RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Olfr1260Q8VGN9 310 aa11.04□□□□□ -0.64
Nup88-203ENSMUST00000108531 Olfr181Q8VGQ7 317 aa11.04□□□□□ -0.64
Nup88-203ENSMUST00000108531 Tmem19Q91W52 336 aa11.04□□□□□ -0.64
Nup88-203ENSMUST00000108531 Stard4Q99JV5 224 aa11.04□□□□□ -0.64
Nup88-203ENSMUST00000108531 Abhd12Q99LR1 398 aaKnown RBP11.04□□□□□ -0.64
Nup88-203ENSMUST00000108531 Rps21Q9CQR2 83 aaKnown RBP11.04□□□□□ -0.64
Nup88-203ENSMUST00000108531 Olfr1264Q9R0K2 308 aa11.04□□□□□ -0.64
Nup88-203ENSMUST00000108531 F8Q06194 2319 aa11.04□□□□□ -0.64
Nup88-203ENSMUST00000108531 Gm4175D3YTW8 314 aa11.04□□□□□ -0.64
Nup88-203ENSMUST00000108531 Vmn1r167G3UW71 315 aa11.04□□□□□ -0.64
Nup88-203ENSMUST00000108531 Vmn1r114L7N226 321 aa11.04□□□□□ -0.64
Nup88-203ENSMUST00000108531 Vmn1r126L7N2C8 321 aa11.04□□□□□ -0.64
Nup88-203ENSMUST00000108531 Ninj1O70131 152 aa11.04□□□□□ -0.64
Nup88-203ENSMUST00000108531 Gdf1P20863 357 aa11.04□□□□□ -0.64
Nup88-203ENSMUST00000108531 Gstp2P46425 210 aa11.04□□□□□ -0.64
Nup88-203ENSMUST00000108531 Ccr2P51683 373 aa11.04□□□□□ -0.64
Nup88-203ENSMUST00000108531 NfybP63139 207 aa11.04□□□□□ -0.64
Nup88-203ENSMUST00000108531 Coq2Q66JT7 374 aa11.04□□□□□ -0.64
Nup88-203ENSMUST00000108531 Gas2l1Q8JZP9 678 aa11.04□□□□□ -0.64
Nup88-203ENSMUST00000108531 Mrps18cQ8R2L5 143 aaKnown RBP11.04□□□□□ -0.64
Nup88-203ENSMUST00000108531 Olfr281Q8VET6 311 aa11.04□□□□□ -0.64
Nup88-203ENSMUST00000108531 Olfr802Q8VGJ2 312 aa11.04□□□□□ -0.64
Nup88-203ENSMUST00000108531 Prok2Q9QXU7 128 aa11.04□□□□□ -0.64
Nup88-203ENSMUST00000108531 Gpr34Q9R1K6 375 aa11.04□□□□□ -0.64
Nup88-203ENSMUST00000108531 Ighv1-34A0A075B5V2 117 aa11.03□□□□□ -0.64
Nup88-203ENSMUST00000108531 Trbv5A0A0B4J1G9 113 aa11.03□□□□□ -0.64
Nup88-203ENSMUST00000108531 Rpl23a-ps3A0A140T8M7 156 aa11.03□□□□□ -0.64
Nup88-203ENSMUST00000108531 A0A1Y7VIT9 351 aa11.03□□□□□ -0.64
Nup88-203ENSMUST00000108531 Gm12887B1AVM1 119 aa11.03□□□□□ -0.64
Nup88-203ENSMUST00000108531 Olfr739E9Q1P0 309 aa11.03□□□□□ -0.64
Nup88-203ENSMUST00000108531 Olfr913E9Q716 312 aa11.03□□□□□ -0.64
Nup88-203ENSMUST00000108531 Atpif1O35143 106 aa11.03□□□□□ -0.64
Nup88-203ENSMUST00000108531 Rpl23aP62751 156 aaKnown RBP11.03□□□□□ -0.64
Nup88-203ENSMUST00000108531 Gm6760Q0ZNK3 87 aa11.03□□□□□ -0.64
Nup88-203ENSMUST00000108531 EcscrQ3TZW0 214 aa11.03□□□□□ -0.64
Nup88-203ENSMUST00000108531 Cd200r1lQ6XJV6 249 aa11.03□□□□□ -0.64
Nup88-203ENSMUST00000108531 Olfr1299Q7TQX5 312 aa11.03□□□□□ -0.64
Nup88-203ENSMUST00000108531 Lrtm2Q8BGX3 370 aa11.03□□□□□ -0.64
Nup88-203ENSMUST00000108531 Dock9Q8BIK4 2055 aa11.03□□□□□ -0.64
Nup88-203ENSMUST00000108531 Acer2Q8VD53 275 aa11.03□□□□□ -0.64
Nup88-203ENSMUST00000108531 D730048I06RikQ9CQB8 106 aa11.03□□□□□ -0.64
Nup88-203ENSMUST00000108531 ApooQ9DCZ4 198 aa11.03□□□□□ -0.64
Nup88-203ENSMUST00000108531 Fzr1Q9R1K5 493 aa11.03□□□□□ -0.64
Nup88-203ENSMUST00000108531 2410004P03RikA0A087WQY2 205 aa11.03□□□□□ -0.64
Nup88-203ENSMUST00000108531 Gm4787B2RUD9 748 aa11.03□□□□□ -0.64
Nup88-203ENSMUST00000108531 Tex54G3UW99 86 aa11.03□□□□□ -0.64
Nup88-203ENSMUST00000108531 Ca11O70354 328 aa11.03□□□□□ -0.64
Nup88-203ENSMUST00000108531 H2-LP01897 362 aa11.03□□□□□ -0.64
Nup88-203ENSMUST00000108531 Cd74P04441 279 aa11.03□□□□□ -0.64
Nup88-203ENSMUST00000108531 Hoxa5P09021 270 aa11.03□□□□□ -0.64
Nup88-203ENSMUST00000108531 Lef1P27782 397 aa11.03□□□□□ -0.64
Nup88-203ENSMUST00000108531 Npbwr1P49681 329 aa11.03□□□□□ -0.64
Nup88-203ENSMUST00000108531 Gm14851Q5ERJ0 116 aa11.03□□□□□ -0.64
Nup88-203ENSMUST00000108531 Gm20816Q5FWD4 227 aa11.03□□□□□ -0.64
Nup88-203ENSMUST00000108531 Cfhr1Q61406 343 aa11.03□□□□□ -0.64
Nup88-203ENSMUST00000108531 Tmprss3Q8K1T0 453 aa11.03□□□□□ -0.64
Nup88-203ENSMUST00000108531 Scgb2b27Q8R1E9 112 aa11.03□□□□□ -0.64
Nup88-203ENSMUST00000108531 Olfr1412Q8VET3 321 aa11.03□□□□□ -0.64
Nup88-203ENSMUST00000108531 Olfr206Q8VGP9 306 aa11.03□□□□□ -0.64
Nup88-203ENSMUST00000108531 NgfrQ9Z0W1 417 aa11.03□□□□□ -0.64
Nup88-203ENSMUST00000108531 Ccpg1osV9GXK1 122 aa11.03□□□□□ -0.64
Nup88-203ENSMUST00000108531 Trav15-2-dv6-2A0A075B650 123 aa11.02□□□□□ -0.64
Nup88-203ENSMUST00000108531 Gm21788J3QNH3 180 aa11.02□□□□□ -0.64
Nup88-203ENSMUST00000108531 Olfr62L7MU75 315 aa11.02□□□□□ -0.64
Nup88-203ENSMUST00000108531 Hmgb3O54879 200 aaKnown RBP11.02□□□□□ -0.64
Nup88-203ENSMUST00000108531 Bloc1s1O55102 125 aa11.02□□□□□ -0.64
Nup88-203ENSMUST00000108531 Ifna7P06799 190 aa11.02□□□□□ -0.64
Nup88-203ENSMUST00000108531 Prdm6Q3UZD5 596 aa11.02□□□□□ -0.64
Nup88-203ENSMUST00000108531 Gm1527Q3V0P3 650 aa11.02□□□□□ -0.64
Nup88-203ENSMUST00000108531 Apobec4Q497M3 374 aa11.02□□□□□ -0.64
Nup88-203ENSMUST00000108531 Cdv3Q4VAA2 281 aaKnown RBP11.02□□□□□ -0.64
Nup88-203ENSMUST00000108531 Ifna16Q810G1 189 aa11.02□□□□□ -0.64
Nup88-203ENSMUST00000108531 Sirt7Q8BKJ9 402 aa11.02□□□□□ -0.64
Nup88-203ENSMUST00000108531 Nadk2Q8C5H8 452 aa11.02□□□□□ -0.64
Nup88-203ENSMUST00000108531 Exosc2Q8VBV3 293 aaKnown RBP11.02□□□□□ -0.64
Nup88-203ENSMUST00000108531 Slc6a8Q8VBW1 640 aa11.02□□□□□ -0.64
Nup88-203ENSMUST00000108531 Olfr136Q8VG72 312 aa11.02□□□□□ -0.64
Nup88-203ENSMUST00000108531 Cela3bQ9CQ52 269 aa11.02□□□□□ -0.64
Nup88-203ENSMUST00000108531 Jag2Q9QYE5 1247 aa11.02□□□□□ -0.64
Nup88-203ENSMUST00000108531 Tet1Q3URK3 2007 aaKnown RBP11.02□□□□□ -0.65
Nup88-203ENSMUST00000108531 Eml6Q5SQM0 1958 aa11.02□□□□□ -0.65
Nup88-203ENSMUST00000108531 Igkv14-100A0A0G2JG36 117 aa11.02□□□□□ -0.65
Nup88-203ENSMUST00000108531 Olfr1496B9EHG2 317 aa11.02□□□□□ -0.65
Nup88-203ENSMUST00000108531 Gm8882E9Q7E4 283 aa11.02□□□□□ -0.65
Nup88-203ENSMUST00000108531 Gm20821J3QPJ2 227 aa11.02□□□□□ -0.65
Nup88-203ENSMUST00000108531 Vmn1r128L7N2B4 307 aa11.02□□□□□ -0.65
Nup88-203ENSMUST00000108531 Fpr2O88536 351 aa11.02□□□□□ -0.65
Nup88-203ENSMUST00000108531 P18528 98 aa11.02□□□□□ -0.65
Nup88-203ENSMUST00000108531 Rab19P35294 217 aa11.02□□□□□ -0.65
Nup88-203ENSMUST00000108531 Lefty1Q64280 368 aa11.02□□□□□ -0.65
Nup88-203ENSMUST00000108531 Dcaf12Q8BGZ3 453 aa11.02□□□□□ -0.65
Nup88-203ENSMUST00000108531 Olfr654Q8VF27 341 aa11.02□□□□□ -0.65
Nup88-203ENSMUST00000108531 Olfr483Q8VG05 315 aa11.02□□□□□ -0.65
Nup88-203ENSMUST00000108531 Mus81Q91ZJ0 551 aa11.02□□□□□ -0.65
Nup88-203ENSMUST00000108531 Rnps1Q99M28 305 aaKnown RBP11.02□□□□□ -0.65
Nup88-203ENSMUST00000108531 Ccdc198Q9CPZ1 294 aa11.02□□□□□ -0.65
Nup88-203ENSMUST00000108531 Rpusd4Q9CWX4 377 aaKnown RBP11.02□□□□□ -0.65
Nup88-203ENSMUST00000108531 Slc50a1Q9CXK4 221 aa11.02□□□□□ -0.65
Nup88-203ENSMUST00000108531 Rnase6Q9D244 153 aa11.02□□□□□ -0.65
Nup88-203ENSMUST00000108531 Ccdc54Q9DAL3 329 aa11.02□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 8.8 ms