RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 PJVKQ0ZLH3 352 aa13.12□□□□□ -0.31
TPM1-201ENST00000267996 EBI3Q14213 229 aa13.12□□□□□ -0.31
TPM1-201ENST00000267996 ETV3LQ6ZN32 361 aa13.12□□□□□ -0.31
TPM1-201ENST00000267996 OR2G3Q8NGZ4 309 aa13.12□□□□□ -0.31
TPM1-201ENST00000267996 SCGB1C1Q8TD33 95 aa13.12□□□□□ -0.31
TPM1-201ENST00000267996 C17orf50Q8WW18 174 aa13.12□□□□□ -0.31
TPM1-201ENST00000267996 UQCC1Q9NVA1 299 aa13.12□□□□□ -0.31
TPM1-201ENST00000267996 PFDN2Q9UHV9 154 aa13.12□□□□□ -0.31
TPM1-201ENST00000267996 RFNGQ9Y644 331 aa13.12□□□□□ -0.31
TPM1-201ENST00000267996 CENPVL3A0A0U1RRI6 287 aa13.11□□□□□ -0.31
TPM1-201ENST00000267996 A0A1B0GW64 132 aa13.11□□□□□ -0.31
TPM1-201ENST00000267996 A0A1W2PN81 502 aa13.11□□□□□ -0.31
TPM1-201ENST00000267996 MFSD2BA6NFX1 497 aa13.11□□□□□ -0.31
TPM1-201ENST00000267996 UMAD1C9J7I0 102 aa13.11□□□□□ -0.31
TPM1-201ENST00000267996 MOSP00540 346 aa13.11□□□□□ -0.31
TPM1-201ENST00000267996 CA2P00918 260 aa13.11□□□□□ -0.31
TPM1-201ENST00000267996 CHRNA7P36544 502 aa13.11□□□□□ -0.31
TPM1-201ENST00000267996 F2RL1P55085 397 aa13.11□□□□□ -0.31
TPM1-201ENST00000267996 BLOC1S1P78537 153 aa13.11□□□□□ -0.31
TPM1-201ENST00000267996 CENPVQ7Z7K6 275 aaPredicted RBP13.11□□□□□ -0.31
TPM1-201ENST00000267996 NPBQ8NG41 125 aa13.11□□□□□ -0.31
TPM1-201ENST00000267996 TAF15Q92804 592 aaKnown RBP eCLIP13.11□□□□□ -0.31
TPM1-201ENST00000267996 EAF1Q96JC9 268 aaPredicted RBP13.11□□□□□ -0.31
TPM1-201ENST00000267996 CITED4Q96RK1 184 aa13.11□□□□□ -0.31
TPM1-201ENST00000267996 PSMG3Q9BT73 122 aaPredicted RBP13.11□□□□□ -0.31
TPM1-201ENST00000267996 PARP11Q9NR21 331 aa13.11□□□□□ -0.31
TPM1-201ENST00000267996 ABCA12Q86UK0 2595 aa13.1□□□□□ -0.31
TPM1-201ENST00000267996 B4DSR2 109 aa13.1□□□□□ -0.31
TPM1-201ENST00000267996 TRIM77I1YAP6 450 aa13.1□□□□□ -0.31
TPM1-201ENST00000267996 NPFFO15130 113 aa13.1□□□□□ -0.31
TPM1-201ENST00000267996 IGKV1D-33P01593 117 aa13.1□□□□□ -0.31
TPM1-201ENST00000267996 IGKV1-33P01594 117 aa13.1□□□□□ -0.31
TPM1-201ENST00000267996 C2orf83Q53S99 150 aa13.1□□□□□ -0.31
TPM1-201ENST00000267996 C10orf55Q5SWW7 151 aa13.1□□□□□ -0.31
TPM1-201ENST00000267996 SLC25A24Q6NUK1 477 aa13.1□□□□□ -0.31
TPM1-201ENST00000267996 PPP1R27Q86WC6 154 aa13.1□□□□□ -0.31
TPM1-201ENST00000267996 EIF4E3Q8N5X7 224 aaKnown RBP13.1□□□□□ -0.31
TPM1-201ENST00000267996 Q8N6K4 173 aa13.1□□□□□ -0.31
TPM1-201ENST00000267996 OR10W1Q8NGF6 305 aa13.1□□□□□ -0.31
TPM1-201ENST00000267996 MBD6Q96DN6 1003 aa13.1□□□□□ -0.31
TPM1-201ENST00000267996 METTL1Q9UBP6 276 aaKnown RBP13.1□□□□□ -0.31
TPM1-201ENST00000267996 NAV2Q8IVL1 2488 aa13.1□□□□□ -0.31
TPM1-201ENST00000267996 PLXNB1O43157 2135 aa13.09□□□□□ -0.31
TPM1-201ENST00000267996 UBE2L5PA0A1B0GUS4 154 aa13.09□□□□□ -0.31
TPM1-201ENST00000267996 NDUFA3O95167 84 aa13.09□□□□□ -0.31
TPM1-201ENST00000267996 RNASE2P10153 161 aaKnown RBP13.09□□□□□ -0.31
TPM1-201ENST00000267996 PAX6P26367 422 aa13.09□□□□□ -0.31
TPM1-201ENST00000267996 SAA4P35542 130 aa13.09□□□□□ -0.31
TPM1-201ENST00000267996 DLK1P80370 383 aa13.09□□□□□ -0.31
TPM1-201ENST00000267996 PXDC1Q5TGL8 231 aa13.09□□□□□ -0.31
TPM1-201ENST00000267996 TMEM182Q6ZP80 229 aaPredicted RBP13.09□□□□□ -0.31
TPM1-201ENST00000267996 HSD17B13Q7Z5P4 300 aaPredicted RBP13.09□□□□□ -0.31
TPM1-201ENST00000267996 PIP4P2Q8N4L2 257 aa13.09□□□□□ -0.31
TPM1-201ENST00000267996 OR2T10Q8NGZ9 312 aa13.09□□□□□ -0.31
TPM1-201ENST00000267996 LYPD6BQ8NI32 183 aa13.09□□□□□ -0.31
TPM1-201ENST00000267996 FBXL15Q9H469 300 aa13.09□□□□□ -0.31
TPM1-201ENST00000267996 TIMM9Q9Y5J7 89 aa13.09□□□□□ -0.31
TPM1-201ENST00000267996 IFNA4P05014 189 aa13.08□□□□□ -0.31
TPM1-201ENST00000267996 SNRNP70P08621 437 aaKnown RBP13.08□□□□□ -0.31
TPM1-201ENST00000267996 COMPP49747 757 aaPredicted RBP13.08□□□□□ -0.31
TPM1-201ENST00000267996 ERHP84090 104 aaKnown RBP13.08□□□□□ -0.31
TPM1-201ENST00000267996 BTNL8Q6UX41 500 aa13.08□□□□□ -0.31
TPM1-201ENST00000267996 RSG1Q9BU20 258 aa13.08□□□□□ -0.31
TPM1-201ENST00000267996 WDR83OSQ9Y284 106 aa13.08□□□□□ -0.31
TPM1-201ENST00000267996 TRAV20A0A0B4J274 112 aa13.08□□□□□ -0.32
TPM1-201ENST00000267996 ANKRD34BA5PLL1 514 aa13.08□□□□□ -0.32
TPM1-201ENST00000267996 FNDC10F2Z333 226 aa13.08□□□□□ -0.32
TPM1-201ENST00000267996 NBR2O15453 112 aa13.08□□□□□ -0.32
TPM1-201ENST00000267996 SSBP2P81877 361 aaPredicted RBP13.08□□□□□ -0.32
TPM1-201ENST00000267996 WT1-ASQ06250 92 aa13.08□□□□□ -0.32
TPM1-201ENST00000267996 LOXL1Q08397 574 aaPredicted RBP13.08□□□□□ -0.32
TPM1-201ENST00000267996 AANATQ16613 207 aa13.08□□□□□ -0.32
TPM1-201ENST00000267996 FBLN7Q53RD9 439 aa13.08□□□□□ -0.32
TPM1-201ENST00000267996 Q6ZRG5 221 aa13.08□□□□□ -0.32
TPM1-201ENST00000267996 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.07□□□□□ -0.325e-6■■■□□ 16.3
TPM1-201ENST00000267996 VPS13CQ709C8 3753 aa13.07□□□□□ -0.32
TPM1-201ENST00000267996 IGHV1-69DA0A0B4J2H0 117 aa13.07□□□□□ -0.32
TPM1-201ENST00000267996 NUDT19A8MXV4 375 aa13.07□□□□□ -0.32
TPM1-201ENST00000267996 TEX46H3BTG2 121 aa13.07□□□□□ -0.32
TPM1-201ENST00000267996 IGHV1-69P01742 117 aa13.07□□□□□ -0.32
TPM1-201ENST00000267996 GATA3P23771 443 aa13.07□□□□□ -0.32
TPM1-201ENST00000267996 RPL27AP46776 148 aaKnown RBP13.07□□□□□ -0.32
TPM1-201ENST00000267996 SERF2P84101 59 aa13.07□□□□□ -0.32
TPM1-201ENST00000267996 MMDQ15546 238 aa13.07□□□□□ -0.32
TPM1-201ENST00000267996 TUSC1Q2TAM9 212 aa13.07□□□□□ -0.32
TPM1-201ENST00000267996 MARC2Q969Z3 335 aa13.07□□□□□ -0.32
TPM1-201ENST00000267996 IGLC7A0M8Q6 106 aa13.06□□□□□ -0.32
TPM1-201ENST00000267996 FCN1O00602 326 aa13.06□□□□□ -0.32
TPM1-201ENST00000267996 ACTL6BO94805 426 aa13.06□□□□□ -0.32
TPM1-201ENST00000267996 FGF7P21781 194 aa13.06□□□□□ -0.32
TPM1-201ENST00000267996 CD24P25063 80 aa13.06□□□□□ -0.32
TPM1-201ENST00000267996 SNCAP37840 140 aa13.06□□□□□ -0.32
TPM1-201ENST00000267996 CAMLGP49069 296 aa13.06□□□□□ -0.32
TPM1-201ENST00000267996 FHITP49789 147 aa13.06□□□□□ -0.32
TPM1-201ENST00000267996 HNF4GQ14541 408 aa13.06□□□□□ -0.32
TPM1-201ENST00000267996 DPPA3Q6W0C5 159 aa13.06□□□□□ -0.32
TPM1-201ENST00000267996 FBXO7Q9Y3I1 522 aa13.06□□□□□ -0.32
TPM1-201ENST00000267996 APCP25054 2843 aa13.05□□□□□ -0.32
TPM1-201ENST00000267996 RAB19A4D1S5 217 aa13.05□□□□□ -0.32
TPM1-201ENST00000267996 PRH1P02810 166 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms