RNA–Protein interactions for RNA: ENST00000616352.4

ACACA-238, Transcript of acetyl-CoA carboxylase alpha, human

TSL 1 (best)

Gene ACACA, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACACA-238	ENST00000616352		Q6ZS46	218 aa		18.2	■□□□□ 0.5
ACACA-238	ENST00000616352	SPIN2A	Q99865	258 aa		18.2	■□□□□ 0.5
ACACA-238	ENST00000616352	SPIN2B	Q9BPZ2	258 aa		18.2	■□□□□ 0.5
ACACA-238	ENST00000616352	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	18.2	■□□□□ 0.5
ACACA-238	ENST00000616352	COMP	P49747	757 aa	Predicted RBP	18.2	■□□□□ 0.5
ACACA-238	ENST00000616352	FCN2	Q15485	313 aa		18.2	■□□□□ 0.5
ACACA-238	ENST00000616352	TNXA	Q16473	311 aa		18.2	■□□□□ 0.5
ACACA-238	ENST00000616352	QTRT1	Q9BXR0	403 aa	Known RBP	18.2	■□□□□ 0.5
ACACA-238	ENST00000616352	MGAT4C	Q9UBM8	478 aa		18.2	■□□□□ 0.5
ACACA-238	ENST00000616352		A0A1B0GVG6	124 aa		18.19	■□□□□ 0.5
ACACA-238	ENST00000616352	TRIM77	I1YAP6	450 aa		18.19	■□□□□ 0.5
ACACA-238	ENST00000616352	IGHG2	P01859	326 aa		18.19	■□□□□ 0.5
ACACA-238	ENST00000616352	CXCL3	P19876	107 aa		18.19	■□□□□ 0.5
ACACA-238	ENST00000616352	H2BFS	P57053	126 aa		18.19	■□□□□ 0.5
ACACA-238	ENST00000616352	IAH1	Q2TAA2	248 aa	Predicted RBP	18.19	■□□□□ 0.5
ACACA-238	ENST00000616352	C10orf55	Q5SWW7	151 aa		18.19	■□□□□ 0.5
ACACA-238	ENST00000616352	THOC7	Q6I9Y2	204 aa	Known RBP	18.19	■□□□□ 0.5
ACACA-238	ENST00000616352	OR11H7	Q8NGC8	314 aa		18.19	■□□□□ 0.5
ACACA-238	ENST00000616352	FKBP11	Q9NYL4	201 aa		18.19	■□□□□ 0.5
ACACA-238	ENST00000616352	OR51B2	Q9Y5P1	312 aa		18.19	■□□□□ 0.5
ACACA-238	ENST00000616352	C13orf42	A0A1B0GVH6	325 aa		18.18	■□□□□ 0.5
ACACA-238	ENST00000616352	FAM25E	A8MYX2	175 aa		18.18	■□□□□ 0.5
ACACA-238	ENST00000616352		E7EUB6	86 aa		18.18	■□□□□ 0.5
ACACA-238	ENST00000616352	ST8SIA3	O43173	380 aa		18.18	■□□□□ 0.5
ACACA-238	ENST00000616352	RBMXL2	O75526	392 aa	Known RBP	18.18	■□□□□ 0.5
ACACA-238	ENST00000616352	ACTL6B	O94805	426 aa		18.18	■□□□□ 0.5
ACACA-238	ENST00000616352	SIX6	O95475	246 aa		18.18	■□□□□ 0.5
ACACA-238	ENST00000616352	GNB1	P62873	340 aa		18.18	■□□□□ 0.5
ACACA-238	ENST00000616352	GSG1L	Q6UXU4	331 aa		18.18	■□□□□ 0.5
ACACA-238	ENST00000616352	ZNF702P	Q9H963	129 aa		18.18	■□□□□ 0.5
ACACA-238	ENST00000616352	ZNF257	Q9Y2Q1	563 aa		18.18	■□□□□ 0.5
ACACA-238	ENST00000616352	TEX50	A0A1B0GTY4	177 aa		18.17	■□□□□ 0.5
ACACA-238	ENST00000616352		A0A1B0GW64	132 aa		18.17	■□□□□ 0.5
ACACA-238	ENST00000616352	C5orf51	A6NDU8	294 aa		18.17	■□□□□ 0.5
ACACA-238	ENST00000616352	LINC01548	A6NM66	108 aa		18.17	■□□□□ 0.5
ACACA-238	ENST00000616352	FXYD3	Q14802	87 aa		18.17	■□□□□ 0.5
ACACA-238	ENST00000616352		Q8N2B8	174 aa		18.17	■□□□□ 0.5
ACACA-238	ENST00000616352	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	18.17	■□□□□ 0.5
ACACA-238	ENST00000616352	OR4D5	Q8NGN0	318 aa		18.17	■□□□□ 0.5
ACACA-238	ENST00000616352	OR5B3	Q8NH48	314 aa		18.17	■□□□□ 0.5
ACACA-238	ENST00000616352	SRSF12	Q8WXF0	261 aa	Known RBP	18.17	■□□□□ 0.5
ACACA-238	ENST00000616352	PRSS22	Q9GZN4	317 aa		18.17	■□□□□ 0.5
ACACA-238	ENST00000616352	COMMD5	Q9GZQ3	224 aa		18.17	■□□□□ 0.5
ACACA-238	ENST00000616352	CGB1	A6NKQ9	187 aa		18.16	■□□□□ 0.5
ACACA-238	ENST00000616352	PDLIM3	Q53GG5	364 aa	Predicted RBP	18.16	■□□□□ 0.5
ACACA-238	ENST00000616352	C9orf152	Q5JTZ5	239 aa		18.16	■□□□□ 0.5
ACACA-238	ENST00000616352	OR52E5	Q8NH55	327 aa		18.16	■□□□□ 0.5
ACACA-238	ENST00000616352	OR1S1	Q8NH92	325 aa		18.16	■□□□□ 0.5
ACACA-238	ENST00000616352	ARPC1A	Q92747	370 aa		18.16	■□□□□ 0.5
ACACA-238	ENST00000616352	C2orf50	Q96LR7	162 aa		18.16	■□□□□ 0.5
ACACA-238	ENST00000616352	CNIH1	O95406	144 aa		18.16	■□□□□ 0.5
ACACA-238	ENST00000616352	OPN1MW	P04001	364 aa		18.16	■□□□□ 0.5
ACACA-238	ENST00000616352	OPN1MW2	P0DN77	364 aa		18.16	■□□□□ 0.5
ACACA-238	ENST00000616352	OPN1MW3	P0DN78	364 aa		18.16	■□□□□ 0.5
ACACA-238	ENST00000616352	RPL27A	P46776	148 aa	Known RBP	18.16	■□□□□ 0.5
ACACA-238	ENST00000616352	HSPE1	P61604	102 aa	Known RBP	18.16	■□□□□ 0.5
ACACA-238	ENST00000616352	SRSF2	Q01130	221 aa	Known RBP	18.16	■□□□□ 0.5
ACACA-238	ENST00000616352	IL15RA	Q13261	267 aa		18.16	■□□□□ 0.5
ACACA-238	ENST00000616352	OR1L8	Q8NGR8	309 aa		18.16	■□□□□ 0.5
ACACA-238	ENST00000616352	NDUFA4L2	Q9NRX3	87 aa		18.16	■□□□□ 0.5
ACACA-238	ENST00000616352	HSPB7	Q9UBY9	170 aa		18.16	■□□□□ 0.5
ACACA-238	ENST00000616352	FBXO7	Q9Y3I1	522 aa		18.16	■□□□□ 0.5
ACACA-238	ENST00000616352	KCNAB3	O43448	404 aa		18.15	■□□□□ 0.5
ACACA-238	ENST00000616352	EGR2	P11161	476 aa	Predicted RBP	18.15	■□□□□ 0.5
ACACA-238	ENST00000616352		Q6ZSV7	163 aa		18.15	■□□□□ 0.5
ACACA-238	ENST00000616352	SLC35E3	Q7Z769	313 aa		18.15	■□□□□ 0.5
ACACA-238	ENST00000616352	hCG_2014768	A0A024R1R8	64 aa		18.14	■□□□□ 0.49
ACACA-238	ENST00000616352	ATP6V0E1	O15342	81 aa		18.14	■□□□□ 0.49
ACACA-238	ENST00000616352	TSPAN9	O75954	239 aa		18.14	■□□□□ 0.49
ACACA-238	ENST00000616352	TNFRSF9	Q07011	255 aa		18.14	■□□□□ 0.49
ACACA-238	ENST00000616352	SRSF4	Q08170	494 aa	Known RBP	18.14	■□□□□ 0.49
ACACA-238	ENST00000616352	CXorf66	Q5JRM2	361 aa	Predicted RBP	18.14	■□□□□ 0.49
ACACA-238	ENST00000616352	GRPEL2	Q8TAA5	225 aa		18.14	■□□□□ 0.49
ACACA-238	ENST00000616352	TAF15	Q92804	592 aa	Known RBP eCLIP	18.14	■□□□□ 0.49	7e-6	■■■□□ 19.1
ACACA-238	ENST00000616352	FAM103A1	Q9BTL3	118 aa	Known RBP	18.14	■□□□□ 0.49
ACACA-238	ENST00000616352	GSKIP	Q9P0R6	139 aa		18.14	■□□□□ 0.49
ACACA-238	ENST00000616352	CACFD1	Q9UGQ2	172 aa		18.14	■□□□□ 0.49
ACACA-238	ENST00000616352	TEX22	C9J3V5	150 aa		18.13	■□□□□ 0.49
ACACA-238	ENST00000616352	FAM90A26	D6RGX4	464 aa		18.13	■□□□□ 0.49
ACACA-238	ENST00000616352	NXPH3	O95157	252 aa		18.13	■□□□□ 0.49
ACACA-238	ENST00000616352	CRIP2	P52943	208 aa	Predicted RBP	18.13	■□□□□ 0.49
ACACA-238	ENST00000616352	SPCS3	P61009	180 aa		18.13	■□□□□ 0.49
ACACA-238	ENST00000616352	PRCD	Q00LT1	54 aa		18.13	■□□□□ 0.49
ACACA-238	ENST00000616352	ID3	Q02535	119 aa		18.13	■□□□□ 0.49
ACACA-238	ENST00000616352	SGMS2	Q8NHU3	365 aa		18.13	■□□□□ 0.49
ACACA-238	ENST00000616352	WDR89	Q96FK6	387 aa	Predicted RBP	18.13	■□□□□ 0.49
ACACA-238	ENST00000616352	NMES1	Q9C002	83 aa		18.13	■□□□□ 0.49
ACACA-238	ENST00000616352	PARP11	Q9NR21	331 aa		18.13	■□□□□ 0.49
ACACA-238	ENST00000616352	ATR	Q13535	2644 aa		18.13	■□□□□ 0.49
ACACA-238	ENST00000616352	HMX3	A6NHT5	357 aa		18.12	■□□□□ 0.49
ACACA-238	ENST00000616352	MSGN1	A6NI15	193 aa		18.12	■□□□□ 0.49
ACACA-238	ENST00000616352	IFNA17	P01571	189 aa		18.12	■□□□□ 0.49
ACACA-238	ENST00000616352	IGF1	P05019	195 aa		18.12	■□□□□ 0.49
ACACA-238	ENST00000616352	CRYBA1	P05813	215 aa		18.12	■□□□□ 0.49
ACACA-238	ENST00000616352	FYTTD1	Q96QD9	318 aa	Known RBP	18.12	■□□□□ 0.49
ACACA-238	ENST00000616352	PDCD10	Q9BUL8	212 aa		18.12	■□□□□ 0.49
ACACA-238	ENST00000616352	TRAPPC2	P0DI81	140 aa		18.12	■□□□□ 0.49
ACACA-238	ENST00000616352	TRAPPC2B	P0DI82	140 aa		18.12	■□□□□ 0.49
ACACA-238	ENST00000616352	TMEM95	Q3KNT9	176 aa		18.12	■□□□□ 0.49
ACACA-238	ENST00000616352	CHAC2	Q8WUX2	184 aa		18.12	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms