RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 OR2K2Q8NGT1 345 aa17.82■□□□□ 0.44
LSM4-204ENST00000594828 MOB3AQ96BX8 217 aa17.82■□□□□ 0.44
LSM4-204ENST00000594828 FUNDC2Q9BWH2 189 aa17.82■□□□□ 0.44
LSM4-204ENST00000594828 COMMD5Q9GZQ3 224 aa17.82■□□□□ 0.44
LSM4-204ENST00000594828 COMMD3Q9UBI1 195 aa17.82■□□□□ 0.44
LSM4-204ENST00000594828 TENM3Q9P273 2699 aa17.82■□□□□ 0.44
LSM4-204ENST00000594828 TRAV3A0A0B4J244 114 aa17.81■□□□□ 0.44
LSM4-204ENST00000594828 IZUMO1RA6ND01 250 aa17.81■□□□□ 0.44
LSM4-204ENST00000594828 C3orf84H3BNL1 204 aa17.81■□□□□ 0.44
LSM4-204ENST00000594828 OR2C1O95371 312 aa17.81■□□□□ 0.44
LSM4-204ENST00000594828 IGHV3-23P01764 117 aa17.81■□□□□ 0.44
LSM4-204ENST00000594828 HLA-AP01891 365 aaKnown RBP17.81■□□□□ 0.44
LSM4-204ENST00000594828 EIF4EP06730 217 aaKnown RBP17.81■□□□□ 0.44
LSM4-204ENST00000594828 OR2B8PP59922 312 aa17.81■□□□□ 0.44
LSM4-204ENST00000594828 KLK9Q2XQG4 91 aa17.81■□□□□ 0.44
LSM4-204ENST00000594828 CLEC19AQ6UXS0 136 aa17.81■□□□□ 0.44
LSM4-204ENST00000594828 OR6F1Q8NGZ6 308 aa17.81■□□□□ 0.44
LSM4-204ENST00000594828 THAP7Q9BT49 309 aaPredicted RBP17.81■□□□□ 0.44
LSM4-204ENST00000594828 TMEM140Q9NV12 185 aa17.81■□□□□ 0.44
LSM4-204ENST00000594828 KLK9Q9UKQ9 250 aa17.81■□□□□ 0.44
LSM4-204ENST00000594828 S4R3C0 116 aa17.81■□□□□ 0.44
LSM4-204ENST00000594828 SMIM31A0A1B0GVY4 71 aa17.8■□□□□ 0.44
LSM4-204ENST00000594828 PGLYRP1O75594 196 aaPredicted RBP17.8■□□□□ 0.44
LSM4-204ENST00000594828 S1PR2O95136 353 aa17.8■□□□□ 0.44
LSM4-204ENST00000594828 ADAMTSL5Q6ZMM2 481 aa17.8■□□□□ 0.44
LSM4-204ENST00000594828 LYSMD2Q8IV50 215 aa17.8■□□□□ 0.44
LSM4-204ENST00000594828 EEF1AKMT3Q96AZ1 226 aa17.8■□□□□ 0.44
LSM4-204ENST00000594828 CMTM3Q96MX0 182 aa17.8■□□□□ 0.44
LSM4-204ENST00000594828 TM2D3Q9BRN9 247 aa17.8■□□□□ 0.44
LSM4-204ENST00000594828 COMMD9Q9P000 198 aa17.8■□□□□ 0.44
LSM4-204ENST00000594828 HUWE1Q7Z6Z7 4374 aaKnown RBP17.79■□□□□ 0.44
LSM4-204ENST00000594828 APOA1P02647 267 aa17.79■□□□□ 0.44
LSM4-204ENST00000594828 RLN1P04808 185 aa17.79■□□□□ 0.44
LSM4-204ENST00000594828 RPA2P15927 270 aa17.79■□□□□ 0.44
LSM4-204ENST00000594828 ARL3P36405 182 aa17.79■□□□□ 0.44
LSM4-204ENST00000594828 VBP1P61758 197 aa17.79■□□□□ 0.44
LSM4-204ENST00000594828 GPHB5Q86YW7 130 aa17.79■□□□□ 0.44
LSM4-204ENST00000594828 CMTM1Q8IZ96 169 aa17.79■□□□□ 0.44
LSM4-204ENST00000594828 CCDC140Q96MF4 163 aa17.79■□□□□ 0.44
LSM4-204ENST00000594828 KMT2CQ8NEZ4 4911 aaKnown RBP17.79■□□□□ 0.44
LSM4-204ENST00000594828 IGLV11-55A0A075B6I3 123 aa17.78■□□□□ 0.44
LSM4-204ENST00000594828 LGALS9O00182 355 aa17.78■□□□□ 0.44
LSM4-204ENST00000594828 FGF2P09038 288 aa17.78■□□□□ 0.44
LSM4-204ENST00000594828 F2RP25116 425 aa17.78■□□□□ 0.44
LSM4-204ENST00000594828 HLA-DMAP28067 261 aa17.78■□□□□ 0.44
LSM4-204ENST00000594828 ERVK-16P61578 105 aa17.78■□□□□ 0.44
LSM4-204ENST00000594828 CD300EQ496F6 205 aaPredicted RBP17.78■□□□□ 0.44
LSM4-204ENST00000594828 GPX8Q8TED1 209 aa17.78■□□□□ 0.44
LSM4-204ENST00000594828 DYNLRB2Q8TF09 96 aa17.78■□□□□ 0.44
LSM4-204ENST00000594828 SRSF8Q9BRL6 282 aaKnown RBP17.78■□□□□ 0.44
LSM4-204ENST00000594828 TUBA4BQ9H853 241 aa17.78■□□□□ 0.44
LSM4-204ENST00000594828 IGLC7A0M8Q6 106 aa17.77■□□□□ 0.44
LSM4-204ENST00000594828 C2orf70A6NJV1 201 aa17.77■□□□□ 0.44
LSM4-204ENST00000594828 FOLR2P14207 255 aa17.77■□□□□ 0.44
LSM4-204ENST00000594828 HRH1P35367 487 aa17.77■□□□□ 0.44
LSM4-204ENST00000594828 DEFB114Q30KQ6 69 aa17.77■□□□□ 0.44
LSM4-204ENST00000594828 DGCR14Q96DF8 476 aaKnown RBP17.77■□□□□ 0.44
LSM4-204ENST00000594828 CXorf58Q96LI9 332 aa17.77■□□□□ 0.44
LSM4-204ENST00000594828 QTRT1Q9BXR0 403 aaKnown RBP17.77■□□□□ 0.44
LSM4-204ENST00000594828 TRBV7-1A0A0A6YYK4 115 aa17.76■□□□□ 0.43
LSM4-204ENST00000594828 MARCH11A6NNE9 402 aa17.76■□□□□ 0.43
LSM4-204ENST00000594828 GPR31O00270 319 aa17.76■□□□□ 0.43
LSM4-204ENST00000594828 LPAR6P43657 344 aa17.76■□□□□ 0.43
LSM4-204ENST00000594828 FAM106AQ4KMX7 169 aa17.76■□□□□ 0.43
LSM4-204ENST00000594828 MUC7Q8TAX7 377 aa17.76■□□□□ 0.43
LSM4-204ENST00000594828 FCAMRQ8WWV6 532 aa17.76■□□□□ 0.43
LSM4-204ENST00000594828 FXYD6Q9H0Q3 95 aa17.76■□□□□ 0.43
LSM4-204ENST00000594828 SCPEP1Q9HB40 452 aa17.76■□□□□ 0.43
LSM4-204ENST00000594828 THYN1Q9P016 225 aa17.76■□□□□ 0.43
LSM4-204ENST00000594828 CLEC3BP05452 202 aa17.75■□□□□ 0.43
LSM4-204ENST00000594828 TRAPPC2P0DI81 140 aa17.75■□□□□ 0.43
LSM4-204ENST00000594828 TRAPPC2BP0DI82 140 aa17.75■□□□□ 0.43
LSM4-204ENST00000594828 EDN2P20800 178 aa17.75■□□□□ 0.43
LSM4-204ENST00000594828 RORCP51449 518 aa17.75■□□□□ 0.43
LSM4-204ENST00000594828 TSPAN5P62079 268 aa17.75■□□□□ 0.43
LSM4-204ENST00000594828 THOC7Q6I9Y2 204 aaKnown RBP17.75■□□□□ 0.43
LSM4-204ENST00000594828 SNX29P2Q8IUI4 249 aa17.75■□□□□ 0.43
LSM4-204ENST00000594828 LAX1Q8IWV1 398 aa17.75■□□□□ 0.43
LSM4-204ENST00000594828 OR10W1Q8NGF6 305 aa17.75■□□□□ 0.43
LSM4-204ENST00000594828 TECRQ9NZ01 308 aaKnown RBP17.75■□□□□ 0.43
LSM4-204ENST00000594828 TEX50A0A1B0GTY4 177 aa17.74■□□□□ 0.43
LSM4-204ENST00000594828 ZNF320A2RRD8 509 aa17.74■□□□□ 0.43
LSM4-204ENST00000594828 MFSD2BA6NFX1 497 aa17.74■□□□□ 0.43
LSM4-204ENST00000594828 ZNF785A8K8V0 405 aa17.74■□□□□ 0.43
LSM4-204ENST00000594828 HPGDSO60760 199 aa17.74■□□□□ 0.43
LSM4-204ENST00000594828 KRASP01116 189 aa17.74■□□□□ 0.43
LSM4-204ENST00000594828 ELK1P19419 428 aa17.74■□□□□ 0.43
LSM4-204ENST00000594828 CBLN1P23435 193 aa17.74■□□□□ 0.43
LSM4-204ENST00000594828 CD81P60033 236 aa17.74■□□□□ 0.43
LSM4-204ENST00000594828 HAGHQ16775 308 aa17.74■□□□□ 0.43
LSM4-204ENST00000594828 LPCAT3Q6P1A2 487 aa17.74■□□□□ 0.43
LSM4-204ENST00000594828 OR1L8Q8NGR8 309 aa17.74■□□□□ 0.43
LSM4-204ENST00000594828 SLC2A8Q9NY64 477 aa17.74■□□□□ 0.43
LSM4-204ENST00000594828 CYB5BO43169 146 aa17.73■□□□□ 0.43
LSM4-204ENST00000594828 ZNF585BQ52M93 769 aa17.73■□□□□ 0.43
LSM4-204ENST00000594828 HSD17B13Q7Z5P4 300 aaPredicted RBP17.73■□□□□ 0.43
LSM4-204ENST00000594828 CADM3Q8N126 398 aa17.73■□□□□ 0.43
LSM4-204ENST00000594828 NEURL2Q9BR09 285 aa17.73■□□□□ 0.43
LSM4-204ENST00000594828 NBEAL2Q6ZNJ1 2754 aa17.72■□□□□ 0.43
LSM4-204ENST00000594828 SNAPC5O75971 98 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms