RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Pgam5Q8BX10 288 aa8.92□□□□□ -0.98
Ubr1-201ENSMUST00000028728 CroccQ8CJ40 2009 aa8.92□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Thoc3Q8VE80 351 aa8.92□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Sp7Q8VI67 428 aa8.92□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Adamtsl1Q8BLI0 1745 aa8.92□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Ighv14-4A0A0A6YVR1 117 aa8.92□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Gm6880A3KG45 208 aa8.92□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Rnf212F6TQD1 307 aa8.92□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Nat8f4G5E8L3 226 aa8.92□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Gpr27O54897 379 aa8.92□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Phxr1P15973 60 aa8.92□□□□□ -0.98
Ubr1-201ENSMUST00000028728 TecrlQ8BFZ1 361 aa8.92□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Pias2Q8C5D8 621 aa8.92□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Abhd14aQ922Q6 247 aa8.92□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Ctag2Q9D9S4 219 aa8.92□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Mbnl1Q9JKP5 341 aaKnown RBP8.92□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Bcl2l10Q9Z0F3 191 aa8.92□□□□□ -0.98
Ubr1-201ENSMUST00000028728 CrpP14847 225 aa8.92□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Spam1P48794 512 aa8.92□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Sult1a1P52840 291 aa8.92□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Gm10840Q3V2K9 103 aa8.92□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Trmt61aQ80XC2 290 aa8.92□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Fcrl1Q8R4Y0 343 aa8.92□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Akirin1Q99LF1 191 aa8.92□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Prss21Q9JHJ7 324 aa8.92□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Trav12-2A0N8N6 114 aa8.92□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Gm28305F6U473 122 aa8.92□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Tesk1O70146 627 aa8.92□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Defa6P50704 93 aa8.92□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Slc25a5P51881 298 aaKnown RBP8.92□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Rtp2Q80ZI2 223 aa8.92□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Hsd17b13Q8VCR2 304 aa8.92□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Acer2Q8VD53 275 aa8.92□□□□□ -0.98
Ubr1-201ENSMUST00000028728 SelenofQ9ERR7 162 aa8.92□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Sh2d2aQ9QXK9 374 aa8.92□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Ajm1A2AJA9 974 aa8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Olfr1116E9PXB8 307 aa8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 G6pcP35576 357 aa8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Rps11P62281 158 aaKnown RBP8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Zfp386Q1WWJ5 626 aa8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Thap4Q6P3Z3 569 aa8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Olfr1131Q7TR45 309 aa8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Sdhaf4Q8BTE0 104 aa8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Lrrc10Q8K3W2 274 aa8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Gins3Q9CY94 216 aa8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Dda1Q9D9Z5 102 aa8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 1700025C18RikA2A580 89 aa8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Gm20939L7N243 523 aa8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Defa13P50711 93 aa8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Taar9Q5QD04 348 aa8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Spata22Q5SV06 358 aa8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 BC049730Q810N3 246 aa8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Mrpl20Q9CQL4 149 aa8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Wdr5bQ9D7H2 328 aa8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Q9DAN9 164 aa8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 SiglechB7ZMQ6 332 aa8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Rps16P14131 146 aaKnown RBP8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Tnfsf8P32972 239 aa8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 RflnbQ5SVD0 216 aa8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Dock2Q8C3J5 1828 aa8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Mptx2D3YYJ7 219 aa8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Degs1O09005 323 aa8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Trav8d-2Q5R1B6 112 aa8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Btf3Q64152 204 aaKnown RBP8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Gm13757Q7TR17 305 aa8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Ip6k3Q8BWD2 396 aa8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Mad2l1bpQ9DCX1 276 aa8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Olfr154Q9QY00 318 aa8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Olfr609E9Q4X7 319 aa8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 P01635 115 aa8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 PpiaP17742 164 aaKnown RBP8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 SftpcP21841 193 aa8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Hmga2P52927 108 aa8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Il31Q6EAL8 163 aa8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Olfr1356Q7TQU8 320 aa8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Rpusd1Q8VCZ8 306 aa8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Sf3b5Q923D4 86 aaKnown RBP8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Barx1Q9ER42 254 aa8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 NgbQ9ER97 151 aa8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 TriobpQ99KW3 2014 aa8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Trbv29A0A0G2LB96 114 aa8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Olfr467L7N455 308 aa8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 P01803 113 aa8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 SrstQ06666 185 aa8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 StumQ0VBF8 141 aa8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 NmsQ5H8A1 153 aa8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Tnfsf18Q7TS55 173 aa8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Spock3Q8BKV0 436 aa8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Clec2hQ8C1T8 218 aa8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 SdhdQ9CXV1 159 aa8.91□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Zfp334A2A4U6 679 aa8.9□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Lgals9O08573 353 aaKnown RBP8.9□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Defa-rs1P17533 116 aa8.9□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Fabp6P51162 128 aa8.9□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Ube2l3P68037 154 aaKnown RBP8.9□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Trav3-3Q5R1C3 114 aa8.9□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Lrfn3Q8BLY3 626 aa8.9□□□□□ -0.98
Ubr1-201ENSMUST00000028728 CrhQ8CIT0 187 aa8.9□□□□□ -0.98
Ubr1-201ENSMUST00000028728 PaxxQ8K0Y7 205 aa8.9□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Olfr1272Q8VGN8 308 aa8.9□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 10.8 ms