RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, human

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-231	ENST00000602190	HSD17B10	Q99714	261 aa	Known RBP	13.42	□□□□□ -0.26
IRF3-231	ENST00000602190	BET1L	Q9NYM9	111 aa		13.42	□□□□□ -0.26
IRF3-231	ENST00000602190	APLN	Q9ULZ1	77 aa		13.42	□□□□□ -0.26
IRF3-231	ENST00000602190		V9GY05	133 aa		13.42	□□□□□ -0.26
IRF3-231	ENST00000602190	TGOLN2	O43493	480 aa		13.41	□□□□□ -0.26
IRF3-231	ENST00000602190	RAB6A	P20340	208 aa		13.41	□□□□□ -0.26
IRF3-231	ENST00000602190	OR2B8P	P59922	312 aa		13.41	□□□□□ -0.26
IRF3-231	ENST00000602190	RPL8	P62917	257 aa	Known RBP	13.41	□□□□□ -0.26
IRF3-231	ENST00000602190	TMEM203	Q969S6	136 aa		13.41	□□□□□ -0.26
IRF3-231	ENST00000602190	SRSF8	Q9BRL6	282 aa	Known RBP	13.41	□□□□□ -0.26
IRF3-231	ENST00000602190	DCUN1D5	Q9BTE7	237 aa		13.41	□□□□□ -0.26
IRF3-231	ENST00000602190	DAZ1	Q9NQZ3	744 aa	Known RBP	13.41	□□□□□ -0.26
IRF3-231	ENST00000602190	PSMA1	P25786	263 aa	Known RBP	13.4	□□□□□ -0.26
IRF3-231	ENST00000602190	NANOS2	P60321	138 aa	Known RBP	13.4	□□□□□ -0.26
IRF3-231	ENST00000602190	RPS25	P62851	125 aa	Known RBP	13.4	□□□□□ -0.26
IRF3-231	ENST00000602190	TRAM1	Q15629	374 aa		13.4	□□□□□ -0.26
IRF3-231	ENST00000602190	POU2AF1	Q16633	256 aa		13.4	□□□□□ -0.26
IRF3-231	ENST00000602190	OR2B11	Q5JQS5	317 aa		13.4	□□□□□ -0.26
IRF3-231	ENST00000602190	LINC00336	Q6ZUF6	198 aa		13.4	□□□□□ -0.26
IRF3-231	ENST00000602190	GVQW1	Q8N7I0	195 aa		13.4	□□□□□ -0.26
IRF3-231	ENST00000602190	OR4A5	Q8NH83	315 aa		13.4	□□□□□ -0.26
IRF3-231	ENST00000602190	VN1R17P	Q8TDU5	208 aa		13.4	□□□□□ -0.26
IRF3-231	ENST00000602190	UFD1	Q92890	307 aa		13.4	□□□□□ -0.26
IRF3-231	ENST00000602190	OR4C46	A6NHA9	309 aa		13.39	□□□□□ -0.27
IRF3-231	ENST00000602190		F8W735	103 aa	Predicted RBP	13.39	□□□□□ -0.27
IRF3-231	ENST00000602190		K7EMT4	169 aa		13.39	□□□□□ -0.27
IRF3-231	ENST00000602190	CTXN2	P0C2S0	81 aa		13.39	□□□□□ -0.27
IRF3-231	ENST00000602190	MED14OS	P0DP75	135 aa		13.39	□□□□□ -0.27
IRF3-231	ENST00000602190	HLA-G	P17693	338 aa		13.39	□□□□□ -0.27
IRF3-231	ENST00000602190	GADD45A	P24522	165 aa		13.39	□□□□□ -0.27
IRF3-231	ENST00000602190	PSMD7	P51665	324 aa		13.39	□□□□□ -0.27
IRF3-231	ENST00000602190	RBMS2	Q15434	407 aa	Known RBP	13.39	□□□□□ -0.27
IRF3-231	ENST00000602190	TIMM50	Q3ZCQ8	353 aa		13.39	□□□□□ -0.27
IRF3-231	ENST00000602190	PLET1	Q6UQ28	207 aa		13.39	□□□□□ -0.27
IRF3-231	ENST00000602190	ZNF66	Q6ZN08	573 aa		13.39	□□□□□ -0.27
IRF3-231	ENST00000602190	C11orf45	Q8TAV5	145 aa		13.39	□□□□□ -0.27
IRF3-231	ENST00000602190	C2CD4C	Q8TF44	421 aa		13.39	□□□□□ -0.27
IRF3-231	ENST00000602190	ELF5	Q9UKW6	265 aa	Predicted RBP	13.39	□□□□□ -0.27
IRF3-231	ENST00000602190	ABCA13	Q86UQ4	5058 aa		13.39	□□□□□ -0.27
IRF3-231	ENST00000602190	IGHV3-35	A0A0C4DH35	117 aa		13.38	□□□□□ -0.27
IRF3-231	ENST00000602190	HRAS	P01112	189 aa		13.38	□□□□□ -0.27
IRF3-231	ENST00000602190	REG1A	P05451	166 aa		13.38	□□□□□ -0.27
IRF3-231	ENST00000602190	RPL35A	P18077	110 aa	Known RBP	13.38	□□□□□ -0.27
IRF3-231	ENST00000602190	NFYA	P23511	347 aa	Predicted RBP	13.38	□□□□□ -0.27
IRF3-231	ENST00000602190	ADM	P35318	185 aa		13.38	□□□□□ -0.27
IRF3-231	ENST00000602190	FABP5	Q01469	135 aa		13.38	□□□□□ -0.27
IRF3-231	ENST00000602190	MED22	Q15528	200 aa		13.38	□□□□□ -0.27
IRF3-231	ENST00000602190	MSMO1	Q15800	293 aa		13.38	□□□□□ -0.27
IRF3-231	ENST00000602190	LAMTOR1	Q6IAA8	161 aa		13.38	□□□□□ -0.27
IRF3-231	ENST00000602190	MFSD4A	Q8N468	514 aa		13.38	□□□□□ -0.27
IRF3-231	ENST00000602190	RARRES2	Q99969	163 aa		13.38	□□□□□ -0.27
IRF3-231	ENST00000602190	CSTL1	Q9H114	145 aa		13.38	□□□□□ -0.27
IRF3-231	ENST00000602190	ETV7	Q9Y603	341 aa		13.38	□□□□□ -0.27
IRF3-231	ENST00000602190	DNAH11	Q96DT5	4516 aa		13.38	□□□□□ -0.27
IRF3-231	ENST00000602190	DYNC1H1	Q14204	4646 aa	Known RBP	13.38	□□□□□ -0.27
IRF3-231	ENST00000602190	NDUFA4	O00483	81 aa		13.37	□□□□□ -0.27
IRF3-231	ENST00000602190	RBFOX2	O43251	390 aa	Known RBP eCLIP	13.37	□□□□□ -0.27
IRF3-231	ENST00000602190	DEFA4	P12838	97 aa		13.37	□□□□□ -0.27
IRF3-231	ENST00000602190	CALR	P27797	417 aa	Known RBP	13.37	□□□□□ -0.27
IRF3-231	ENST00000602190	HES5	Q5TA89	166 aa		13.37	□□□□□ -0.27
IRF3-231	ENST00000602190	CD300LF	Q8TDQ1	290 aa		13.37	□□□□□ -0.27
IRF3-231	ENST00000602190	BSCL2	Q96G97	398 aa	Predicted RBP	13.37	□□□□□ -0.27
IRF3-231	ENST00000602190	DCSTAMP	Q9H295	470 aa		13.37	□□□□□ -0.27
IRF3-231	ENST00000602190	IFITM5	A6NNB3	132 aa		13.36	□□□□□ -0.27
IRF3-231	ENST00000602190	MPTX1	A8MV57	137 aa		13.36	□□□□□ -0.27
IRF3-231	ENST00000602190	MLLT11	Q13015	90 aa	Predicted RBP	13.36	□□□□□ -0.27
IRF3-231	ENST00000602190	ARL6IP1	Q15041	203 aa		13.36	□□□□□ -0.27
IRF3-231	ENST00000602190	SPSB3	Q6PJ21	355 aa		13.36	□□□□□ -0.27
IRF3-231	ENST00000602190	TCTEX1D2	Q8WW35	142 aa		13.36	□□□□□ -0.27
IRF3-231	ENST00000602190	HRH4	Q9H3N8	390 aa		13.36	□□□□□ -0.27
IRF3-231	ENST00000602190	THYN1	Q9P016	225 aa		13.36	□□□□□ -0.27
IRF3-231	ENST00000602190	TRAV1-2	A0A0B4J238	106 aa		13.35	□□□□□ -0.27
IRF3-231	ENST00000602190	IFNA4	P05014	189 aa		13.35	□□□□□ -0.27
IRF3-231	ENST00000602190	CTSD	P07339	412 aa	Predicted RBP	13.35	□□□□□ -0.27
IRF3-231	ENST00000602190	CNIH2	Q6PI25	160 aa		13.35	□□□□□ -0.27
IRF3-231	ENST00000602190	SSX9	Q7RTT3	188 aa		13.35	□□□□□ -0.27
IRF3-231	ENST00000602190	APRG1	Q8IVJ8	170 aa		13.35	□□□□□ -0.27
IRF3-231	ENST00000602190	GDPD1	Q8N9F7	314 aa		13.35	□□□□□ -0.27
IRF3-231	ENST00000602190	CHRDL1	Q9BU40	450 aa		13.35	□□□□□ -0.27
IRF3-231	ENST00000602190	DUSP21	Q9H596	190 aa		13.35	□□□□□ -0.27
IRF3-231	ENST00000602190	SPATA2	Q9UM82	520 aa		13.35	□□□□□ -0.27
IRF3-231	ENST00000602190	C15orf62	A8K5M9	175 aa		13.34	□□□□□ -0.27
IRF3-231	ENST00000602190		J3QRK9	145 aa		13.34	□□□□□ -0.27
IRF3-231	ENST00000602190	CRHBP	P24387	322 aa		13.34	□□□□□ -0.27
IRF3-231	ENST00000602190	TALDO1	P37837	337 aa		13.34	□□□□□ -0.27
IRF3-231	ENST00000602190	MFAP2	P55001	183 aa		13.34	□□□□□ -0.27
IRF3-231	ENST00000602190	OR10A3	P58181	314 aa		13.34	□□□□□ -0.27
IRF3-231	ENST00000602190	ZNF124	Q15973	351 aa		13.34	□□□□□ -0.27
IRF3-231	ENST00000602190	OGFRL1	Q5TC84	451 aa	Predicted RBP	13.34	□□□□□ -0.27
IRF3-231	ENST00000602190	HACD4	Q5VWC8	232 aa		13.34	□□□□□ -0.27
IRF3-231	ENST00000602190	FAM90A2P	Q658T7	463 aa		13.34	□□□□□ -0.27
IRF3-231	ENST00000602190	THOC7	Q6I9Y2	204 aa	Known RBP	13.34	□□□□□ -0.27
IRF3-231	ENST00000602190	ZNF773	Q6PK81	442 aa		13.34	□□□□□ -0.27
IRF3-231	ENST00000602190	OR11H2	Q8NH07	326 aa		13.34	□□□□□ -0.27
IRF3-231	ENST00000602190	OR5B3	Q8NH48	314 aa		13.34	□□□□□ -0.27
IRF3-231	ENST00000602190	ACOT13	Q9NPJ3	140 aa		13.34	□□□□□ -0.27
IRF3-231	ENST00000602190	FBXL17	Q9UF56	701 aa		13.34	□□□□□ -0.27
IRF3-231	ENST00000602190	PKD1	P98161	4303 aa		13.34	□□□□□ -0.27
IRF3-231	ENST00000602190		A0A075B6Q4	140 aa		13.33	□□□□□ -0.28
IRF3-231	ENST00000602190	TRAV3	A0A0B4J244	114 aa		13.33	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms