RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 TIMM50Q3ZCQ8 353 aa16.97■□□□□ 0.31
SSBP4-203ENST00000593641 TPRA1Q86W33 373 aa16.97■□□□□ 0.31
SSBP4-203ENST00000593641 LGALS14Q8TCE9 139 aa16.97■□□□□ 0.31
SSBP4-203ENST00000593641 TXNL4BQ9NX01 149 aaKnown RBP16.97■□□□□ 0.31
SSBP4-203ENST00000593641 KLK9Q9UKQ9 250 aa16.97■□□□□ 0.31
SSBP4-203ENST00000593641 MFSD2BA6NFX1 497 aa16.96■□□□□ 0.31
SSBP4-203ENST00000593641 CLEC3BP05452 202 aa16.96■□□□□ 0.31
SSBP4-203ENST00000593641 MYOD1P15172 320 aa16.96■□□□□ 0.31
SSBP4-203ENST00000593641 FGF9P31371 208 aaPredicted RBP16.96■□□□□ 0.31
SSBP4-203ENST00000593641 GABARAPL2P60520 117 aa16.96■□□□□ 0.31
SSBP4-203ENST00000593641 MSMO1Q15800 293 aa16.96■□□□□ 0.31
SSBP4-203ENST00000593641 RBPMS2Q6ZRY4 209 aaKnown RBP16.96■□□□□ 0.31
SSBP4-203ENST00000593641 SPAG16Q8N0X2 631 aa16.96■□□□□ 0.31
SSBP4-203ENST00000593641 OR13F1Q8NGS4 319 aa16.96■□□□□ 0.31
SSBP4-203ENST00000593641 MARC2Q969Z3 335 aa16.96■□□□□ 0.31
SSBP4-203ENST00000593641 RHBDL2Q9NX52 303 aa16.96■□□□□ 0.31
SSBP4-203ENST00000593641 RRP15Q9Y3B9 282 aaKnown RBP16.96■□□□□ 0.31
SSBP4-203ENST00000593641 PSMB9P28065 219 aa16.95■□□□□ 0.3
SSBP4-203ENST00000593641 FCGR2CP31995 323 aa16.95■□□□□ 0.3
SSBP4-203ENST00000593641 CATR1Q13166 79 aa16.95■□□□□ 0.3
SSBP4-203ENST00000593641 TM4SF20Q53R12 229 aa16.95■□□□□ 0.3
SSBP4-203ENST00000593641 SFXN4Q6P4A7 337 aa16.95■□□□□ 0.3
SSBP4-203ENST00000593641 BEST4Q8NFU0 473 aa16.95■□□□□ 0.3
SSBP4-203ENST00000593641 CCL28Q9NRJ3 127 aa16.95■□□□□ 0.3
SSBP4-203ENST00000593641 THYN1Q9P016 225 aa16.95■□□□□ 0.3
SSBP4-203ENST00000593641 TRAV25A0A0B4J276 109 aa16.94■□□□□ 0.3
SSBP4-203ENST00000593641 MRPS14O60783 128 aaKnown RBP16.94■□□□□ 0.3
SSBP4-203ENST00000593641 GPR183P32249 361 aa16.94■□□□□ 0.3
SSBP4-203ENST00000593641 UNQ9165/PRO28630Q6UXU0 137 aa16.94■□□□□ 0.3
SSBP4-203ENST00000593641 ZBTB34Q8NCN2 500 aa16.94■□□□□ 0.3
SSBP4-203ENST00000593641 OR1L6Q8NGR2 347 aa16.94■□□□□ 0.3
SSBP4-203ENST00000593641 OVOL2Q9BRP0 275 aa16.94■□□□□ 0.3
SSBP4-203ENST00000593641 UFC1Q9Y3C8 167 aa16.94■□□□□ 0.3
SSBP4-203ENST00000593641 CGB1A6NKQ9 187 aa16.93■□□□□ 0.3
SSBP4-203ENST00000593641 RBFOX2O43251 390 aaKnown RBP eCLIP16.93■□□□□ 0.35e-6■■■■□ 20.6
SSBP4-203ENST00000593641 PPYP01298 95 aa16.93■□□□□ 0.3
SSBP4-203ENST00000593641 TAS2R31P59538 309 aa16.93■□□□□ 0.3
SSBP4-203ENST00000593641 OR2B8PP59922 312 aa16.93■□□□□ 0.3
SSBP4-203ENST00000593641 ZNF585BQ52M93 769 aa16.93■□□□□ 0.3
SSBP4-203ENST00000593641 UBE2UQ5VVX9 321 aa16.93■□□□□ 0.3
SSBP4-203ENST00000593641 PLET1Q6UQ28 207 aa16.93■□□□□ 0.3
SSBP4-203ENST00000593641 COMMD5Q9GZQ3 224 aa16.93■□□□□ 0.3
SSBP4-203ENST00000593641 MRPL27Q9P0M9 148 aaKnown RBP16.93■□□□□ 0.3
SSBP4-203ENST00000593641 SSR3Q9UNL2 185 aa16.93■□□□□ 0.3
SSBP4-203ENST00000593641 SULT1C2O00338 296 aa16.92■□□□□ 0.3
SSBP4-203ENST00000593641 CYB5BO43169 146 aa16.92■□□□□ 0.3
SSBP4-203ENST00000593641 NQO2P16083 231 aa16.92■□□□□ 0.3
SSBP4-203ENST00000593641 ZNF502Q8TBZ5 544 aa16.92■□□□□ 0.3
SSBP4-203ENST00000593641 FCGR1BQ92637 280 aa16.92■□□□□ 0.3
SSBP4-203ENST00000593641 SRSF8Q9BRL6 282 aaKnown RBP16.92■□□□□ 0.3
SSBP4-203ENST00000593641 SLC5A7Q9GZV3 580 aa16.92■□□□□ 0.3
SSBP4-203ENST00000593641 RAB26Q9ULW5 256 aa16.92■□□□□ 0.3
SSBP4-203ENST00000593641 IGLC7A0M8Q6 106 aa16.91■□□□□ 0.3
SSBP4-203ENST00000593641 CXorf65A6NEN9 183 aa16.91■□□□□ 0.3
SSBP4-203ENST00000593641 HPRT1P00492 218 aa16.91■□□□□ 0.3
SSBP4-203ENST00000593641 C8orf88P0DMB2 117 aa16.91■□□□□ 0.3
SSBP4-203ENST00000593641 PTHLHP12272 177 aa16.91■□□□□ 0.3
SSBP4-203ENST00000593641 ELLP55199 621 aaPredicted RBP16.91■□□□□ 0.3
SSBP4-203ENST00000593641 FXYD4P59646 89 aa16.91■□□□□ 0.3
SSBP4-203ENST00000593641 HOGA1Q86XE5 327 aa16.91■□□□□ 0.3
SSBP4-203ENST00000593641 SLC38A6Q8IZM9 456 aa16.91■□□□□ 0.3
SSBP4-203ENST00000593641 GVQW1Q8N7I0 195 aa16.91■□□□□ 0.3
SSBP4-203ENST00000593641 LINC00476Q8WZB0 136 aa16.91■□□□□ 0.3
SSBP4-203ENST00000593641 TRAV18A0A075B6X5 111 aa16.9■□□□□ 0.3
SSBP4-203ENST00000593641 IGHV3-35A0A0C4DH35 117 aa16.9■□□□□ 0.3
SSBP4-203ENST00000593641 UPK2O00526 184 aa16.9■□□□□ 0.3
SSBP4-203ENST00000593641 PTBP1P26599 531 aaKnown RBP eCLIP16.9■□□□□ 0.3
SSBP4-203ENST00000593641 APOC4P55056 127 aa16.9■□□□□ 0.3
SSBP4-203ENST00000593641 SCAND1P57086 179 aa16.9■□□□□ 0.3
SSBP4-203ENST00000593641 PMS2P11Q13670 270 aa16.9■□□□□ 0.3
SSBP4-203ENST00000593641 POU2AF1Q16633 256 aa16.9■□□□□ 0.3
SSBP4-203ENST00000593641 OR2C3Q8N628 320 aa16.9■□□□□ 0.3
SSBP4-203ENST00000593641 DMBX1Q8NFW5 382 aa16.9■□□□□ 0.3
SSBP4-203ENST00000593641 SPAG8Q99932 426 aaPredicted RBP16.9■□□□□ 0.3
SSBP4-203ENST00000593641 QTRT1Q9BXR0 403 aaKnown RBP16.9■□□□□ 0.3
SSBP4-203ENST00000593641 TMEM140Q9NV12 185 aa16.9■□□□□ 0.3
SSBP4-203ENST00000593641 ETV7Q9Y603 341 aa16.9■□□□□ 0.3
SSBP4-203ENST00000593641 TRAV3A0A0B4J244 114 aa16.89■□□□□ 0.29
SSBP4-203ENST00000593641 SDC2P34741 201 aa16.89■□□□□ 0.29
SSBP4-203ENST00000593641 MXD1Q05195 221 aa16.89■□□□□ 0.29
SSBP4-203ENST00000593641 THOC7Q6I9Y2 204 aaKnown RBP16.89■□□□□ 0.29
SSBP4-203ENST00000593641 SPARTQ8N0X7 666 aa16.89■□□□□ 0.29
SSBP4-203ENST00000593641 OR51H1Q8NH63 302 aa16.89■□□□□ 0.29
SSBP4-203ENST00000593641 CD300LFQ8TDQ1 290 aa16.89■□□□□ 0.29
SSBP4-203ENST00000593641 C5orf66Q9H5L9 145 aa16.89■□□□□ 0.29
SSBP4-203ENST00000593641 A0A0A6YYH2 397 aa16.88■□□□□ 0.29
SSBP4-203ENST00000593641 NUPR2A6NF83 97 aa16.88■□□□□ 0.29
SSBP4-203ENST00000593641 A6NJ64 397 aa16.88■□□□□ 0.29
SSBP4-203ENST00000593641 TGOLN2O43493 480 aa16.88■□□□□ 0.29
SSBP4-203ENST00000593641 FGF2P09038 288 aa16.88■□□□□ 0.29
SSBP4-203ENST00000593641 AADACL3Q5VUY0 350 aa16.88■□□□□ 0.29
SSBP4-203ENST00000593641 VN1R17PQ8TDU5 208 aa16.88■□□□□ 0.29
SSBP4-203ENST00000593641 TMEM190Q8WZ59 177 aa16.88■□□□□ 0.29
SSBP4-203ENST00000593641 ZNF436Q9C0F3 470 aaPredicted RBP16.88■□□□□ 0.29
SSBP4-203ENST00000593641 PLEKHA2Q9HB19 425 aa16.88■□□□□ 0.29
SSBP4-203ENST00000593641 TP53TG1Q9Y2A0 90 aa16.88■□□□□ 0.29
SSBP4-203ENST00000593641 A0A0J9YWU9 116 aa16.87■□□□□ 0.29
SSBP4-203ENST00000593641 LY6G6CO95867 125 aa16.87■□□□□ 0.29
SSBP4-203ENST00000593641 FCER2P06734 321 aa16.87■□□□□ 0.29
SSBP4-203ENST00000593641 BMI1P35226 326 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms