RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 FLNCQ14315 2725 aa12.58□□□□□ -0.4
COMMD4-210ENST00000564587 RELNP78509 3460 aa12.57□□□□□ -0.4
COMMD4-210ENST00000564587 A0A1W2PN81 502 aa12.57□□□□□ -0.4
COMMD4-210ENST00000564587 INS-IGF2F8WCM5 200 aa12.57□□□□□ -0.4
COMMD4-210ENST00000564587 TRIM77I1YAP6 450 aa12.57□□□□□ -0.4
COMMD4-210ENST00000564587 FBXO24O75426 580 aa12.57□□□□□ -0.4
COMMD4-210ENST00000564587 FAM157CP0CG43 387 aa12.57□□□□□ -0.4
COMMD4-210ENST00000564587 MAS1LP35410 378 aa12.57□□□□□ -0.4
COMMD4-210ENST00000564587 CHRNA7P36544 502 aa12.57□□□□□ -0.4
COMMD4-210ENST00000564587 UBE2E1P51965 193 aa12.57□□□□□ -0.4
COMMD4-210ENST00000564587 F2RL1P55085 397 aa12.57□□□□□ -0.4
COMMD4-210ENST00000564587 SLC38A11Q08AI6 406 aa12.57□□□□□ -0.4
COMMD4-210ENST00000564587 FAM74A1Q5RGS3 127 aa12.57□□□□□ -0.4
COMMD4-210ENST00000564587 ZNF787Q6DD87 383 aa12.57□□□□□ -0.4
COMMD4-210ENST00000564587 HCP5Q6MZN7 132 aa12.57□□□□□ -0.4
COMMD4-210ENST00000564587 COMMD7Q86VX2 200 aa12.57□□□□□ -0.4
COMMD4-210ENST00000564587 ZDHHC16Q969W1 377 aa12.57□□□□□ -0.4
COMMD4-210ENST00000564587 OR4C12Q96R67 309 aa12.57□□□□□ -0.4
COMMD4-210ENST00000564587 TMEM147Q9BVK8 224 aa12.57□□□□□ -0.4
COMMD4-210ENST00000564587 BEX4Q9NWD9 120 aaPredicted RBP12.57□□□□□ -0.4
COMMD4-210ENST00000564587 ANKRD17O75179 2603 aaKnown RBP12.57□□□□□ -0.4
COMMD4-210ENST00000564587 A0A1W2PPI3 338 aa12.56□□□□□ -0.4
COMMD4-210ENST00000564587 IFNA10P01566 189 aa12.56□□□□□ -0.4
COMMD4-210ENST00000564587 IGLV2-23P01705 113 aa12.56□□□□□ -0.4
COMMD4-210ENST00000564587 HOXB4P17483 251 aaPredicted RBP12.56□□□□□ -0.4
COMMD4-210ENST00000564587 HABP2Q14520 560 aaPredicted RBP12.56□□□□□ -0.4
COMMD4-210ENST00000564587 MMD2Q8IY49 270 aa12.56□□□□□ -0.4
COMMD4-210ENST00000564587 HSD17B11Q8NBQ5 300 aa12.56□□□□□ -0.4
COMMD4-210ENST00000564587 PERPQ96FX8 193 aa12.56□□□□□ -0.4
COMMD4-210ENST00000564587 UTP20O75691 2785 aaKnown RBP12.56□□□□□ -0.4
COMMD4-210ENST00000564587 TEX50A0A1B0GTY4 177 aa12.55□□□□□ -0.4
COMMD4-210ENST00000564587 PMS2P5A8MQ11 134 aa12.55□□□□□ -0.4
COMMD4-210ENST00000564587 ZNF705EA8MWA4 302 aaPredicted RBP12.55□□□□□ -0.4
COMMD4-210ENST00000564587 ATP6V0CP27449 155 aa12.55□□□□□ -0.4
COMMD4-210ENST00000564587 LRRC75BQ2VPJ9 315 aa12.55□□□□□ -0.4
COMMD4-210ENST00000564587 OR8G2PQ6IF36 304 aa12.55□□□□□ -0.4
COMMD4-210ENST00000564587 LRRC75A-AS1Q8N1F1 130 aa12.55□□□□□ -0.4
COMMD4-210ENST00000564587 PSMG3Q9BT73 122 aaPredicted RBP12.55□□□□□ -0.4
COMMD4-210ENST00000564587 PARP11Q9NR21 331 aa12.55□□□□□ -0.4
COMMD4-210ENST00000564587 MMP26Q9NRE1 261 aa12.55□□□□□ -0.4
COMMD4-210ENST00000564587 HRNRQ86YZ3 2850 aaPredicted RBP12.55□□□□□ -0.4
COMMD4-210ENST00000564587 IGHV4-61A0A0C4DH41 118 aa12.54□□□□□ -0.4
COMMD4-210ENST00000564587 C15orf62A8K5M9 175 aa12.54□□□□□ -0.4
COMMD4-210ENST00000564587 RNASEK-C17orf49H0YIS7 233 aa12.54□□□□□ -0.4
COMMD4-210ENST00000564587 SOX15O60248 233 aa12.54□□□□□ -0.4
COMMD4-210ENST00000564587 DLX1P56177 255 aa12.54□□□□□ -0.4
COMMD4-210ENST00000564587 ERHP84090 104 aaKnown RBP12.54□□□□□ -0.4
COMMD4-210ENST00000564587 PAX8Q06710 450 aa12.54□□□□□ -0.4
COMMD4-210ENST00000564587 ARL16Q0P5N6 197 aa12.54□□□□□ -0.4
COMMD4-210ENST00000564587 VWC2Q2TAL6 325 aa12.54□□□□□ -0.4
COMMD4-210ENST00000564587 DPPA3Q6W0C5 159 aa12.54□□□□□ -0.4
COMMD4-210ENST00000564587 HSD17B13Q7Z5P4 300 aaPredicted RBP12.54□□□□□ -0.4
COMMD4-210ENST00000564587 HAPLN4Q86UW8 402 aa12.54□□□□□ -0.4
COMMD4-210ENST00000564587 EIF4E3Q8N5X7 224 aaKnown RBP12.54□□□□□ -0.4
COMMD4-210ENST00000564587 SLC24A4Q8NFF2 622 aa12.54□□□□□ -0.4
COMMD4-210ENST00000564587 OR2G3Q8NGZ4 309 aa12.54□□□□□ -0.4
COMMD4-210ENST00000564587 PCNPQ8WW12 178 aaKnown RBP12.54□□□□□ -0.4
COMMD4-210ENST00000564587 MALSU1Q96EH3 234 aa12.54□□□□□ -0.4
COMMD4-210ENST00000564587 UQCC1Q9NVA1 299 aa12.54□□□□□ -0.4
COMMD4-210ENST00000564587 TIMM9Q9Y5J7 89 aa12.54□□□□□ -0.4
COMMD4-210ENST00000564587 IGHV4-30-2A0A087WSY4 118 aa12.53□□□□□ -0.4
COMMD4-210ENST00000564587 FAM157AC9JC47 383 aa12.53□□□□□ -0.4
COMMD4-210ENST00000564587 SLC25A17O43808 307 aa12.53□□□□□ -0.4
COMMD4-210ENST00000564587 CRYGBP07316 175 aa12.53□□□□□ -0.4
COMMD4-210ENST00000564587 NPY1RP25929 384 aa12.53□□□□□ -0.4
COMMD4-210ENST00000564587 DLK1P80370 383 aa12.53□□□□□ -0.4
COMMD4-210ENST00000564587 SERF2P84101 59 aa12.53□□□□□ -0.4
COMMD4-210ENST00000564587 KLRD1Q13241 179 aa12.53□□□□□ -0.4
COMMD4-210ENST00000564587 PSG5Q15238 335 aa12.53□□□□□ -0.4
COMMD4-210ENST00000564587 CLEC12BQ2HXU8 276 aa12.53□□□□□ -0.4
COMMD4-210ENST00000564587 SPINK9Q5DT21 86 aa12.53□□□□□ -0.4
COMMD4-210ENST00000564587 ETV3LQ6ZN32 361 aa12.53□□□□□ -0.4
COMMD4-210ENST00000564587 CXorf58Q96LI9 332 aa12.53□□□□□ -0.4
COMMD4-210ENST00000564587 CITED4Q96RK1 184 aa12.53□□□□□ -0.4
COMMD4-210ENST00000564587 TBX15Q96SF7 602 aa12.53□□□□□ -0.4
COMMD4-210ENST00000564587 WDR61Q9GZS3 305 aaKnown RBP12.53□□□□□ -0.4
COMMD4-210ENST00000564587 NDUFA4L2Q9NRX3 87 aa12.53□□□□□ -0.4
COMMD4-210ENST00000564587 CREBBPQ92793 2442 aa12.53□□□□□ -0.4
COMMD4-210ENST00000564587 ARHGAP32A7KAX9 2087 aa12.53□□□□□ -0.4
COMMD4-210ENST00000564587 IGHV3-72A0A0B4J1Y9 119 aa12.52□□□□□ -0.41
COMMD4-210ENST00000564587 RAB19A4D1S5 217 aa12.52□□□□□ -0.41
COMMD4-210ENST00000564587 FNDC10F2Z333 226 aa12.52□□□□□ -0.41
COMMD4-210ENST00000564587 TIMM23O14925 209 aa12.52□□□□□ -0.41
COMMD4-210ENST00000564587 TSPAN9O75954 239 aa12.52□□□□□ -0.41
COMMD4-210ENST00000564587 ACTL6BO94805 426 aa12.52□□□□□ -0.41
COMMD4-210ENST00000564587 VENTXO95231 258 aa12.52□□□□□ -0.41
COMMD4-210ENST00000564587 MOSP00540 346 aa12.52□□□□□ -0.41
COMMD4-210ENST00000564587 PRH1P02810 166 aa12.52□□□□□ -0.41
COMMD4-210ENST00000564587 GATA3P23771 443 aa12.52□□□□□ -0.41
COMMD4-210ENST00000564587 SUB1P53999 127 aaKnown RBP eCLIP12.52□□□□□ -0.41
COMMD4-210ENST00000564587 C2orf83Q53S99 150 aa12.52□□□□□ -0.41
COMMD4-210ENST00000564587 IL34Q6ZMJ4 242 aa12.52□□□□□ -0.41
COMMD4-210ENST00000564587 OR2T10Q8NGZ9 312 aa12.52□□□□□ -0.41
COMMD4-210ENST00000564587 CFHR4Q92496 578 aa12.52□□□□□ -0.41
COMMD4-210ENST00000564587 HINT2Q9BX68 163 aa12.52□□□□□ -0.41
COMMD4-210ENST00000564587 ZNF430Q9H8G1 570 aaPredicted RBP12.52□□□□□ -0.41
COMMD4-210ENST00000564587 AKAP6Q13023 2319 aa12.52□□□□□ -0.41
COMMD4-210ENST00000564587 TET2Q6N021 2002 aaPredicted RBP12.52□□□□□ -0.41
COMMD4-210ENST00000564587 NBPF19A0A087WUL8 3843 aa12.51□□□□□ -0.41
COMMD4-210ENST00000564587 MFSD2BA6NFX1 497 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms