RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 NPCDR1Q9BY65 106 aa4.52□□□□□ -1.69
NEK3-211ENST00000629912 MRPL20Q9BYC9 149 aaKnown RBP4.52□□□□□ -1.69
NEK3-211ENST00000629912 ACTR3CQ9C0K3 210 aaPredicted RBP4.52□□□□□ -1.69
NEK3-211ENST00000629912 VSIRQ9H7M9 311 aa4.52□□□□□ -1.69
NEK3-211ENST00000629912 TUBA4BQ9H853 241 aa4.52□□□□□ -1.69
NEK3-211ENST00000629912 PATZ1Q9HBE1 687 aaKnown RBP4.52□□□□□ -1.69
NEK3-211ENST00000629912 NPVFQ9HCQ7 196 aa4.52□□□□□ -1.69
NEK3-211ENST00000629912 ENY2Q9NPA8 101 aa4.52□□□□□ -1.69
NEK3-211ENST00000629912 NDUFA4L2Q9NRX3 87 aa4.52□□□□□ -1.69
NEK3-211ENST00000629912 SLC39A9Q9NUM3 307 aa4.52□□□□□ -1.69
NEK3-211ENST00000629912 WASHC3Q9Y3C0 194 aa4.52□□□□□ -1.69
NEK3-211ENST00000629912 ANKHD1Q8IWZ3 2542 aaKnown RBP4.52□□□□□ -1.69
NEK3-211ENST00000629912 COL6A6A6NMZ7 2263 aa4.52□□□□□ -1.69
NEK3-211ENST00000629912 NBEAQ8NFP9 2946 aa4.52□□□□□ -1.69
NEK3-211ENST00000629912 PIEZO1Q92508 2521 aa4.51□□□□□ -1.69
NEK3-211ENST00000629912 HIVEP3Q5T1R4 2406 aa4.51□□□□□ -1.69
NEK3-211ENST00000629912 PPIAL4CA0A0B4J2A2 164 aa4.51□□□□□ -1.69
NEK3-211ENST00000629912 FAM74A7A6NL05 159 aa4.51□□□□□ -1.69
NEK3-211ENST00000629912 SEC14L6B5MCN3 397 aa4.51□□□□□ -1.69
NEK3-211ENST00000629912 LY6LH3BQJ8 138 aa4.51□□□□□ -1.69
NEK3-211ENST00000629912 GOSR1O95249 250 aa4.51□□□□□ -1.69
NEK3-211ENST00000629912 F12P00748 615 aaPredicted RBP4.51□□□□□ -1.69
NEK3-211ENST00000629912 CA2P00918 260 aa4.51□□□□□ -1.69
NEK3-211ENST00000629912 IGKV1D-33P01593 117 aa4.51□□□□□ -1.69
NEK3-211ENST00000629912 IGKV1-33P01594 117 aa4.51□□□□□ -1.69
NEK3-211ENST00000629912 IGLV2-23P01705 113 aa4.51□□□□□ -1.69
NEK3-211ENST00000629912 IFNA4P05014 189 aa4.51□□□□□ -1.69
NEK3-211ENST00000629912 LIPFP07098 398 aa4.51□□□□□ -1.69
NEK3-211ENST00000629912 CRYGBP07316 175 aa4.51□□□□□ -1.69
NEK3-211ENST00000629912 SOD3P08294 240 aa4.51□□□□□ -1.69
NEK3-211ENST00000629912 PPIAL4GP0DN37 164 aa4.51□□□□□ -1.69
NEK3-211ENST00000629912 USF1P22415 310 aaPredicted RBP4.51□□□□□ -1.69
NEK3-211ENST00000629912 NPY1RP25929 384 aa4.51□□□□□ -1.69
NEK3-211ENST00000629912 PAX6P26367 422 aa4.51□□□□□ -1.69
NEK3-211ENST00000629912 GPX4P36969 197 aaPredicted RBP4.51□□□□□ -1.69
NEK3-211ENST00000629912 OPRK1P41145 380 aa4.51□□□□□ -1.69
NEK3-211ENST00000629912 NPBWR1P48145 328 aa4.51□□□□□ -1.69
NEK3-211ENST00000629912 HOXA1P49639 335 aaPredicted RBP4.51□□□□□ -1.69
NEK3-211ENST00000629912 PPT1P50897 306 aa4.51□□□□□ -1.69
NEK3-211ENST00000629912 RAB13P51153 203 aa4.51□□□□□ -1.69
NEK3-211ENST00000629912 RPS16P62249 146 aaKnown RBP4.51□□□□□ -1.69
NEK3-211ENST00000629912 ACOT6Q3I5F7 207 aaPredicted RBP4.51□□□□□ -1.69
NEK3-211ENST00000629912 FAM74A3Q4VXF1 159 aa4.51□□□□□ -1.69
NEK3-211ENST00000629912 SPINK9Q5DT21 86 aa4.51□□□□□ -1.69
NEK3-211ENST00000629912 SOHLH1Q5JUK2 328 aa4.51□□□□□ -1.69
NEK3-211ENST00000629912 FFAR4Q5NUL3 377 aa4.51□□□□□ -1.69
NEK3-211ENST00000629912 ZNF787Q6DD87 383 aa4.51□□□□□ -1.69
NEK3-211ENST00000629912 ACSM6Q6P461 480 aa4.51□□□□□ -1.69
NEK3-211ENST00000629912 LCN15Q6UWW0 184 aa4.51□□□□□ -1.69
NEK3-211ENST00000629912 TREML4Q6UXN2 200 aa4.51□□□□□ -1.69
NEK3-211ENST00000629912 TGIF2LXQ8IUE1 241 aa4.51□□□□□ -1.69
NEK3-211ENST00000629912 SLC24A4Q8NFF2 622 aa4.51□□□□□ -1.69
NEK3-211ENST00000629912 OR8B3Q8NGG8 313 aa4.51□□□□□ -1.69
NEK3-211ENST00000629912 OR10G9Q8NGN4 311 aa4.51□□□□□ -1.69
NEK3-211ENST00000629912 OR10G7Q8NGN6 311 aa4.51□□□□□ -1.69
NEK3-211ENST00000629912 OR1L8Q8NGR8 309 aa4.51□□□□□ -1.69
NEK3-211ENST00000629912 CACNG8Q8WXS5 425 aa4.51□□□□□ -1.69
NEK3-211ENST00000629912 C1orf159Q96HA4 380 aa4.51□□□□□ -1.69
NEK3-211ENST00000629912 OR8B2Q96RD0 313 aa4.51□□□□□ -1.69
NEK3-211ENST00000629912 CLEC7AQ9BXN2 247 aa4.51□□□□□ -1.69
NEK3-211ENST00000629912 CHODLQ9H9P2 273 aa4.51□□□□□ -1.69
NEK3-211ENST00000629912 SMCO4Q9NRQ5 59 aa4.51□□□□□ -1.69
NEK3-211ENST00000629912 ZNRD1Q9P1U0 126 aa4.51□□□□□ -1.69
NEK3-211ENST00000629912 VAX2Q9UIW0 290 aa4.51□□□□□ -1.69
NEK3-211ENST00000629912 TMA7Q9Y2S6 64 aaKnown RBP4.51□□□□□ -1.69
NEK3-211ENST00000629912 LSM4Q9Y4Z0 139 aaKnown RBP4.51□□□□□ -1.69
NEK3-211ENST00000629912 ATRXP46100 2492 aa4.51□□□□□ -1.69
NEK3-211ENST00000629912 IGHV2-26A0A0B4J1V2 119 aa4.5□□□□□ -1.69
NEK3-211ENST00000629912 A0A1B0GV50 99 aa4.5□□□□□ -1.69
NEK3-211ENST00000629912 LOC105371267A0A1B0GV96 52 aa4.5□□□□□ -1.69
NEK3-211ENST00000629912 A0A1W2PN81 502 aa4.5□□□□□ -1.69
NEK3-211ENST00000629912 C7orf77A4D0Y5 90 aa4.5□□□□□ -1.69
NEK3-211ENST00000629912 MAP1LC3B2A6NCE7 125 aa4.5□□□□□ -1.69
NEK3-211ENST00000629912 A6NNC1 897 aa4.5□□□□□ -1.69
NEK3-211ENST00000629912 BUB1B-PAK6H3BSN5 160 aa4.5□□□□□ -1.69
NEK3-211ENST00000629912 M0R1W7 72 aa4.5□□□□□ -1.69
NEK3-211ENST00000629912 TSPAN4O14817 238 aa4.5□□□□□ -1.69
NEK3-211ENST00000629912 KALRNO60229 2985 aa4.5□□□□□ -1.69
NEK3-211ENST00000629912 IFNA1P01562 189 aa4.5□□□□□ -1.69
NEK3-211ENST00000629912 SAA1P0DJI8 122 aaPredicted RBP4.5□□□□□ -1.69
NEK3-211ENST00000629912 OR13C7P0DN81 318 aa4.5□□□□□ -1.69
NEK3-211ENST00000629912 BCL2P10415 239 aa4.5□□□□□ -1.69
NEK3-211ENST00000629912 IGFBP2P18065 325 aa4.5□□□□□ -1.69
NEK3-211ENST00000629912 GNLYP22749 145 aa4.5□□□□□ -1.69
NEK3-211ENST00000629912 MAS1LP35410 378 aa4.5□□□□□ -1.69
NEK3-211ENST00000629912 CHRNA7P36544 502 aa4.5□□□□□ -1.69
NEK3-211ENST00000629912 RPL29P47914 159 aaKnown RBP4.5□□□□□ -1.69
NEK3-211ENST00000629912 RPL8P62917 257 aaKnown RBP4.5□□□□□ -1.69
NEK3-211ENST00000629912 ERHP84090 104 aaKnown RBP4.5□□□□□ -1.69
NEK3-211ENST00000629912 RAB31Q13636 194 aa4.5□□□□□ -1.69
NEK3-211ENST00000629912 DIAPH2-AS1Q14236 149 aa4.5□□□□□ -1.69
NEK3-211ENST00000629912 RHEBQ15382 184 aa4.5□□□□□ -1.69
NEK3-211ENST00000629912 HAGHQ16775 308 aa4.5□□□□□ -1.69
NEK3-211ENST00000629912 MRGPRG-AS1Q2M3A8 158 aa4.5□□□□□ -1.69
NEK3-211ENST00000629912 HLA-DRB5Q30154 266 aa4.5□□□□□ -1.69
NEK3-211ENST00000629912 VMA21Q3ZAQ7 101 aa4.5□□□□□ -1.69
NEK3-211ENST00000629912 ARSJQ5FYB0 599 aaPredicted RBP4.5□□□□□ -1.69
NEK3-211ENST00000629912 AVPI1Q5T686 147 aa4.5□□□□□ -1.69
NEK3-211ENST00000629912 PVRIGQ6DKI7 326 aa4.5□□□□□ -1.69
NEK3-211ENST00000629912 TEPPQ6URK8 271 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms