RNA–Protein interactions for RNA: ENST00000630539.1

CLPTM1L-216, Transcript of CLPTM1 like, humanhuman

TSL 5 BASIC

Gene CLPTM1L, Length 2,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1L-216ENST00000630539 ZNF695Q8IW36 515 aa13.2□□□□□ -0.3
CLPTM1L-216ENST00000630539 SPIN2AQ99865 258 aa13.2□□□□□ -0.3
CLPTM1L-216ENST00000630539 SPIN2BQ9BPZ2 258 aa13.2□□□□□ -0.3
CLPTM1L-216ENST00000630539 AIFM2Q9BRQ8 373 aa13.2□□□□□ -0.3
CLPTM1L-216ENST00000630539 YAE1D1Q9NRH1 226 aa13.2□□□□□ -0.3
CLPTM1L-216ENST00000630539 A0A1W2PPI3 338 aa13.2□□□□□ -0.3
CLPTM1L-216ENST00000630539 FCGR3BO75015 233 aa13.2□□□□□ -0.3
CLPTM1L-216ENST00000630539 IGKV1-16P04430 117 aa13.2□□□□□ -0.3
CLPTM1L-216ENST00000630539 CD24P25063 80 aa13.2□□□□□ -0.3
CLPTM1L-216ENST00000630539 CEACAM3P40198 252 aa13.2□□□□□ -0.3
CLPTM1L-216ENST00000630539 ZNF66Q6ZN08 573 aa13.2□□□□□ -0.3
CLPTM1L-216ENST00000630539 Q71RC1 249 aaPredicted RBP13.2□□□□□ -0.3
CLPTM1L-216ENST00000630539 COMMD1Q8N668 190 aa13.2□□□□□ -0.3
CLPTM1L-216ENST00000630539 DDB2Q92466 427 aa13.2□□□□□ -0.3
CLPTM1L-216ENST00000630539 NABP2Q9BQ15 211 aa13.2□□□□□ -0.3
CLPTM1L-216ENST00000630539 TBL2Q9Y4P3 447 aaKnown RBP13.2□□□□□ -0.3
CLPTM1L-216ENST00000630539 TIMM23O14925 209 aa13.19□□□□□ -0.3
CLPTM1L-216ENST00000630539 CD99P14209 185 aa13.19□□□□□ -0.3
CLPTM1L-216ENST00000630539 NKX2-1P43699 371 aaPredicted RBP13.19□□□□□ -0.3
CLPTM1L-216ENST00000630539 NPBWR1P48145 328 aa13.19□□□□□ -0.3
CLPTM1L-216ENST00000630539 RAB5CP51148 216 aa13.19□□□□□ -0.3
CLPTM1L-216ENST00000630539 ZNF816Q0VGE8 651 aaPredicted RBP13.19□□□□□ -0.3
CLPTM1L-216ENST00000630539 CATR1Q13166 79 aa13.19□□□□□ -0.3
CLPTM1L-216ENST00000630539 FAM120AOSQ5T036 256 aa13.19□□□□□ -0.3
CLPTM1L-216ENST00000630539 MINOS1Q5TGZ0 78 aa13.19□□□□□ -0.3
CLPTM1L-216ENST00000630539 FAM71F2Q6NXP2 309 aa13.19□□□□□ -0.3
CLPTM1L-216ENST00000630539 TMEM88Q6PEY1 159 aa13.19□□□□□ -0.3
CLPTM1L-216ENST00000630539 MOB3BQ86TA1 216 aa13.19□□□□□ -0.3
CLPTM1L-216ENST00000630539 BCL6BQ8N143 479 aaPredicted RBP13.19□□□□□ -0.3
CLPTM1L-216ENST00000630539 NANPQ8TBE9 248 aa13.19□□□□□ -0.3
CLPTM1L-216ENST00000630539 TMUB1Q9BVT8 246 aa13.19□□□□□ -0.3
CLPTM1L-216ENST00000630539 LIN7CQ9NUP9 197 aaKnown RBP13.19□□□□□ -0.3
CLPTM1L-216ENST00000630539 MINOS1-NBL1R4GNA1 71 aa13.19□□□□□ -0.3
CLPTM1L-216ENST00000630539 C9JQL5 133 aa13.18□□□□□ -0.3
CLPTM1L-216ENST00000630539 H0Y980 276 aa13.18□□□□□ -0.3
CLPTM1L-216ENST00000630539 LY6G6DO95868 133 aa13.18□□□□□ -0.3
CLPTM1L-216ENST00000630539 SFTA3P0C7M3 94 aa13.18□□□□□ -0.3
CLPTM1L-216ENST00000630539 RAB13P51153 203 aa13.18□□□□□ -0.3
CLPTM1L-216ENST00000630539 EWSR1Q01844 656 aaKnown RBP eCLIP13.18□□□□□ -0.31e-6■■□□□ 14.2
CLPTM1L-216ENST00000630539 ZNF585BQ52M93 769 aa13.18□□□□□ -0.3
CLPTM1L-216ENST00000630539 FBLN7Q53RD9 439 aa13.18□□□□□ -0.3
CLPTM1L-216ENST00000630539 NMSQ5H8A3 153 aa13.18□□□□□ -0.3
CLPTM1L-216ENST00000630539 OR2C3Q8N628 320 aa13.18□□□□□ -0.3
CLPTM1L-216ENST00000630539 IL22RA2Q969J5 263 aa13.18□□□□□ -0.3
CLPTM1L-216ENST00000630539 CACFD1Q9UGQ2 172 aa13.18□□□□□ -0.3
CLPTM1L-216ENST00000630539 ANK3Q12955 4377 aaKnown RBP13.18□□□□□ -0.3
CLPTM1L-216ENST00000630539 MDFIC2A0A1B0GVS7 189 aa13.18□□□□□ -0.3
CLPTM1L-216ENST00000630539 RNF212BA8MTL3 300 aa13.18□□□□□ -0.3
CLPTM1L-216ENST00000630539 H0YJW9 148 aa13.18□□□□□ -0.3
CLPTM1L-216ENST00000630539 H7C2Y5 167 aa13.18□□□□□ -0.3
CLPTM1L-216ENST00000630539 AGPAT2O15120 278 aa13.18□□□□□ -0.3
CLPTM1L-216ENST00000630539 VDAC1P21796 283 aa13.18□□□□□ -0.3
CLPTM1L-216ENST00000630539 THBS3P49746 956 aa13.18□□□□□ -0.3
CLPTM1L-216ENST00000630539 SCRT1Q9BWW7 348 aa13.18□□□□□ -0.3
CLPTM1L-216ENST00000630539 TSPAN15O95858 294 aa13.17□□□□□ -0.3
CLPTM1L-216ENST00000630539 FSHBP01225 129 aa13.17□□□□□ -0.3
CLPTM1L-216ENST00000630539 PVALBP20472 110 aaPredicted RBP13.17□□□□□ -0.3
CLPTM1L-216ENST00000630539 SNCAP37840 140 aa13.17□□□□□ -0.3
CLPTM1L-216ENST00000630539 ID3Q02535 119 aa13.17□□□□□ -0.3
CLPTM1L-216ENST00000630539 OR5AN1Q8NGI8 311 aa13.17□□□□□ -0.3
CLPTM1L-216ENST00000630539 MALSU1Q96EH3 234 aa13.17□□□□□ -0.3
CLPTM1L-216ENST00000630539 STRAPQ9Y3F4 350 aaKnown RBP13.17□□□□□ -0.3
CLPTM1L-216ENST00000630539 FAM24AA6NFZ4 105 aa13.17□□□□□ -0.3
CLPTM1L-216ENST00000630539 S1PR2O95136 353 aa13.17□□□□□ -0.3
CLPTM1L-216ENST00000630539 POLR2GP62487 172 aaKnown RBP eCLIP13.17□□□□□ -0.3
CLPTM1L-216ENST00000630539 CBLN2Q8IUK8 224 aa13.17□□□□□ -0.3
CLPTM1L-216ENST00000630539 GSX1Q9H4S2 264 aaPredicted RBP13.17□□□□□ -0.3
CLPTM1L-216ENST00000630539 SLC35D1Q9NTN3 355 aa13.17□□□□□ -0.3
CLPTM1L-216ENST00000630539 PRELID3BQ9Y3B1 194 aa13.17□□□□□ -0.3
CLPTM1L-216ENST00000630539 MAST4O15021 2626 aa13.16□□□□□ -0.3
CLPTM1L-216ENST00000630539 TXNL1O43396 289 aa13.16□□□□□ -0.3
CLPTM1L-216ENST00000630539 IGKV1-39P01597 117 aa13.16□□□□□ -0.3
CLPTM1L-216ENST00000630539 IGKV1D-39P04432 117 aa13.16□□□□□ -0.3
CLPTM1L-216ENST00000630539 SERPINE2P07093 398 aa13.16□□□□□ -0.3
CLPTM1L-216ENST00000630539 FLI1Q01543 452 aaPredicted RBP13.16□□□□□ -0.3
CLPTM1L-216ENST00000630539 CXorf66Q5JRM2 361 aaPredicted RBP13.16□□□□□ -0.3
CLPTM1L-216ENST00000630539 VKORC1L1Q8N0U8 176 aa13.16□□□□□ -0.3
CLPTM1L-216ENST00000630539 CFHR4Q92496 578 aa13.16□□□□□ -0.3
CLPTM1L-216ENST00000630539 RITA1Q96K30 269 aa13.16□□□□□ -0.3
CLPTM1L-216ENST00000630539 SLC25A31Q9H0C2 315 aa13.16□□□□□ -0.3
CLPTM1L-216ENST00000630539 SH3BGRL3Q9H299 93 aa13.16□□□□□ -0.3
CLPTM1L-216ENST00000630539 LYRM2Q9NU23 88 aaPredicted RBP13.16□□□□□ -0.3
CLPTM1L-216ENST00000630539 IGSF23A1L1A6 192 aa13.15□□□□□ -0.3
CLPTM1L-216ENST00000630539 ADTRPQ96IZ2 230 aa13.15□□□□□ -0.3
CLPTM1L-216ENST00000630539 MTORP42345 2549 aa13.15□□□□□ -0.3
CLPTM1L-216ENST00000630539 PITX3O75364 302 aa13.15□□□□□ -0.3
CLPTM1L-216ENST00000630539 APOA2P02652 100 aa13.15□□□□□ -0.3
CLPTM1L-216ENST00000630539 CAMLGP49069 296 aa13.15□□□□□ -0.3
CLPTM1L-216ENST00000630539 RTL8BQ17RB0 113 aa13.15□□□□□ -0.3
CLPTM1L-216ENST00000630539 CCDC144NLQ6NUI1 221 aa13.15□□□□□ -0.3
CLPTM1L-216ENST00000630539 TMEM252Q8N6L7 170 aa13.15□□□□□ -0.3
CLPTM1L-216ENST00000630539 HSD17B11Q8NBQ5 300 aa13.15□□□□□ -0.3
CLPTM1L-216ENST00000630539 F8P00451 2351 aa13.14□□□□□ -0.31
CLPTM1L-216ENST00000630539 PIGBOS1A0A0B4J2F0 54 aa13.14□□□□□ -0.31
CLPTM1L-216ENST00000630539 KRASP01116 189 aa13.14□□□□□ -0.31
CLPTM1L-216ENST00000630539 IGKV1D-33P01593 117 aa13.14□□□□□ -0.31
CLPTM1L-216ENST00000630539 IGKV1-33P01594 117 aa13.14□□□□□ -0.31
CLPTM1L-216ENST00000630539 FHITP49789 147 aa13.14□□□□□ -0.31
CLPTM1L-216ENST00000630539 ZNF266Q14584 549 aa13.14□□□□□ -0.31
CLPTM1L-216ENST00000630539 PEA15Q15121 130 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms