.04
UPF3B-201ENST00000276201 PLSCR4Q9NRQ2 329 aa8.53□□□□□ -1.04
UPF3B-201ENST00000276201 ZNF586Q9NXT0 402 aa8.53□□□□□ -1.04
UPF3B-201ENST00000276201 FBN2P35556 2912 aa8.52□□□□□ -1.05
UPF3B-201ENST00000276201 NOTCH2Q04721 2471 aa8.52□□□□□ -1.05
UPF3B-201ENST00000276201 DOCK11Q5JSL3 2073 aa8.52□□□□□ -1.05
UPF3B-201ENST00000276201 A0A1B0GUS0 222 aa8.52□□□□□ -1.05
UPF3B-201ENST00000276201 OOEPA6NGQ2 149 aa8.52□□□□□ -1.05
UPF3B-201ENST00000276201 PRSS46E5RG02 174 aa8.52□□□□□ -1.05
UPF3B-201ENST00000276201 FNDC10F2Z333 226 aa8.52□□□□□ -1.05
UPF3B-201ENST00000276201 IFNL4K9M1U5 179 aa8.52□□□□□ -1.05
UPF3B-201ENST00000276201 S1PR2O95136 353 aa8.52□□□□□ -1.05
UPF3B-201ENST00000276201 MT-CO2P00403 227 aa8.52□□□□□ -1.05
UPF3B-201ENST00000276201 GPX1P07203 203 aa8.52□□□□□ -1.05
UPF3B-201ENST00000276201 C12orf49Q9H741 205 aa8.52□□□□□ -1.05
UPF3B-201ENST00000276201 UQCR10Q9UDW1 63 aa8.52□□□□□ -1.05
UPF3B-201ENST00000276201 DCHS2Q6V1P9 2916 aa8.52□□□□□ -1.05
UPF3B-201ENST00000276201 RAMP3O60896 148 aa8.51□□□□□ -1.05
UPF3B-201ENST00000276201 NGFP01138 241 aa8.51□□□□□ -1.05
UPF3B-201ENST00000276201 CRYAAP02489 173 aa8.51□□□□□ -1.05
UPF3B-201ENST00000276201 FAM27E3Q08E93 113 aa8.51□□□□□ -1.05
UPF3B-201ENST00000276201 RPEL1Q2QD12 228 aa8.51□□□□□ -1.05
UPF3B-201ENST00000276201 SPATA46Q5T0L3 261 aa8.51□□□□□ -1.05
UPF3B-201ENST00000276201 TCF23Q7RTU1 214 aa8.51□□□□□ -1.05
UPF3B-201ENST00000276201 OR1L6Q8NGR2 347 aa8.51□□□□□ -1.05
UPF3B-201ENST00000276201 GALMQ96C23 342 aa8.51□□□□□ -1.05
UPF3B-201ENST00000276201 DERL1Q9BUN8 251 aa8.51□□□□□ -1.05
UPF3B-201ENST00000276201 CACNA1DQ01668 2161 aa8.51□□□□□ -1.05
UPF3B-201ENST00000276201 C20orf202A1L168 122 aa8.51□□□□□ -1.05
UPF3B-201ENST00000276201 C17orf98A8MV24 154 aa8.51□□□□□ -1.05
UPF3B-201ENST00000276201 RHBDL1O75783 438 aa8.51□□□□□ -1.05
UPF3B-201ENST00000276201 OR5G3P0C626 314 aa8.51□□□□□ -1.05
UPF3B-201ENST00000276201 SELEP16581 610 aa8.51□□□□□ -1.05
UPF3B-201ENST00000276201 RAB7AP51149 207 aa8.51□□□□□ -1.05
UPF3B-201ENST00000276201 TRAT1Q6PIZ9 186 aa8.51□□□□□ -1.05
UPF3B-201ENST00000276201 C19orf35Q6ZS72 473 aa8.51□□□□□ -1.05
UPF3B-201ENST00000276201 SIGLECL1Q8N7X8 197 aa8.51□□□□□ -1.05
UPF3B-201ENST00000276201 SLC35E1Q96K37 410 aa8.51□□□□□ -1.05
UPF3B-201ENST00000276201 UHRF2Q96PU4 802 aa8.51□□□□□ -1.05
UPF3B-201ENST00000276201 OR2D2Q9H210 308 aa8.51□□□□□ -1.05
UPF3B-201ENST00000276201 SLC25A10Q9UBX3 287 aaPredicted RBP8.51□□□□□ -1.05
UPF3B-201ENST00000276201 MAST4O15021 2626 aa8.51□□□□□ -1.05
UPF3B-201ENST00000276201 APCP25054 2843 aa8.5□□□□□ -1.05
UPF3B-201ENST00000276201 ZNF503-AS2A6NEH8 195 aa8.5□□□□□ -1.05
UPF3B-201ENST00000276201 A6NNC1 897 aa8.5□□□□□ -1.05
UPF3B-201ENST00000276201 ARL14EPLP0DKL9 152 aa8.5□□□□□ -1.05
UPF3B-201ENST00000276201 CDKN1AP38936 164 aa8.5□□□□□ -1.05
UPF3B-201ENST00000276201 SCCPDHQ8NBX0 429 aa8.5□□□□□ -1.05
UPF3B-201ENST00000276201 OR5T1Q8NG75 326 aa8.5□□□□□ -1.05
UPF3B-201ENST00000276201 LINC01560Q8TB33 94 aa8.5□□□□□ -1.05
UPF3B-201ENST00000276201 GGTLC1Q9BX51 225 aa8.5□□□□□ -1.05
UPF3B-201ENST00000276201 PATZ1Q9HBE1 687 aaKnown RBP8.5□□□□□ -1.05
UPF3B-201ENST00000276201 OSTCQ9NRP0 149 aa8.5□□□□□ -1.05
UPF3B-201ENST00000276201 FBXL7Q9UJT9 491 aa8.5□□□□□ -1.05
UPF3B-201ENST00000276201 LSM4Q9Y4Z0 139 aaKnown RBP8.5□□□□□ -1.05
UPF3B-201ENST00000276201 FREM1Q5H8C1 2179 aa8.5□□□□□ -1.05
UPF3B-201ENST00000276201 NAV2Q8IVL1 2488 aa8.5□□□□□ -1.05
UPF3B-201ENST00000276201 SCO2A0A1W2PP80 73 aa8.5□□□□□ -1.05
UPF3B-201ENST00000276201 GRIFINA4D1Z8 144 aa8.5□□□□□ -1.05
UPF3B-201ENST00000276201 SIRPB1O00241 398 aa8.5□□□□□ -1.05
UPF3B-201ENST00000276201 ZNF253O75346 499 aa8.5□□□□□ -1.05
UPF3B-201ENST00000276201 TOMM40O96008 361 aa8.5□□□□□ -1.05
UPF3B-201ENST00000276201 CBLN1P23435 193 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms