RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 SAMD12Q8N8I0 201 aa11.98□□□□□ -0.49
VRK3-221ENST00000600284 EEF1AKMT3Q96AZ1 226 aa11.98□□□□□ -0.49
VRK3-221ENST00000600284 CMTM3Q96MX0 182 aa11.98□□□□□ -0.49
VRK3-221ENST00000600284 CITED4Q96RK1 184 aa11.98□□□□□ -0.49
VRK3-221ENST00000600284 TECRQ9NZ01 308 aaKnown RBP11.98□□□□□ -0.49
VRK3-221ENST00000600284 EHFQ9NZC4 300 aa11.98□□□□□ -0.49
VRK3-221ENST00000600284 COMMD9Q9P000 198 aa11.98□□□□□ -0.49
VRK3-221ENST00000600284 IGLV11-55A0A075B6I3 123 aa11.97□□□□□ -0.49
VRK3-221ENST00000600284 TRBV7-1A0A0A6YYK4 115 aa11.97□□□□□ -0.49
VRK3-221ENST00000600284 MEIS3P1A6NDR6 274 aa11.97□□□□□ -0.49
VRK3-221ENST00000600284 CGB1A6NKQ9 187 aa11.97□□□□□ -0.49
VRK3-221ENST00000600284 PPP5D1E7EU14 171 aa11.97□□□□□ -0.49
VRK3-221ENST00000600284 NDUFB8O95169 186 aa11.97□□□□□ -0.49
VRK3-221ENST00000600284 PRSS3P35030 304 aa11.97□□□□□ -0.49
VRK3-221ENST00000600284 RFX2P48378 723 aa11.97□□□□□ -0.49
VRK3-221ENST00000600284 AADACL3Q5VUY0 350 aa11.97□□□□□ -0.49
VRK3-221ENST00000600284 THOC7Q6I9Y2 204 aaKnown RBP11.97□□□□□ -0.49
VRK3-221ENST00000600284 ADAMTSL5Q6ZMM2 481 aa11.97□□□□□ -0.49
VRK3-221ENST00000600284 TMEM17Q86X19 198 aa11.97□□□□□ -0.49
VRK3-221ENST00000600284 SLC25A46Q96AG3 418 aa11.97□□□□□ -0.49
VRK3-221ENST00000600284 MOB3AQ96BX8 217 aa11.97□□□□□ -0.49
VRK3-221ENST00000600284 CXorf58Q96LI9 332 aa11.97□□□□□ -0.49
VRK3-221ENST00000600284 ZNF2Q9BSG1 426 aaPredicted RBP11.97□□□□□ -0.49
VRK3-221ENST00000600284 COMMD5Q9GZQ3 224 aa11.97□□□□□ -0.49
VRK3-221ENST00000600284 TUBA4BQ9H853 241 aa11.97□□□□□ -0.49
VRK3-221ENST00000600284 IZUMO1RA6ND01 250 aa11.96□□□□□ -0.49
VRK3-221ENST00000600284 C2orf70A6NJV1 201 aa11.96□□□□□ -0.49
VRK3-221ENST00000600284 OR2C1O95371 312 aa11.96□□□□□ -0.49
VRK3-221ENST00000600284 FOLR2P14207 255 aa11.96□□□□□ -0.49
VRK3-221ENST00000600284 ARL3P36405 182 aa11.96□□□□□ -0.49
VRK3-221ENST00000600284 LSM3P62310 102 aaKnown RBP11.96□□□□□ -0.49
VRK3-221ENST00000600284 DEFB114Q30KQ6 69 aa11.96□□□□□ -0.49
VRK3-221ENST00000600284 CD300EQ496F6 205 aaPredicted RBP11.96□□□□□ -0.49
VRK3-221ENST00000600284 FAM106AQ4KMX7 169 aa11.96□□□□□ -0.49
VRK3-221ENST00000600284 CASC10Q5T4H9 136 aa11.96□□□□□ -0.49
VRK3-221ENST00000600284 CLEC19AQ6UXS0 136 aa11.96□□□□□ -0.49
VRK3-221ENST00000600284 C19orf35Q6ZS72 473 aa11.96□□□□□ -0.49
VRK3-221ENST00000600284 HSD17B13Q7Z5P4 300 aaPredicted RBP11.96□□□□□ -0.49
VRK3-221ENST00000600284 CMTM1Q8IZ96 169 aa11.96□□□□□ -0.49
VRK3-221ENST00000600284 DMBX1Q8NFW5 382 aa11.96□□□□□ -0.49
VRK3-221ENST00000600284 OR5H2Q8NGV7 314 aa11.96□□□□□ -0.49
VRK3-221ENST00000600284 OR51H1Q8NH63 302 aa11.96□□□□□ -0.49
VRK3-221ENST00000600284 DYNLRB2Q8TF09 96 aa11.96□□□□□ -0.49
VRK3-221ENST00000600284 CCDC140Q96MF4 163 aa11.96□□□□□ -0.49
VRK3-221ENST00000600284 SPATA25Q9BR10 227 aa11.96□□□□□ -0.49
VRK3-221ENST00000600284 TMEM140Q9NV12 185 aa11.96□□□□□ -0.49
VRK3-221ENST00000600284 SLC2A8Q9NY64 477 aa11.96□□□□□ -0.49
VRK3-221ENST00000600284 THYN1Q9P016 225 aa11.96□□□□□ -0.49
VRK3-221ENST00000600284 TRAV3A0A0B4J244 114 aa11.95□□□□□ -0.5
VRK3-221ENST00000600284 SMIM31A0A1B0GVY4 71 aa11.95□□□□□ -0.5
VRK3-221ENST00000600284 IGLC7A0M8Q6 106 aa11.95□□□□□ -0.5
VRK3-221ENST00000600284 ZNF785A8K8V0 405 aa11.95□□□□□ -0.5
VRK3-221ENST00000600284 CYB5BO43169 146 aa11.95□□□□□ -0.5
VRK3-221ENST00000600284 PGLYRP1O75594 196 aaPredicted RBP11.95□□□□□ -0.5
VRK3-221ENST00000600284 MYOD1P15172 320 aa11.95□□□□□ -0.5
VRK3-221ENST00000600284 F2RP25116 425 aa11.95□□□□□ -0.5
VRK3-221ENST00000600284 HAGHQ16775 308 aa11.95□□□□□ -0.5
VRK3-221ENST00000600284 OR6F1Q8NGZ6 308 aa11.95□□□□□ -0.5
VRK3-221ENST00000600284 ZC4H2Q9NQZ6 224 aa11.95□□□□□ -0.5
VRK3-221ENST00000600284 MARCH11A6NNE9 402 aa11.94□□□□□ -0.5
VRK3-221ENST00000600284 A8MWP6 167 aa11.94□□□□□ -0.5
VRK3-221ENST00000600284 S1PR2O95136 353 aa11.94□□□□□ -0.5
VRK3-221ENST00000600284 HLA-AP01891 365 aaKnown RBP11.94□□□□□ -0.5
VRK3-221ENST00000600284 APOA1P02647 267 aa11.94□□□□□ -0.5
VRK3-221ENST00000600284 PMP2P02689 132 aa11.94□□□□□ -0.5
VRK3-221ENST00000600284 REG1AP05451 166 aa11.94□□□□□ -0.5
VRK3-221ENST00000600284 CLEC3BP05452 202 aa11.94□□□□□ -0.5
VRK3-221ENST00000600284 ERVK-16P61578 105 aa11.94□□□□□ -0.5
VRK3-221ENST00000600284 LPCAT3Q6P1A2 487 aa11.94□□□□□ -0.5
VRK3-221ENST00000600284 LYSMD2Q8IV50 215 aa11.94□□□□□ -0.5
VRK3-221ENST00000600284 DGCR14Q96DF8 476 aaKnown RBP11.94□□□□□ -0.5
VRK3-221ENST00000600284 QTRT1Q9BXR0 403 aaKnown RBP11.94□□□□□ -0.5
VRK3-221ENST00000600284 SCPEP1Q9HB40 452 aa11.94□□□□□ -0.5
VRK3-221ENST00000600284 GPR31O00270 319 aa11.93□□□□□ -0.5
VRK3-221ENST00000600284 TPPPO94811 219 aa11.93□□□□□ -0.5
VRK3-221ENST00000600284 IGHV3-23P01764 117 aa11.93□□□□□ -0.5
VRK3-221ENST00000600284 RLN1P04808 185 aa11.93□□□□□ -0.5
VRK3-221ENST00000600284 TRAPPC2P0DI81 140 aa11.93□□□□□ -0.5
VRK3-221ENST00000600284 TRAPPC2BP0DI82 140 aa11.93□□□□□ -0.5
VRK3-221ENST00000600284 LYL1P12980 280 aa11.93□□□□□ -0.5
VRK3-221ENST00000600284 CBLN1P23435 193 aa11.93□□□□□ -0.5
VRK3-221ENST00000600284 PTBP1P26599 531 aaKnown RBP eCLIP11.93□□□□□ -0.5
VRK3-221ENST00000600284 CD81P60033 236 aa11.93□□□□□ -0.5
VRK3-221ENST00000600284 LINC00322Q6ZN03 302 aaPredicted RBP11.93□□□□□ -0.5
VRK3-221ENST00000600284 OR1L8Q8NGR8 309 aa11.93□□□□□ -0.5
VRK3-221ENST00000600284 GPX8Q8TED1 209 aa11.93□□□□□ -0.5
VRK3-221ENST00000600284 NEURL2Q9BR09 285 aa11.93□□□□□ -0.5
VRK3-221ENST00000600284 FUNDC2Q9BWH2 189 aa11.93□□□□□ -0.5
VRK3-221ENST00000600284 EDA2RQ9HAV5 297 aa11.93□□□□□ -0.5
VRK3-221ENST00000600284 FAM212BQ9NTI7 297 aaPredicted RBP11.93□□□□□ -0.5
VRK3-221ENST00000600284 TEX50A0A1B0GTY4 177 aa11.92□□□□□ -0.5
VRK3-221ENST00000600284 MFSD2BA6NFX1 497 aa11.92□□□□□ -0.5
VRK3-221ENST00000600284 IFNA6P05013 189 aa11.92□□□□□ -0.5
VRK3-221ENST00000600284 EIF4EP06730 217 aaKnown RBP11.92□□□□□ -0.5
VRK3-221ENST00000600284 S100GP29377 79 aa11.92□□□□□ -0.5
VRK3-221ENST00000600284 HRH1P35367 487 aa11.92□□□□□ -0.5
VRK3-221ENST00000600284 LPAR6P43657 344 aa11.92□□□□□ -0.5
VRK3-221ENST00000600284 GDPD1Q8N9F7 314 aa11.92□□□□□ -0.5
VRK3-221ENST00000600284 ZNF502Q8TBZ5 544 aa11.92□□□□□ -0.5
VRK3-221ENST00000600284 VN1R17PQ8TDU5 208 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms