RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 IGHV3OR16-8A0A075B7F1 116 aa6.61□□□□□ -1.35
TPM3-201ENST00000271850 TRBV7-1A0A0A6YYK4 115 aa6.61□□□□□ -1.35
TPM3-201ENST00000271850 SULT1C2O00338 296 aa6.61□□□□□ -1.35
TPM3-201ENST00000271850 SLC22A5O76082 557 aa6.61□□□□□ -1.35
TPM3-201ENST00000271850 LY6G6CO95867 125 aa6.61□□□□□ -1.35
TPM3-201ENST00000271850 PPYP01298 95 aa6.61□□□□□ -1.35
TPM3-201ENST00000271850 RPA2P15927 270 aa6.61□□□□□ -1.35
TPM3-201ENST00000271850 FCGR2CP31995 323 aa6.61□□□□□ -1.35
TPM3-201ENST00000271850 GNG2P59768 71 aa6.61□□□□□ -1.35
TPM3-201ENST00000271850 TNFRSF9Q07011 255 aa6.61□□□□□ -1.35
TPM3-201ENST00000271850 MSMO1Q15800 293 aa6.61□□□□□ -1.35
TPM3-201ENST00000271850 DEFB135Q30KP9 77 aa6.61□□□□□ -1.35
TPM3-201ENST00000271850 FAM106AQ4KMX7 169 aa6.61□□□□□ -1.35
TPM3-201ENST00000271850 SLC16A13Q7RTY0 426 aa6.61□□□□□ -1.35
TPM3-201ENST00000271850 LYG2Q86SG7 212 aa6.61□□□□□ -1.35
TPM3-201ENST00000271850 HOGA1Q86XE5 327 aa6.61□□□□□ -1.35
TPM3-201ENST00000271850 SPAG16Q8N0X2 631 aa6.61□□□□□ -1.35
TPM3-201ENST00000271850 SPARTQ8N0X7 666 aa6.61□□□□□ -1.35
TPM3-201ENST00000271850 BEST4Q8NFU0 473 aa6.61□□□□□ -1.35
TPM3-201ENST00000271850 SECTM1Q8WVN6 248 aa6.61□□□□□ -1.35
TPM3-201ENST00000271850 CHRDL1Q9BU40 450 aa6.61□□□□□ -1.35
TPM3-201ENST00000271850 CENPOQ9BU64 300 aa6.61□□□□□ -1.35
TPM3-201ENST00000271850 TMEM140Q9NV12 185 aa6.61□□□□□ -1.35
TPM3-201ENST00000271850 RHBDL2Q9NX52 303 aa6.61□□□□□ -1.35
TPM3-201ENST00000271850 DNAH17Q9UFH2 4485 aa6.61□□□□□ -1.35
TPM3-201ENST00000271850 IGHV3-21A0A0B4J1V1 117 aa6.6□□□□□ -1.35
TPM3-201ENST00000271850 TRAV25A0A0B4J276 109 aa6.6□□□□□ -1.35
TPM3-201ENST00000271850 DPPA5A6NC42 116 aa6.6□□□□□ -1.35
TPM3-201ENST00000271850 OR2T8A6NH00 312 aa6.6□□□□□ -1.35
TPM3-201ENST00000271850 K7EIM0 57 aa6.6□□□□□ -1.35
TPM3-201ENST00000271850 TSPAN4O14817 238 aa6.6□□□□□ -1.35
TPM3-201ENST00000271850 RBFOX2O43251 390 aaKnown RBP eCLIP6.6□□□□□ -1.35
TPM3-201ENST00000271850 TGOLN2O43493 480 aa6.6□□□□□ -1.35
TPM3-201ENST00000271850 DEDDO75618 318 aa6.6□□□□□ -1.35
TPM3-201ENST00000271850 HIST1H1BP16401 226 aaKnown RBP6.6□□□□□ -1.35
TPM3-201ENST00000271850 PTBP1P26599 531 aaKnown RBP eCLIP6.6□□□□□ -1.352e-9■■■■■ 36.6
TPM3-201ENST00000271850 FCGR2BP31994 310 aaPredicted RBP6.6□□□□□ -1.35
TPM3-201ENST00000271850 SDC2P34741 201 aa6.6□□□□□ -1.35
TPM3-201ENST00000271850 TGFBR1P36897 503 aa6.6□□□□□ -1.35
TPM3-201ENST00000271850 TAS2R31P59538 309 aa6.6□□□□□ -1.35
TPM3-201ENST00000271850 ARL6IP1Q15041 203 aa6.6□□□□□ -1.35
TPM3-201ENST00000271850 CEMP1Q6PRD7 247 aaPredicted RBP6.6□□□□□ -1.35
TPM3-201ENST00000271850 OR1L6Q8NGR2 347 aa6.6□□□□□ -1.35
TPM3-201ENST00000271850 OR4A5Q8NH83 315 aa6.6□□□□□ -1.35
TPM3-201ENST00000271850 C5orf66Q9H5L9 145 aa6.6□□□□□ -1.35
TPM3-201ENST00000271850 MRPL27Q9P0M9 148 aaKnown RBP6.6□□□□□ -1.35
TPM3-201ENST00000271850 RRP15Q9Y3B9 282 aaKnown RBP6.6□□□□□ -1.35
TPM3-201ENST00000271850 TRAV18A0A075B6X5 111 aa6.59□□□□□ -1.35
TPM3-201ENST00000271850 TEX50A0A1B0GTY4 177 aa6.59□□□□□ -1.35
TPM3-201ENST00000271850 MEIS3P1A6NDR6 274 aa6.59□□□□□ -1.35
TPM3-201ENST00000271850 CXorf65A6NEN9 183 aa6.59□□□□□ -1.35
TPM3-201ENST00000271850 SPRY2O43597 315 aa6.59□□□□□ -1.35
TPM3-201ENST00000271850 ZNF207O43670 478 aaKnown RBP6.59□□□□□ -1.35
TPM3-201ENST00000271850 HPRT1P00492 218 aa6.59□□□□□ -1.35
TPM3-201ENST00000271850 HRASP01112 189 aa6.59□□□□□ -1.35
TPM3-201ENST00000271850 PSMB9P28065 219 aa6.59□□□□□ -1.35
TPM3-201ENST00000271850 GNRHRP30968 328 aa6.59□□□□□ -1.35
TPM3-201ENST00000271850 RANBP1P43487 201 aa6.59□□□□□ -1.35
TPM3-201ENST00000271850 ELLP55199 621 aaPredicted RBP6.59□□□□□ -1.35
TPM3-201ENST00000271850 FXYD4P59646 89 aa6.59□□□□□ -1.35
TPM3-201ENST00000271850 GABARAPL2P60520 117 aa6.59□□□□□ -1.35
TPM3-201ENST00000271850 MXD1Q05195 221 aa6.59□□□□□ -1.35
TPM3-201ENST00000271850 Q6ZWC4 215 aa6.59□□□□□ -1.35
TPM3-201ENST00000271850 OR2C3Q8N628 320 aa6.59□□□□□ -1.35
TPM3-201ENST00000271850 GDPD1Q8N9F7 314 aa6.59□□□□□ -1.35
TPM3-201ENST00000271850 OR51H1Q8NH63 302 aa6.59□□□□□ -1.35
TPM3-201ENST00000271850 MARC2Q969Z3 335 aa6.59□□□□□ -1.35
TPM3-201ENST00000271850 RNF183Q96D59 192 aa6.59□□□□□ -1.35
TPM3-201ENST00000271850 CXorf58Q96LI9 332 aa6.59□□□□□ -1.35
TPM3-201ENST00000271850 SPAG8Q99932 426 aaPredicted RBP6.59□□□□□ -1.35
TPM3-201ENST00000271850 AUNIPQ9H7T9 357 aa6.59□□□□□ -1.35
TPM3-201ENST00000271850 HRASLSQ9HDD0 168 aa6.59□□□□□ -1.35
TPM3-201ENST00000271850 NDUFA4L2Q9NRX3 87 aa6.59□□□□□ -1.35
TPM3-201ENST00000271850 ANAPC10Q9UM13 185 aa6.59□□□□□ -1.35
TPM3-201ENST00000271850 TP53TG1Q9Y2A0 90 aa6.59□□□□□ -1.35
TPM3-201ENST00000271850 NSG2Q9Y328 171 aa6.59□□□□□ -1.35
TPM3-201ENST00000271850 PKHD1P08F94 4074 aa6.59□□□□□ -1.36
TPM3-201ENST00000271850 SERPINE2P07093 398 aa6.58□□□□□ -1.36
TPM3-201ENST00000271850 FGF2P09038 288 aa6.58□□□□□ -1.36
TPM3-201ENST00000271850 DEFA4P12838 97 aa6.58□□□□□ -1.36
TPM3-201ENST00000271850 NQO2P16083 231 aa6.58□□□□□ -1.36
TPM3-201ENST00000271850 RPL35AP18077 110 aaKnown RBP6.58□□□□□ -1.36
TPM3-201ENST00000271850 BMI1P35226 326 aa6.58□□□□□ -1.36
TPM3-201ENST00000271850 PLET1Q6UQ28 207 aa6.58□□□□□ -1.36
TPM3-201ENST00000271850 TPRA1Q86W33 373 aa6.58□□□□□ -1.36
TPM3-201ENST00000271850 TMEM17Q86X19 198 aa6.58□□□□□ -1.36
TPM3-201ENST00000271850 APRG1Q8IVJ8 170 aa6.58□□□□□ -1.36
TPM3-201ENST00000271850 ZBTB34Q8NCN2 500 aa6.58□□□□□ -1.36
TPM3-201ENST00000271850 VN1R17PQ8TDU5 208 aa6.58□□□□□ -1.36
TPM3-201ENST00000271850 SCARB1Q8WTV0 552 aa6.58□□□□□ -1.36
TPM3-201ENST00000271850 GIMAP1Q8WWP7 306 aa6.58□□□□□ -1.36
TPM3-201ENST00000271850 SRSF8Q9BRL6 282 aaKnown RBP6.58□□□□□ -1.36
TPM3-201ENST00000271850 QTRT1Q9BXR0 403 aaKnown RBP6.58□□□□□ -1.36
TPM3-201ENST00000271850 SLC5A7Q9GZV3 580 aa6.58□□□□□ -1.36
TPM3-201ENST00000271850 FXYD6Q9H0Q3 95 aa6.58□□□□□ -1.36
TPM3-201ENST00000271850 UFC1Q9Y3C8 167 aa6.58□□□□□ -1.36
TPM3-201ENST00000271850 F11RQ9Y624 299 aaKnown RBP6.58□□□□□ -1.36
TPM3-201ENST00000271850 PCLOQ9Y6V0 5065 aa6.58□□□□□ -1.36
TPM3-201ENST00000271850 NUPR2A6NF83 97 aa6.57□□□□□ -1.36
TPM3-201ENST00000271850 MARCH11A6NNE9 402 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms