RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 OR5T1Q8NG75 326 aa10.57□□□□□ -0.72
CPSF6-201ENST00000266679 NIT2Q9NQR4 276 aa10.57□□□□□ -0.72
CPSF6-201ENST00000266679 TMEM14BQ9NUH8 114 aa10.57□□□□□ -0.72
CPSF6-201ENST00000266679 OR51B2Q9Y5P1 312 aa10.57□□□□□ -0.72
CPSF6-201ENST00000266679 CA2P00918 260 aa10.56□□□□□ -0.72
CPSF6-201ENST00000266679 NPPCP23582 126 aa10.56□□□□□ -0.72
CPSF6-201ENST00000266679 BSPH1Q075Z2 132 aa10.56□□□□□ -0.72
CPSF6-201ENST00000266679 OR13D1Q8NGV5 346 aa10.56□□□□□ -0.72
CPSF6-201ENST00000266679 FRZBQ92765 325 aa10.56□□□□□ -0.72
CPSF6-201ENST00000266679 SLC35D1Q9NTN3 355 aa10.56□□□□□ -0.72
CPSF6-201ENST00000266679 RPUSD1Q9UJJ7 312 aaKnown RBP10.56□□□□□ -0.72
CPSF6-201ENST00000266679 ZGRF1Q86YA3 2104 aa10.56□□□□□ -0.72
CPSF6-201ENST00000266679 TEX15Q9BXT5 2789 aa10.56□□□□□ -0.72
CPSF6-201ENST00000266679 IFITM10A6NMD0 228 aa10.56□□□□□ -0.72
CPSF6-201ENST00000266679 H7BYZ3 331 aa10.56□□□□□ -0.72
CPSF6-201ENST00000266679 THBDP07204 575 aa10.56□□□□□ -0.72
CPSF6-201ENST00000266679 TRGC1P0CF51 173 aa10.56□□□□□ -0.72
CPSF6-201ENST00000266679 ARL14EPLP0DKL9 152 aa10.56□□□□□ -0.72
CPSF6-201ENST00000266679 HSPE1P61604 102 aaKnown RBP10.56□□□□□ -0.72
CPSF6-201ENST00000266679 ARSJQ5FYB0 599 aaPredicted RBP10.56□□□□□ -0.72
CPSF6-201ENST00000266679 GFRALQ6UXV0 394 aa10.56□□□□□ -0.72
CPSF6-201ENST00000266679 RND1Q92730 232 aa10.56□□□□□ -0.72
CPSF6-201ENST00000266679 CORO2AQ92828 525 aa10.56□□□□□ -0.72
CPSF6-201ENST00000266679 C1orf159Q96HA4 380 aa10.56□□□□□ -0.72
CPSF6-201ENST00000266679 TRBV24-1A0A075B6N3 115 aa10.55□□□□□ -0.72
CPSF6-201ENST00000266679 hADV38S2A0JD32 116 aa10.55□□□□□ -0.72
CPSF6-201ENST00000266679 C17orf100A8MU93 164 aa10.55□□□□□ -0.72
CPSF6-201ENST00000266679 HRASP01112 189 aa10.55□□□□□ -0.72
CPSF6-201ENST00000266679 IL6RP08887 468 aaPredicted RBP10.55□□□□□ -0.72
CPSF6-201ENST00000266679 CT45A6P0DMU7 189 aa10.55□□□□□ -0.72
CPSF6-201ENST00000266679 CT45A5P0DMU8 189 aa10.55□□□□□ -0.72
CPSF6-201ENST00000266679 CT45A7P0DMV0 189 aa10.55□□□□□ -0.72
CPSF6-201ENST00000266679 TNFRSF1AP19438 455 aa10.55□□□□□ -0.72
CPSF6-201ENST00000266679 GALR1P47211 349 aa10.55□□□□□ -0.72
CPSF6-201ENST00000266679 CDX1P47902 265 aaPredicted RBP10.55□□□□□ -0.72
CPSF6-201ENST00000266679 S100A12P80511 92 aa10.55□□□□□ -0.72
CPSF6-201ENST00000266679 CLEC12BQ2HXU8 276 aa10.55□□□□□ -0.72
CPSF6-201ENST00000266679 SLC25A48Q6ZT89 311 aaKnown RBP10.55□□□□□ -0.72
CPSF6-201ENST00000266679 OR51G1Q8NGK1 321 aa10.55□□□□□ -0.72
CPSF6-201ENST00000266679 RAB1CQ92928 201 aa10.55□□□□□ -0.72
CPSF6-201ENST00000266679 ELOVL1Q9BW60 279 aa10.55□□□□□ -0.72
CPSF6-201ENST00000266679 ELOVL5Q9NYP7 299 aa10.55□□□□□ -0.72
CPSF6-201ENST00000266679 SLC25A10Q9UBX3 287 aaPredicted RBP10.55□□□□□ -0.72
CPSF6-201ENST00000266679 IGKV1-16P04430 117 aa10.54□□□□□ -0.72
CPSF6-201ENST00000266679 GNB1P62873 340 aa10.54□□□□□ -0.72
CPSF6-201ENST00000266679 PDZD11Q5EBL8 140 aa10.54□□□□□ -0.72
CPSF6-201ENST00000266679 ABHD5Q8WTS1 349 aa10.54□□□□□ -0.72
CPSF6-201ENST00000266679 OR5B12Q96R08 314 aa10.54□□□□□ -0.72
CPSF6-201ENST00000266679 LINC00574Q9H8X3 128 aa10.54□□□□□ -0.72
CPSF6-201ENST00000266679 LINC00312Q9Y6C7 94 aa10.54□□□□□ -0.72
CPSF6-201ENST00000266679 CELSR2Q9HCU4 2923 aa10.54□□□□□ -0.72
CPSF6-201ENST00000266679 PFN1P07737 140 aaKnown RBP10.54□□□□□ -0.72
CPSF6-201ENST00000266679 RNF224P0DH78 156 aa10.54□□□□□ -0.72
CPSF6-201ENST00000266679 CCL3L1P16619 93 aa10.54□□□□□ -0.72
CPSF6-201ENST00000266679 B2MP61769 119 aa10.54□□□□□ -0.72
CPSF6-201ENST00000266679 RTL8BQ17RB0 113 aa10.54□□□□□ -0.72
CPSF6-201ENST00000266679 GFI1BQ5VTD9 330 aa10.54□□□□□ -0.72
CPSF6-201ENST00000266679 SPATA31B1PQ5VZV4 182 aa10.54□□□□□ -0.72
CPSF6-201ENST00000266679 HIST2H2BCQ6DN03 193 aa10.54□□□□□ -0.72
CPSF6-201ENST00000266679 TMEM204Q9BSN7 226 aa10.54□□□□□ -0.72
CPSF6-201ENST00000266679 NPVFQ9HCQ7 196 aa10.54□□□□□ -0.72
CPSF6-201ENST00000266679 AURKAIP1Q9NWT8 199 aaPredicted RBP10.54□□□□□ -0.72
CPSF6-201ENST00000266679 LSM4Q9Y4Z0 139 aaKnown RBP10.54□□□□□ -0.72
CPSF6-201ENST00000266679 UPK2O00526 184 aa10.53□□□□□ -0.72
CPSF6-201ENST00000266679 TGOLN2O43493 480 aa10.53□□□□□ -0.72
CPSF6-201ENST00000266679 PDE6DO43924 150 aa10.53□□□□□ -0.72
CPSF6-201ENST00000266679 SOX15O60248 233 aa10.53□□□□□ -0.72
CPSF6-201ENST00000266679 NDUFS6O75380 124 aaKnown RBP10.53□□□□□ -0.72
CPSF6-201ENST00000266679 S100PP25815 95 aa10.53□□□□□ -0.72
CPSF6-201ENST00000266679 POU2AF1Q16633 256 aa10.53□□□□□ -0.72
CPSF6-201ENST00000266679 TMEM30BQ3MIR4 351 aa10.53□□□□□ -0.72
CPSF6-201ENST00000266679 STPG3Q8N7X2 389 aa10.53□□□□□ -0.72
CPSF6-201ENST00000266679 OR10A7Q8NGE5 316 aa10.53□□□□□ -0.72
CPSF6-201ENST00000266679 DERL1Q9BUN8 251 aa10.53□□□□□ -0.72
CPSF6-201ENST00000266679 MRPL20Q9BYC9 149 aaKnown RBP10.53□□□□□ -0.72
CPSF6-201ENST00000266679 SAP30LQ9HAJ7 183 aa10.53□□□□□ -0.72
CPSF6-201ENST00000266679 PLEKHA3Q9HB20 300 aa10.53□□□□□ -0.72
CPSF6-201ENST00000266679 KCNIP2Q9NS61 270 aa10.53□□□□□ -0.72
CPSF6-201ENST00000266679 PRNDQ9UKY0 176 aa10.53□□□□□ -0.72
CPSF6-201ENST00000266679 UNC79Q9P2D8 2635 aa10.53□□□□□ -0.72
CPSF6-201ENST00000266679 SRRM4A7MD48 611 aaKnown RBP10.53□□□□□ -0.72
CPSF6-201ENST00000266679 J3QR06 171 aa10.53□□□□□ -0.72
CPSF6-201ENST00000266679 FCN3O75636 299 aa10.53□□□□□ -0.72
CPSF6-201ENST00000266679 FABP1P07148 127 aa10.53□□□□□ -0.72
CPSF6-201ENST00000266679 STAG3L2P0CL84 134 aa10.53□□□□□ -0.72
CPSF6-201ENST00000266679 STAG3L3P0CL85 134 aa10.53□□□□□ -0.72
CPSF6-201ENST00000266679 IGFBP2P18065 325 aa10.53□□□□□ -0.72
CPSF6-201ENST00000266679 COL8A2P25067 703 aa10.53□□□□□ -0.72
CPSF6-201ENST00000266679 S100A2P29034 98 aa10.53□□□□□ -0.72
CPSF6-201ENST00000266679 RPL31P62899 125 aaKnown RBP10.53□□□□□ -0.72
CPSF6-201ENST00000266679 TEPPQ6URK8 271 aa10.53□□□□□ -0.72
CPSF6-201ENST00000266679 H1FXQ92522 213 aaKnown RBP10.53□□□□□ -0.72
CPSF6-201ENST00000266679 GAL3ST2Q9H3Q3 398 aa10.53□□□□□ -0.72
CPSF6-201ENST00000266679 PHOX2AO14813 284 aa10.52□□□□□ -0.73
CPSF6-201ENST00000266679 PPP1R2P9O14990 202 aa10.52□□□□□ -0.73
CPSF6-201ENST00000266679 NDUFB4O95168 129 aa10.52□□□□□ -0.73
CPSF6-201ENST00000266679 CXorf1O96002 111 aa10.52□□□□□ -0.73
CPSF6-201ENST00000266679 SOD3P08294 240 aa10.52□□□□□ -0.73
CPSF6-201ENST00000266679 TMEM249Q2WGJ8 235 aa10.52□□□□□ -0.73
CPSF6-201ENST00000266679 GSN-AS1Q9NRJ2 163 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms