RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	ODF3L2	Q3SX64	289 aa		13.53	□□□□□ -0.24
CIRBP-238	ENST00000592412	SSX9	Q7RTT3	188 aa		13.53	□□□□□ -0.24
CIRBP-238	ENST00000592412	OR2C3	Q8N628	320 aa		13.53	□□□□□ -0.24
CIRBP-238	ENST00000592412	ZNF502	Q8TBZ5	544 aa		13.53	□□□□□ -0.24
CIRBP-238	ENST00000592412	TCTEX1D2	Q8WW35	142 aa		13.53	□□□□□ -0.24
CIRBP-238	ENST00000592412	MARC2	Q969Z3	335 aa		13.53	□□□□□ -0.24
CIRBP-238	ENST00000592412	RNF183	Q96D59	192 aa		13.53	□□□□□ -0.24
CIRBP-238	ENST00000592412	CENPO	Q9BU64	300 aa		13.53	□□□□□ -0.24
CIRBP-238	ENST00000592412	YTHDF1	Q9BYJ9	559 aa	Known RBP	13.53	□□□□□ -0.24
CIRBP-238	ENST00000592412	MRPL27	Q9P0M9	148 aa	Known RBP	13.53	□□□□□ -0.24
CIRBP-238	ENST00000592412	SPATA2	Q9UM82	520 aa		13.53	□□□□□ -0.24
CIRBP-238	ENST00000592412	PKHD1	P08F94	4074 aa		13.52	□□□□□ -0.24
CIRBP-238	ENST00000592412	TRBV7-1	A0A0A6YYK4	115 aa		13.52	□□□□□ -0.25
CIRBP-238	ENST00000592412	MRPS14	O60783	128 aa	Known RBP	13.52	□□□□□ -0.25
CIRBP-238	ENST00000592412	HIST1H1B	P16401	226 aa	Known RBP	13.52	□□□□□ -0.25
CIRBP-238	ENST00000592412	GAL	P22466	123 aa		13.52	□□□□□ -0.25
CIRBP-238	ENST00000592412	APOC4	P55056	127 aa		13.52	□□□□□ -0.25
CIRBP-238	ENST00000592412	RPL8	P62917	257 aa	Known RBP	13.52	□□□□□ -0.25
CIRBP-238	ENST00000592412	SSX1	Q16384	188 aa		13.52	□□□□□ -0.25
CIRBP-238	ENST00000592412	RBPMS2	Q6ZRY4	209 aa	Known RBP	13.52	□□□□□ -0.25
CIRBP-238	ENST00000592412	ZNF367	Q7RTV3	350 aa		13.52	□□□□□ -0.25
CIRBP-238	ENST00000592412	MFSD4A	Q8N468	514 aa		13.52	□□□□□ -0.25
CIRBP-238	ENST00000592412	MGLL	Q99685	303 aa		13.52	□□□□□ -0.25
CIRBP-238	ENST00000592412	HSD17B10	Q99714	261 aa	Known RBP	13.52	□□□□□ -0.25
CIRBP-238	ENST00000592412	ZNF436	Q9C0F3	470 aa	Predicted RBP	13.52	□□□□□ -0.25
CIRBP-238	ENST00000592412	ACOT13	Q9NPJ3	140 aa		13.52	□□□□□ -0.25
CIRBP-238	ENST00000592412	TAS2R8	Q9NYW2	309 aa		13.52	□□□□□ -0.25
CIRBP-238	ENST00000592412	TRAV1-2	A0A0B4J238	106 aa		13.51	□□□□□ -0.25
CIRBP-238	ENST00000592412	IGLC7	A0M8Q6	106 aa		13.51	□□□□□ -0.25
CIRBP-238	ENST00000592412	SLC22A5	O76082	557 aa		13.51	□□□□□ -0.25
CIRBP-238	ENST00000592412	DHFR	P00374	187 aa		13.51	□□□□□ -0.25
CIRBP-238	ENST00000592412	RANBP1	P43487	201 aa		13.51	□□□□□ -0.25
CIRBP-238	ENST00000592412	ELL	P55199	621 aa	Predicted RBP	13.51	□□□□□ -0.25
CIRBP-238	ENST00000592412	CDNF	Q49AH0	187 aa		13.51	□□□□□ -0.25
CIRBP-238	ENST00000592412	SPAG8	Q99932	426 aa	Predicted RBP	13.51	□□□□□ -0.25
CIRBP-238	ENST00000592412	C5orf66	Q9H5L9	145 aa		13.51	□□□□□ -0.25
CIRBP-238	ENST00000592412	KLK5	Q9Y337	293 aa	Predicted RBP	13.51	□□□□□ -0.25
CIRBP-238	ENST00000592412	TSPAN4	O14817	238 aa		13.5	□□□□□ -0.25
CIRBP-238	ENST00000592412	CTXN2	P0C2S0	81 aa		13.5	□□□□□ -0.25
CIRBP-238	ENST00000592412	HLA-G	P17693	338 aa		13.5	□□□□□ -0.25
CIRBP-238	ENST00000592412	OR2B8P	P59922	312 aa		13.5	□□□□□ -0.25
CIRBP-238	ENST00000592412	TIMM50	Q3ZCQ8	353 aa		13.5	□□□□□ -0.25
CIRBP-238	ENST00000592412	HACD4	Q5VWC8	232 aa		13.5	□□□□□ -0.25
CIRBP-238	ENST00000592412	LGALS9C	Q6DKI2	356 aa		13.5	□□□□□ -0.25
CIRBP-238	ENST00000592412	PHLDA1	Q8WV24	401 aa	Predicted RBP	13.5	□□□□□ -0.25
CIRBP-238	ENST00000592412	NUDCD2	Q8WVJ2	157 aa		13.5	□□□□□ -0.25
CIRBP-238	ENST00000592412	TMEM190	Q8WZ59	177 aa		13.5	□□□□□ -0.25
CIRBP-238	ENST00000592412	CXorf58	Q96LI9	332 aa		13.5	□□□□□ -0.25
CIRBP-238	ENST00000592412	ATG5	Q9H1Y0	275 aa		13.5	□□□□□ -0.25
CIRBP-238	ENST00000592412	UFC1	Q9Y3C8	167 aa		13.5	□□□□□ -0.25
CIRBP-238	ENST00000592412	TRAV3	A0A0B4J244	114 aa		13.49	□□□□□ -0.25
CIRBP-238	ENST00000592412	KIR2DL5B	A0A0G2JN68	375 aa		13.49	□□□□□ -0.25
CIRBP-238	ENST00000592412	KIR2DL5B	A0A0G2JPC4	375 aa		13.49	□□□□□ -0.25
CIRBP-238	ENST00000592412	METTL21EP	A6NDL7	271 aa		13.49	□□□□□ -0.25
CIRBP-238	ENST00000592412	UBE2C	O00762	179 aa		13.49	□□□□□ -0.25
CIRBP-238	ENST00000592412	PDCD5	O14737	125 aa		13.49	□□□□□ -0.25
CIRBP-238	ENST00000592412	SSX5	O60225	188 aa		13.49	□□□□□ -0.25
CIRBP-238	ENST00000592412	DEFA4	P12838	97 aa		13.49	□□□□□ -0.25
CIRBP-238	ENST00000592412	CNIH2	Q6PI25	160 aa		13.49	□□□□□ -0.25
CIRBP-238	ENST00000592412	SLC38A6	Q8IZM9	456 aa		13.49	□□□□□ -0.25
CIRBP-238	ENST00000592412	KIR2DL5A	Q8N109	375 aa		13.49	□□□□□ -0.25
CIRBP-238	ENST00000592412	KIR2DL5B	Q8NHK3	375 aa		13.49	□□□□□ -0.25
CIRBP-238	ENST00000592412	DCSTAMP	Q9H295	470 aa		13.49	□□□□□ -0.25
CIRBP-238	ENST00000592412	BET1L	Q9NYM9	111 aa		13.49	□□□□□ -0.25
CIRBP-238	ENST00000592412	TMEM235	A6NFC5	223 aa		13.48	□□□□□ -0.25
CIRBP-238	ENST00000592412	PTBP1	P26599	531 aa	Known RBP eCLIP	13.48	□□□□□ -0.25
CIRBP-238	ENST00000592412	FCGR2B	P31994	310 aa	Predicted RBP	13.48	□□□□□ -0.25
CIRBP-238	ENST00000592412	ZNF773	Q6PK81	442 aa		13.48	□□□□□ -0.25
CIRBP-238	ENST00000592412	PLET1	Q6UQ28	207 aa		13.48	□□□□□ -0.25
CIRBP-238	ENST00000592412	ZNF66	Q6ZN08	573 aa		13.48	□□□□□ -0.25
CIRBP-238	ENST00000592412	SPART	Q8N0X7	666 aa		13.48	□□□□□ -0.25
CIRBP-238	ENST00000592412	TGOLN2	O43493	480 aa		13.47	□□□□□ -0.25
CIRBP-238	ENST00000592412	TNFSF12	O43508	249 aa		13.47	□□□□□ -0.25
CIRBP-238	ENST00000592412	HRAS	P01112	189 aa		13.47	□□□□□ -0.25
CIRBP-238	ENST00000592412	RPA2	P15927	270 aa		13.47	□□□□□ -0.25
CIRBP-238	ENST00000592412	RPL35A	P18077	110 aa	Known RBP	13.47	□□□□□ -0.25
CIRBP-238	ENST00000592412	RAB3B	P20337	219 aa		13.47	□□□□□ -0.25
CIRBP-238	ENST00000592412	PRR20E	P86478	221 aa		13.47	□□□□□ -0.25
CIRBP-238	ENST00000592412	PRR20C	P86479	221 aa		13.47	□□□□□ -0.25
CIRBP-238	ENST00000592412	PRR20D	P86480	221 aa		13.47	□□□□□ -0.25
CIRBP-238	ENST00000592412	PRR20B	P86481	221 aa		13.47	□□□□□ -0.25
CIRBP-238	ENST00000592412	PRR20A	P86496	221 aa		13.47	□□□□□ -0.25
CIRBP-238	ENST00000592412	STPG3	Q8N7X2	389 aa		13.47	□□□□□ -0.25
CIRBP-238	ENST00000592412	ZNF414	Q96IQ9	312 aa		13.47	□□□□□ -0.25
CIRBP-238	ENST00000592412	ANXA10	Q9UJ72	324 aa		13.47	□□□□□ -0.25
CIRBP-238	ENST00000592412	DYNC1H1	Q14204	4646 aa	Known RBP	13.47	□□□□□ -0.25
CIRBP-238	ENST00000592412	SMIM30	A4D0T7	59 aa		13.46	□□□□□ -0.25
CIRBP-238	ENST00000592412	PTHLH	P12272	177 aa		13.46	□□□□□ -0.25
CIRBP-238	ENST00000592412	PSMB9	P28065	219 aa		13.46	□□□□□ -0.25
CIRBP-238	ENST00000592412	ARL6IP1	Q15041	203 aa		13.46	□□□□□ -0.25
CIRBP-238	ENST00000592412	UBE2U	Q5VVX9	321 aa		13.46	□□□□□ -0.25
CIRBP-238	ENST00000592412	OR10W1	Q8NGF6	305 aa		13.46	□□□□□ -0.25
CIRBP-238	ENST00000592412	OR4A5	Q8NH83	315 aa		13.46	□□□□□ -0.25
CIRBP-238	ENST00000592412	FCGR1B	Q92637	280 aa		13.46	□□□□□ -0.25
CIRBP-238	ENST00000592412	MAP6D1	Q9H9H5	199 aa		13.46	□□□□□ -0.25
CIRBP-238	ENST00000592412	CCL28	Q9NRJ3	127 aa		13.46	□□□□□ -0.25
CIRBP-238	ENST00000592412	OR2T8	A6NH00	312 aa		13.45	□□□□□ -0.26
CIRBP-238	ENST00000592412		F8W735	103 aa	Predicted RBP	13.45	□□□□□ -0.26
CIRBP-238	ENST00000592412	UPK2	O00526	184 aa		13.45	□□□□□ -0.26
CIRBP-238	ENST00000592412	ZNF124	Q15973	351 aa		13.45	□□□□□ -0.26

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