RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 KCNIP2Q9NS61 270 aa10.65□□□□□ -0.7
SLIRP-201ENST00000238688 FBN3Q75N90 2809 aa10.64□□□□□ -0.71
SLIRP-201ENST00000238688 RAB19A4D1S5 217 aa10.64□□□□□ -0.71
SLIRP-201ENST00000238688 KCNAB3O43448 404 aa10.64□□□□□ -0.71
SLIRP-201ENST00000238688 TGFAP01135 160 aa10.64□□□□□ -0.71
SLIRP-201ENST00000238688 SAA1P0DJI8 122 aaPredicted RBP10.64□□□□□ -0.71
SLIRP-201ENST00000238688 IAPPP10997 89 aa10.64□□□□□ -0.71
SLIRP-201ENST00000238688 VDAC2P45880 294 aaPredicted RBP10.64□□□□□ -0.71
SLIRP-201ENST00000238688 DYNLT3P51808 116 aa10.64□□□□□ -0.71
SLIRP-201ENST00000238688 UBE2E1P51965 193 aa10.64□□□□□ -0.71
SLIRP-201ENST00000238688 F2RL1P55085 397 aa10.64□□□□□ -0.71
SLIRP-201ENST00000238688 RPS16P62249 146 aaKnown RBP10.64□□□□□ -0.71
SLIRP-201ENST00000238688 SLC38A11Q08AI6 406 aa10.64□□□□□ -0.71
SLIRP-201ENST00000238688 VWC2Q2TAL6 325 aa10.64□□□□□ -0.71
SLIRP-201ENST00000238688 TPTE2P1Q5T6R2 138 aa10.64□□□□□ -0.71
SLIRP-201ENST00000238688 UQCC3Q6UW78 93 aa10.64□□□□□ -0.71
SLIRP-201ENST00000238688 IL34Q6ZMJ4 242 aa10.64□□□□□ -0.71
SLIRP-201ENST00000238688 MMD2Q8IY49 270 aa10.64□□□□□ -0.71
SLIRP-201ENST00000238688 PNKDQ8N490 385 aa10.64□□□□□ -0.71
SLIRP-201ENST00000238688 SCGB1C1Q8TD33 95 aa10.64□□□□□ -0.71
SLIRP-201ENST00000238688 QTRT1Q9BXR0 403 aaKnown RBP10.64□□□□□ -0.71
SLIRP-201ENST00000238688 COMMD5Q9GZQ3 224 aa10.64□□□□□ -0.71
SLIRP-201ENST00000238688 PLEKHA3Q9HB20 300 aa10.64□□□□□ -0.71
SLIRP-201ENST00000238688 HEYLQ9NQ87 328 aaPredicted RBP10.64□□□□□ -0.71
SLIRP-201ENST00000238688 OR51B2Q9Y5P1 312 aa10.64□□□□□ -0.71
SLIRP-201ENST00000238688 BTBD17A6NE02 478 aa10.63□□□□□ -0.71
SLIRP-201ENST00000238688 TEX46H3BTG2 121 aa10.63□□□□□ -0.71
SLIRP-201ENST00000238688 CST7O76096 145 aa10.63□□□□□ -0.71
SLIRP-201ENST00000238688 HOXA1P49639 335 aaPredicted RBP10.63□□□□□ -0.71
SLIRP-201ENST00000238688 DVL1P1P54792 670 aaPredicted RBP10.63□□□□□ -0.71
SLIRP-201ENST00000238688 LINC00205P59089 165 aa10.63□□□□□ -0.71
SLIRP-201ENST00000238688 OR2B8PP59922 312 aa10.63□□□□□ -0.71
SLIRP-201ENST00000238688 ARF6P62330 175 aa10.63□□□□□ -0.71
SLIRP-201ENST00000238688 DLK1P80370 383 aa10.63□□□□□ -0.71
SLIRP-201ENST00000238688 SRSF2Q01130 221 aaKnown RBP10.63□□□□□ -0.71
SLIRP-201ENST00000238688 KRTAP24-1Q3LI83 254 aa10.63□□□□□ -0.71
SLIRP-201ENST00000238688 SLC25A24Q6NUK1 477 aa10.63□□□□□ -0.71
SLIRP-201ENST00000238688 SSX9Q7RTT3 188 aa10.63□□□□□ -0.71
SLIRP-201ENST00000238688 CENPVQ7Z7K6 275 aaPredicted RBP10.63□□□□□ -0.71
SLIRP-201ENST00000238688 LFNGQ8NES3 379 aa10.63□□□□□ -0.71
SLIRP-201ENST00000238688 OR2G3Q8NGZ4 309 aa10.63□□□□□ -0.71
SLIRP-201ENST00000238688 SMIM3Q9BZL3 60 aa10.63□□□□□ -0.71
SLIRP-201ENST00000238688 WFDC1Q9HC57 220 aa10.63□□□□□ -0.71
SLIRP-201ENST00000238688 A0A1W2PPI3 338 aa10.62□□□□□ -0.71
SLIRP-201ENST00000238688 FAM157AC9JC47 383 aa10.62□□□□□ -0.71
SLIRP-201ENST00000238688 TOX4O94842 621 aa10.62□□□□□ -0.71
SLIRP-201ENST00000238688 MBP02144 154 aa10.62□□□□□ -0.71
SLIRP-201ENST00000238688 METTL15P1P0C7V9 234 aa10.62□□□□□ -0.71
SLIRP-201ENST00000238688 SUB1P53999 127 aaKnown RBP eCLIP10.62□□□□□ -0.71
SLIRP-201ENST00000238688 LGALS4P56470 323 aa10.62□□□□□ -0.71
SLIRP-201ENST00000238688 CLINT1Q14677 625 aa10.62□□□□□ -0.71
SLIRP-201ENST00000238688 LRRC75BQ2VPJ9 315 aa10.62□□□□□ -0.71
SLIRP-201ENST00000238688 VMO1Q7Z5L0 202 aa10.62□□□□□ -0.71
SLIRP-201ENST00000238688 COMMD7Q86VX2 200 aa10.62□□□□□ -0.71
SLIRP-201ENST00000238688 SLC7A5P1Q8MH63 180 aa10.62□□□□□ -0.71
SLIRP-201ENST00000238688 LYPD6BQ8NI32 183 aa10.62□□□□□ -0.71
SLIRP-201ENST00000238688 MALSU1Q96EH3 234 aa10.62□□□□□ -0.71
SLIRP-201ENST00000238688 UQCC1Q9NVA1 299 aa10.62□□□□□ -0.71
SLIRP-201ENST00000238688 PMS2P5A8MQ11 134 aa10.61□□□□□ -0.71
SLIRP-201ENST00000238688 ZNF705EA8MWA4 302 aaPredicted RBP10.61□□□□□ -0.71
SLIRP-201ENST00000238688 H3BP45 60 aa10.61□□□□□ -0.71
SLIRP-201ENST00000238688 IFNA10P01566 189 aa10.61□□□□□ -0.71
SLIRP-201ENST00000238688 IGLV2-23P01705 113 aa10.61□□□□□ -0.71
SLIRP-201ENST00000238688 SRD5A1P18405 259 aa10.61□□□□□ -0.71
SLIRP-201ENST00000238688 COX7A1P24310 79 aa10.61□□□□□ -0.71
SLIRP-201ENST00000238688 NPY1RP25929 384 aa10.61□□□□□ -0.71
SLIRP-201ENST00000238688 ZFP36P26651 326 aaKnown RBP10.61□□□□□ -0.71
SLIRP-201ENST00000238688 ERHP84090 104 aaKnown RBP10.61□□□□□ -0.71
SLIRP-201ENST00000238688 BSXQ3C1V8 233 aa10.61□□□□□ -0.71
SLIRP-201ENST00000238688 C2orf83Q53S99 150 aa10.61□□□□□ -0.71
SLIRP-201ENST00000238688 HCP5Q6MZN7 132 aa10.61□□□□□ -0.71
SLIRP-201ENST00000238688 TMEM217Q8N7C4 229 aa10.61□□□□□ -0.71
SLIRP-201ENST00000238688 LINC01356Q8N9X3 169 aa10.61□□□□□ -0.71
SLIRP-201ENST00000238688 SLC24A4Q8NFF2 622 aa10.61□□□□□ -0.71
SLIRP-201ENST00000238688 OR4C12Q96R67 309 aa10.61□□□□□ -0.71
SLIRP-201ENST00000238688 MMP26Q9NRE1 261 aa10.61□□□□□ -0.71
SLIRP-201ENST00000238688 NDUFA4L2Q9NRX3 87 aa10.61□□□□□ -0.71
SLIRP-201ENST00000238688 FBXO7Q9Y3I1 522 aa10.61□□□□□ -0.71
SLIRP-201ENST00000238688 MFSD2BA6NFX1 497 aa10.6□□□□□ -0.71
SLIRP-201ENST00000238688 SRRM4A7MD48 611 aaKnown RBP10.6□□□□□ -0.71
SLIRP-201ENST00000238688 C15orf62A8K5M9 175 aa10.6□□□□□ -0.71
SLIRP-201ENST00000238688 KRBOX1C9JBD0 128 aa10.6□□□□□ -0.71
SLIRP-201ENST00000238688 C17orf112F2Z3M2 114 aa10.6□□□□□ -0.71
SLIRP-201ENST00000238688 ACTL6BO94805 426 aa10.6□□□□□ -0.71
SLIRP-201ENST00000238688 NXPH3O95157 252 aa10.6□□□□□ -0.71
SLIRP-201ENST00000238688 MOSP00540 346 aa10.6□□□□□ -0.71
SLIRP-201ENST00000238688 ATP6V0CP27449 155 aa10.6□□□□□ -0.71
SLIRP-201ENST00000238688 REG1BP48304 166 aa10.6□□□□□ -0.71
SLIRP-201ENST00000238688 RAB2AP61019 212 aa10.6□□□□□ -0.71
SLIRP-201ENST00000238688 PAX8Q06710 450 aa10.6□□□□□ -0.71
SLIRP-201ENST00000238688 TMEM267Q0VDI3 215 aaPredicted RBP10.6□□□□□ -0.71
SLIRP-201ENST00000238688 EBI3Q14213 229 aa10.6□□□□□ -0.71
SLIRP-201ENST00000238688 MOB3BQ86TA1 216 aa10.6□□□□□ -0.71
SLIRP-201ENST00000238688 THNSL2Q86YJ6 484 aa10.6□□□□□ -0.71
SLIRP-201ENST00000238688 VKORC1L1Q8N0U8 176 aa10.6□□□□□ -0.71
SLIRP-201ENST00000238688 ZNF114Q8NC26 417 aa10.6□□□□□ -0.71
SLIRP-201ENST00000238688 NPBQ8NG41 125 aa10.6□□□□□ -0.71
SLIRP-201ENST00000238688 CACNG8Q8WXS5 425 aa10.6□□□□□ -0.71
SLIRP-201ENST00000238688 TMEM158Q8WZ71 300 aa10.6□□□□□ -0.71
SLIRP-201ENST00000238688 ZDHHC16Q969W1 377 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms