RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 OR4A5Q8NH83 315 aa14.49□□□□□ -0.09
TRAF4-216ENST00000586813 SECTM1Q8WVN6 248 aa14.49□□□□□ -0.09
TRAF4-216ENST00000586813 CXorf58Q96LI9 332 aa14.49□□□□□ -0.09
TRAF4-216ENST00000586813 GGTLC1Q9BX51 225 aa14.49□□□□□ -0.09
TRAF4-216ENST00000586813 RHBDL2Q9NX52 303 aa14.49□□□□□ -0.09
TRAF4-216ENST00000586813 BET1LQ9NYM9 111 aa14.49□□□□□ -0.09
TRAF4-216ENST00000586813 TRBV7-1A0A0A6YYK4 115 aa14.48□□□□□ -0.09
TRAF4-216ENST00000586813 ARPC4P59998 168 aa14.48□□□□□ -0.09
TRAF4-216ENST00000586813 SFXN4Q6P4A7 337 aa14.48□□□□□ -0.09
TRAF4-216ENST00000586813 UNQ9165/PRO28630Q6UXU0 137 aa14.48□□□□□ -0.09
TRAF4-216ENST00000586813 TPRA1Q86W33 373 aa14.48□□□□□ -0.09
TRAF4-216ENST00000586813 SPAG16Q8N0X2 631 aa14.48□□□□□ -0.09
TRAF4-216ENST00000586813 BEST4Q8NFU0 473 aa14.48□□□□□ -0.09
TRAF4-216ENST00000586813 OR13F1Q8NGS4 319 aa14.48□□□□□ -0.09
TRAF4-216ENST00000586813 HRASLSQ9HDD0 168 aa14.48□□□□□ -0.09
TRAF4-216ENST00000586813 CCL28Q9NRJ3 127 aa14.48□□□□□ -0.09
TRAF4-216ENST00000586813 RRP15Q9Y3B9 282 aaKnown RBP14.48□□□□□ -0.09
TRAF4-216ENST00000586813 LOC102724200A0A096LPH7 203 aaPredicted RBP14.47□□□□□ -0.09
TRAF4-216ENST00000586813 MRPS14O60783 128 aaKnown RBP14.47□□□□□ -0.09
TRAF4-216ENST00000586813 CLEC3BP05452 202 aa14.47□□□□□ -0.09
TRAF4-216ENST00000586813 PTHLHP12272 177 aa14.47□□□□□ -0.09
TRAF4-216ENST00000586813 PSMB9P28065 219 aa14.47□□□□□ -0.09
TRAF4-216ENST00000586813 FCGR2CP31995 323 aa14.47□□□□□ -0.09
TRAF4-216ENST00000586813 OR2B8PP59922 312 aa14.47□□□□□ -0.09
TRAF4-216ENST00000586813 ANKRD55Q3KP44 614 aa14.47□□□□□ -0.09
TRAF4-216ENST00000586813 TM4SF20Q53R12 229 aa14.47□□□□□ -0.09
TRAF4-216ENST00000586813 OVOL2Q9BRP0 275 aa14.47□□□□□ -0.09
TRAF4-216ENST00000586813 AIFM2Q9BRQ8 373 aa14.47□□□□□ -0.09
TRAF4-216ENST00000586813 IGLC7A0M8Q6 106 aa14.46□□□□□ -0.09
TRAF4-216ENST00000586813 RBFOX2O43251 390 aaKnown RBP eCLIP14.46□□□□□ -0.091e-6■□□□□ 9.7
TRAF4-216ENST00000586813 GPR183P32249 361 aa14.46□□□□□ -0.09
TRAF4-216ENST00000586813 MARC2Q969Z3 335 aa14.46□□□□□ -0.09
TRAF4-216ENST00000586813 SULT1C2O00338 296 aa14.45□□□□□ -0.1
TRAF4-216ENST00000586813 PPYP01298 95 aa14.45□□□□□ -0.1
TRAF4-216ENST00000586813 C8orf88P0DMB2 117 aa14.45□□□□□ -0.1
TRAF4-216ENST00000586813 TAS2R31P59538 309 aa14.45□□□□□ -0.1
TRAF4-216ENST00000586813 SPARTQ8N0X7 666 aa14.45□□□□□ -0.1
TRAF4-216ENST00000586813 GVQW1Q8N7I0 195 aa14.45□□□□□ -0.1
TRAF4-216ENST00000586813 ZBTB34Q8NCN2 500 aa14.45□□□□□ -0.1
TRAF4-216ENST00000586813 ZNF502Q8TBZ5 544 aa14.45□□□□□ -0.1
TRAF4-216ENST00000586813 SLC25A38Q96DW6 304 aa14.45□□□□□ -0.1
TRAF4-216ENST00000586813 RAB26Q9ULW5 256 aa14.45□□□□□ -0.1
TRAF4-216ENST00000586813 SSR3Q9UNL2 185 aa14.45□□□□□ -0.1
TRAF4-216ENST00000586813 TRAV3A0A0B4J244 114 aa14.44□□□□□ -0.1
TRAF4-216ENST00000586813 TRAV25A0A0B4J276 109 aa14.44□□□□□ -0.1
TRAF4-216ENST00000586813 CATR1Q13166 79 aa14.44□□□□□ -0.1
TRAF4-216ENST00000586813 POU2AF1Q16633 256 aa14.44□□□□□ -0.1
TRAF4-216ENST00000586813 ZNF585BQ52M93 769 aa14.44□□□□□ -0.1
TRAF4-216ENST00000586813 RBPMS2Q6ZRY4 209 aaKnown RBP14.44□□□□□ -0.1
TRAF4-216ENST00000586813 HOGA1Q86XE5 327 aa14.44□□□□□ -0.1
TRAF4-216ENST00000586813 OR1L6Q8NGR2 347 aa14.44□□□□□ -0.1
TRAF4-216ENST00000586813 FCGR1BQ92637 280 aa14.44□□□□□ -0.1
TRAF4-216ENST00000586813 SRSF8Q9BRL6 282 aaKnown RBP14.44□□□□□ -0.1
TRAF4-216ENST00000586813 SLC5A7Q9GZV3 580 aa14.44□□□□□ -0.1
TRAF4-216ENST00000586813 MRPL27Q9P0M9 148 aaKnown RBP14.44□□□□□ -0.1
TRAF4-216ENST00000586813 UFC1Q9Y3C8 167 aa14.44□□□□□ -0.1
TRAF4-216ENST00000586813 ETV7Q9Y603 341 aa14.44□□□□□ -0.1
TRAF4-216ENST00000586813 TRAV18A0A075B6X5 111 aa14.43□□□□□ -0.1
TRAF4-216ENST00000586813 IGHV3-35A0A0C4DH35 117 aa14.43□□□□□ -0.1
TRAF4-216ENST00000586813 UPK2O00526 184 aa14.43□□□□□ -0.1
TRAF4-216ENST00000586813 HPRT1P00492 218 aa14.43□□□□□ -0.1
TRAF4-216ENST00000586813 NQO2P16083 231 aa14.43□□□□□ -0.1
TRAF4-216ENST00000586813 SDC2P34741 201 aa14.43□□□□□ -0.1
TRAF4-216ENST00000586813 ELLP55199 621 aaPredicted RBP14.43□□□□□ -0.1
TRAF4-216ENST00000586813 SCAND1P57086 179 aa14.43□□□□□ -0.1
TRAF4-216ENST00000586813 FXYD4P59646 89 aa14.43□□□□□ -0.1
TRAF4-216ENST00000586813 ZNF773Q6PK81 442 aa14.43□□□□□ -0.1
TRAF4-216ENST00000586813 PLET1Q6UQ28 207 aa14.43□□□□□ -0.1
TRAF4-216ENST00000586813 OR5H6Q8NGV6 325 aa14.43□□□□□ -0.1
TRAF4-216ENST00000586813 LINC00476Q8WZB0 136 aa14.43□□□□□ -0.1
TRAF4-216ENST00000586813 COMMD5Q9GZQ3 224 aa14.43□□□□□ -0.1
TRAF4-216ENST00000586813 TMEM140Q9NV12 185 aa14.43□□□□□ -0.1
TRAF4-216ENST00000586813 THYN1Q9P016 225 aa14.43□□□□□ -0.1
TRAF4-216ENST00000586813 FGF2P09038 288 aa14.42□□□□□ -0.1
TRAF4-216ENST00000586813 CLEC2LP0C7M8 214 aa14.42□□□□□ -0.1
TRAF4-216ENST00000586813 PTBP1P26599 531 aaKnown RBP eCLIP14.42□□□□□ -0.1
TRAF4-216ENST00000586813 MXD1Q05195 221 aa14.42□□□□□ -0.1
TRAF4-216ENST00000586813 OR51H1Q8NH63 302 aa14.42□□□□□ -0.1
TRAF4-216ENST00000586813 TMEM190Q8WZ59 177 aa14.42□□□□□ -0.1
TRAF4-216ENST00000586813 QTRT1Q9BXR0 403 aaKnown RBP14.42□□□□□ -0.1
TRAF4-216ENST00000586813 ZNF436Q9C0F3 470 aaPredicted RBP14.42□□□□□ -0.1
TRAF4-216ENST00000586813 A0A0A6YYH2 397 aa14.41□□□□□ -0.1
TRAF4-216ENST00000586813 A6NJ64 397 aa14.41□□□□□ -0.1
TRAF4-216ENST00000586813 S1PR2O95136 353 aa14.41□□□□□ -0.1
TRAF4-216ENST00000586813 FCER2P06734 321 aa14.41□□□□□ -0.1
TRAF4-216ENST00000586813 ZNF818PQ6ZRF7 136 aa14.41□□□□□ -0.1
TRAF4-216ENST00000586813 OR2C3Q8N628 320 aa14.41□□□□□ -0.1
TRAF4-216ENST00000586813 GDPD1Q8N9F7 314 aa14.41□□□□□ -0.1
TRAF4-216ENST00000586813 DMBX1Q8NFW5 382 aa14.41□□□□□ -0.1
TRAF4-216ENST00000586813 OR10W1Q8NGF6 305 aa14.41□□□□□ -0.1
TRAF4-216ENST00000586813 SPAG8Q99932 426 aaPredicted RBP14.41□□□□□ -0.1
TRAF4-216ENST00000586813 C5orf66Q9H5L9 145 aa14.41□□□□□ -0.1
TRAF4-216ENST00000586813 PLEKHA2Q9HB19 425 aa14.41□□□□□ -0.1
TRAF4-216ENST00000586813 TGOLN2O43493 480 aa14.4□□□□□ -0.1
TRAF4-216ENST00000586813 APOC4P55056 127 aa14.4□□□□□ -0.1
TRAF4-216ENST00000586813 PMS2P11Q13670 270 aa14.4□□□□□ -0.1
TRAF4-216ENST00000586813 IDNKQ5T6J7 187 aa14.4□□□□□ -0.1
TRAF4-216ENST00000586813 AADACL3Q5VUY0 350 aa14.4□□□□□ -0.1
TRAF4-216ENST00000586813 THOC7Q6I9Y2 204 aaKnown RBP14.4□□□□□ -0.1
TRAF4-216ENST00000586813 TMEM17Q86X19 198 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms