RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 RHOBP62745 196 aa7.67□□□□□ -1.18
GGA3-222ENST00000621217 TMEM97Q5BJF2 176 aa7.67□□□□□ -1.18
GGA3-222ENST00000621217 ZNF506Q5JVG8 444 aa7.67□□□□□ -1.18
GGA3-222ENST00000621217 DNLZQ5SXM8 178 aa7.67□□□□□ -1.18
GGA3-222ENST00000621217 VKORC1L1Q8N0U8 176 aa7.67□□□□□ -1.18
GGA3-222ENST00000621217 PEF1Q9UBV8 284 aaKnown RBP7.67□□□□□ -1.18
GGA3-222ENST00000621217 SLC45A2Q9UMX9 530 aa7.67□□□□□ -1.18
GGA3-222ENST00000621217 LAMTOR2Q9Y2Q5 125 aa7.67□□□□□ -1.18
GGA3-222ENST00000621217 ZNF503-AS2A6NEH8 195 aa7.67□□□□□ -1.18
GGA3-222ENST00000621217 CTSSP25774 331 aa7.67□□□□□ -1.18
GGA3-222ENST00000621217 RPL13AP40429 203 aaKnown RBP7.67□□□□□ -1.18
GGA3-222ENST00000621217 ACSF3Q4G176 576 aaPredicted RBP7.67□□□□□ -1.18
GGA3-222ENST00000621217 TGIF2LYQ8IUE0 185 aa7.67□□□□□ -1.18
GGA3-222ENST00000621217 ZNRF1Q8ND25 227 aa7.67□□□□□ -1.18
GGA3-222ENST00000621217 CCL13Q99616 98 aa7.67□□□□□ -1.18
GGA3-222ENST00000621217 TMEM208Q9BTX3 173 aa7.67□□□□□ -1.18
GGA3-222ENST00000621217 CYTL1Q9NRR1 136 aa7.67□□□□□ -1.18
GGA3-222ENST00000621217 CISD1Q9NZ45 108 aaKnown RBP7.67□□□□□ -1.18
GGA3-222ENST00000621217 IL18BPO95998 194 aa7.67□□□□□ -1.18
GGA3-222ENST00000621217 APCSP02743 223 aa7.67□□□□□ -1.18
GGA3-222ENST00000621217 SRP19P09132 144 aaKnown RBP7.67□□□□□ -1.18
GGA3-222ENST00000621217 MDS2Q8NDY4 140 aa7.67□□□□□ -1.18
GGA3-222ENST00000621217 OR8G5Q8NG78 346 aa7.67□□□□□ -1.18
GGA3-222ENST00000621217 C1QTNF5Q9BXJ0 243 aa7.67□□□□□ -1.18
GGA3-222ENST00000621217 CXXC4Q9H2H0 198 aa7.67□□□□□ -1.18
GGA3-222ENST00000621217 WFDC1Q9HC57 220 aa7.67□□□□□ -1.18
GGA3-222ENST00000621217 APELAP0DMC3 54 aa7.67□□□□□ -1.18
GGA3-222ENST00000621217 HTR1DP28221 377 aa7.67□□□□□ -1.18
GGA3-222ENST00000621217 CSN1S1P47710 185 aa7.67□□□□□ -1.18
GGA3-222ENST00000621217 REG1BP48304 166 aa7.67□□□□□ -1.18
GGA3-222ENST00000621217 LINC00205P59089 165 aa7.67□□□□□ -1.18
GGA3-222ENST00000621217 ARL16Q0P5N6 197 aa7.67□□□□□ -1.18
GGA3-222ENST00000621217 FAM53AQ6NSI3 398 aaPredicted RBP7.67□□□□□ -1.18
GGA3-222ENST00000621217 POM121L2Q96KW2 1035 aa7.67□□□□□ -1.18
GGA3-222ENST00000621217 RNF122Q9H9V4 155 aa7.67□□□□□ -1.18
GGA3-222ENST00000621217 SAP30LQ9HAJ7 183 aa7.67□□□□□ -1.18
GGA3-222ENST00000621217 LPAR2Q9HBW0 351 aa7.67□□□□□ -1.18
GGA3-222ENST00000621217 HIF1ANQ9NWT6 349 aa7.67□□□□□ -1.18
GGA3-222ENST00000621217 HSPB8Q9UJY1 196 aa7.67□□□□□ -1.18
GGA3-222ENST00000621217 LRRK2Q5S007 2527 aa7.66□□□□□ -1.18
GGA3-222ENST00000621217 NKX6-3A6NJ46 265 aa7.66□□□□□ -1.18
GGA3-222ENST00000621217 WNT5AP41221 380 aa7.66□□□□□ -1.18
GGA3-222ENST00000621217 SAMD13Q5VXD3 122 aa7.66□□□□□ -1.18
GGA3-222ENST00000621217 OR4X1Q8NH49 305 aa7.66□□□□□ -1.18
GGA3-222ENST00000621217 OR5P3Q8WZ94 311 aa7.66□□□□□ -1.18
GGA3-222ENST00000621217 MUC3AQ02505 3323 aa7.66□□□□□ -1.18
GGA3-222ENST00000621217 CA11O75493 328 aa7.66□□□□□ -1.18
GGA3-222ENST00000621217 HBZP02008 142 aa7.66□□□□□ -1.18
GGA3-222ENST00000621217 COX7A1P24310 79 aa7.66□□□□□ -1.18
GGA3-222ENST00000621217 COMPP49747 757 aaPredicted RBP7.66□□□□□ -1.18
GGA3-222ENST00000621217 OR10X1Q8NGY0 326 aa7.66□□□□□ -1.18
GGA3-222ENST00000621217 OR4C12Q96R67 309 aa7.66□□□□□ -1.18
GGA3-222ENST00000621217 MRPL18Q9H0U6 180 aaKnown RBP7.66□□□□□ -1.18
GGA3-222ENST00000621217 ZNF835Q9Y2P0 537 aa7.66□□□□□ -1.18
GGA3-222ENST00000621217 A6NNC1 897 aa7.66□□□□□ -1.18
GGA3-222ENST00000621217 PPIHO43447 177 aaKnown RBP7.66□□□□□ -1.18
GGA3-222ENST00000621217 CA2P00918 260 aa7.66□□□□□ -1.18
GGA3-222ENST00000621217 CD5P06127 495 aa7.66□□□□□ -1.18
GGA3-222ENST00000621217 OTX1P32242 354 aaPredicted RBP7.66□□□□□ -1.18
GGA3-222ENST00000621217 LCN2P80188 198 aa7.66□□□□□ -1.18
GGA3-222ENST00000621217 P2RY6Q15077 328 aa7.66□□□□□ -1.18
GGA3-222ENST00000621217 LDLRAD2Q5SZI1 272 aa7.66□□□□□ -1.18
GGA3-222ENST00000621217 PLPPR1Q8TBJ4 325 aa7.66□□□□□ -1.18
GGA3-222ENST00000621217 S1PR3Q99500 378 aa7.66□□□□□ -1.18
GGA3-222ENST00000621217 FAM117AQ9C073 453 aa7.66□□□□□ -1.18
GGA3-222ENST00000621217 TRBV6-7A0A0A0MS04 114 aa7.65□□□□□ -1.18
GGA3-222ENST00000621217 KBTBD11O94819 623 aa7.65□□□□□ -1.18
GGA3-222ENST00000621217 CCL20P78556 96 aa7.65□□□□□ -1.18
GGA3-222ENST00000621217 FBLN7Q53RD9 439 aa7.65□□□□□ -1.18
GGA3-222ENST00000621217 ACSM6Q6P461 480 aa7.65□□□□□ -1.18
GGA3-222ENST00000621217 Q8IYB0 196 aa7.65□□□□□ -1.18
GGA3-222ENST00000621217 FGFRL1Q8N441 504 aa7.65□□□□□ -1.18
GGA3-222ENST00000621217 OR5D13Q8NGL4 314 aa7.65□□□□□ -1.18
GGA3-222ENST00000621217 SSMEM1Q8WWF3 244 aa7.65□□□□□ -1.18
GGA3-222ENST00000621217 BOD1Q96IK1 185 aa7.65□□□□□ -1.18
GGA3-222ENST00000621217 NCOR1P1Q9H4R4 102 aa7.65□□□□□ -1.18
GGA3-222ENST00000621217 GRIFINA4D1Z8 144 aa7.65□□□□□ -1.18
GGA3-222ENST00000621217 DPRXA6NFQ7 191 aa7.65□□□□□ -1.18
GGA3-222ENST00000621217 KIR2DL2P43627 348 aaPredicted RBP7.65□□□□□ -1.18
GGA3-222ENST00000621217 GNB1P62873 340 aa7.65□□□□□ -1.18
GGA3-222ENST00000621217 C20orf204Q6ZNR8 217 aa7.65□□□□□ -1.18
GGA3-222ENST00000621217 SNRNP40Q96DI7 357 aaKnown RBP7.65□□□□□ -1.18
GGA3-222ENST00000621217 CDC42EP3Q9UKI2 254 aa7.65□□□□□ -1.18
GGA3-222ENST00000621217 SMPD2O60906 423 aa7.65□□□□□ -1.19
GGA3-222ENST00000621217 DEFA4P12838 97 aa7.65□□□□□ -1.19
GGA3-222ENST00000621217 TNFRSF1AP19438 455 aa7.65□□□□□ -1.19
GGA3-222ENST00000621217 BPIFB3P59826 476 aa7.65□□□□□ -1.19
GGA3-222ENST00000621217 TXNDC17Q9BRA2 123 aa7.65□□□□□ -1.19
GGA3-222ENST00000621217 ZFP30Q9Y2G7 519 aa7.65□□□□□ -1.19
GGA3-222ENST00000621217 KLF2Q9Y5W3 355 aaPredicted RBP7.65□□□□□ -1.19
GGA3-222ENST00000621217 TRGV10A0A0A0MS01 117 aa7.64□□□□□ -1.19
GGA3-222ENST00000621217 TRAV24A0A0B4J272 114 aa7.64□□□□□ -1.19
GGA3-222ENST00000621217 A0A1B0GU03 582 aa7.64□□□□□ -1.19
GGA3-222ENST00000621217 A0A1W2PN81 502 aa7.64□□□□□ -1.19
GGA3-222ENST00000621217 HLA-DQA1P01909 254 aa7.64□□□□□ -1.19
GGA3-222ENST00000621217 CSN3P07498 182 aa7.64□□□□□ -1.19
GGA3-222ENST00000621217 CD3EP07766 207 aa7.64□□□□□ -1.19
GGA3-222ENST00000621217 UQCRFS1P47985 274 aa7.64□□□□□ -1.19
GGA3-222ENST00000621217 TFPI2P48307 235 aa7.64□□□□□ -1.19
GGA3-222ENST00000621217 SUB1P53999 127 aaKnown RBP eCLIP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms