RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 EDN2P20800 178 aa13.41□□□□□ -0.26
NME3-205ENST00000563854 CD300EQ496F6 205 aaPredicted RBP13.41□□□□□ -0.26
NME3-205ENST00000563854 FAM209BQ5JX69 171 aa13.41□□□□□ -0.26
NME3-205ENST00000563854 CTRB2Q6GPI1 263 aa13.41□□□□□ -0.26
NME3-205ENST00000563854 EEF1AKMT3Q96AZ1 226 aa13.41□□□□□ -0.26
NME3-205ENST00000563854 CCDC140Q96MF4 163 aa13.41□□□□□ -0.26
NME3-205ENST00000563854 FANCD2OSQ96PS1 177 aa13.41□□□□□ -0.26
NME3-205ENST00000563854 COMMD5Q9GZQ3 224 aa13.41□□□□□ -0.26
NME3-205ENST00000563854 ZC4H2Q9NQZ6 224 aa13.41□□□□□ -0.26
NME3-205ENST00000563854 C19orf73Q9NVV2 129 aa13.41□□□□□ -0.26
NME3-205ENST00000563854 COMMD3Q9UBI1 195 aa13.41□□□□□ -0.26
NME3-205ENST00000563854 CGB1A6NKQ9 187 aa13.4□□□□□ -0.26
NME3-205ENST00000563854 UPK2O00526 184 aa13.4□□□□□ -0.26
NME3-205ENST00000563854 EIF4EP06730 217 aaKnown RBP13.4□□□□□ -0.26
NME3-205ENST00000563854 CRYGCP07315 174 aa13.4□□□□□ -0.26
NME3-205ENST00000563854 PRSS3P35030 304 aa13.4□□□□□ -0.26
NME3-205ENST00000563854 TAS2R46P59540 309 aa13.4□□□□□ -0.26
NME3-205ENST00000563854 OR2B8PP59922 312 aa13.4□□□□□ -0.26
NME3-205ENST00000563854 CD81P60033 236 aa13.4□□□□□ -0.26
NME3-205ENST00000563854 ERVK-16P61578 105 aa13.4□□□□□ -0.26
NME3-205ENST00000563854 NCS1P62166 190 aa13.4□□□□□ -0.26
NME3-205ENST00000563854 GUCA2BQ16661 112 aa13.4□□□□□ -0.26
NME3-205ENST00000563854 ADAMTSL5Q6ZMM2 481 aa13.4□□□□□ -0.26
NME3-205ENST00000563854 BORCS5Q969J3 196 aa13.4□□□□□ -0.26
NME3-205ENST00000563854 SLC25A46Q96AG3 418 aa13.4□□□□□ -0.26
NME3-205ENST00000563854 TM2D3Q9BRN9 247 aa13.4□□□□□ -0.26
NME3-205ENST00000563854 PLEKHA3Q9HB20 300 aa13.4□□□□□ -0.26
NME3-205ENST00000563854 ZNF320A2RRD8 509 aa13.39□□□□□ -0.27
NME3-205ENST00000563854 MFSD2BA6NFX1 497 aa13.39□□□□□ -0.27
NME3-205ENST00000563854 C2orf70A6NJV1 201 aa13.39□□□□□ -0.27
NME3-205ENST00000563854 HIST1H1BP16401 226 aaKnown RBP13.39□□□□□ -0.27
NME3-205ENST00000563854 HLA-DMAP28067 261 aa13.39□□□□□ -0.27
NME3-205ENST00000563854 GNRHRP30968 328 aa13.39□□□□□ -0.27
NME3-205ENST00000563854 VBP1P61758 197 aa13.39□□□□□ -0.27
NME3-205ENST00000563854 SNX29P2Q8IUI4 249 aa13.39□□□□□ -0.27
NME3-205ENST00000563854 OR2K2Q8NGT1 345 aa13.39□□□□□ -0.27
NME3-205ENST00000563854 CD300LFQ8TDQ1 290 aa13.39□□□□□ -0.27
NME3-205ENST00000563854 CACNG8Q8WXS5 425 aa13.39□□□□□ -0.27
NME3-205ENST00000563854 MOB3AQ96BX8 217 aa13.39□□□□□ -0.27
NME3-205ENST00000563854 THAP7Q9BT49 309 aaPredicted RBP13.39□□□□□ -0.27
NME3-205ENST00000563854 FUNDC2Q9BWH2 189 aa13.39□□□□□ -0.27
NME3-205ENST00000563854 FXYD6Q9H0Q3 95 aa13.39□□□□□ -0.27
NME3-205ENST00000563854 PLEKHA2Q9HB19 425 aa13.39□□□□□ -0.27
NME3-205ENST00000563854 DMRT1Q9Y5R6 373 aa13.39□□□□□ -0.27
NME3-205ENST00000563854 A8MZ25 164 aa13.38□□□□□ -0.27
NME3-205ENST00000563854 FOLR2P14207 255 aa13.38□□□□□ -0.27
NME3-205ENST00000563854 HRH1P35367 487 aa13.38□□□□□ -0.27
NME3-205ENST00000563854 HINT2Q9BX68 163 aa13.38□□□□□ -0.27
NME3-205ENST00000563854 PALMDQ9NP74 551 aa13.38□□□□□ -0.27
NME3-205ENST00000563854 COMMD9Q9P000 198 aa13.38□□□□□ -0.27
NME3-205ENST00000563854 ANAPC10Q9UM13 185 aa13.38□□□□□ -0.27
NME3-205ENST00000563854 IGLV11-55A0A075B6I3 123 aa13.37□□□□□ -0.27
NME3-205ENST00000563854 SMIM31A0A1B0GVY4 71 aa13.37□□□□□ -0.27
NME3-205ENST00000563854 IGLC7A0M8Q6 106 aa13.37□□□□□ -0.27
NME3-205ENST00000563854 PGLYRP1O75594 196 aaPredicted RBP13.37□□□□□ -0.27
NME3-205ENST00000563854 TPPPO94811 219 aa13.37□□□□□ -0.27
NME3-205ENST00000563854 GPR183P32249 361 aa13.37□□□□□ -0.27
NME3-205ENST00000563854 LPAR6P43657 344 aa13.37□□□□□ -0.27
NME3-205ENST00000563854 POU2AF1Q16633 256 aa13.37□□□□□ -0.27
NME3-205ENST00000563854 HAGHQ16775 308 aa13.37□□□□□ -0.27
NME3-205ENST00000563854 PHLDA2Q53GA4 152 aa13.37□□□□□ -0.27
NME3-205ENST00000563854 DHRS11Q6UWP2 260 aa13.37□□□□□ -0.27
NME3-205ENST00000563854 CMTM1Q8IZ96 169 aa13.37□□□□□ -0.27
NME3-205ENST00000563854 OR10W1Q8NGF6 305 aa13.37□□□□□ -0.27
NME3-205ENST00000563854 OR6F1Q8NGZ6 308 aa13.37□□□□□ -0.27
NME3-205ENST00000563854 NEURL2Q9BR09 285 aa13.37□□□□□ -0.27
NME3-205ENST00000563854 SPATA25Q9BR10 227 aa13.37□□□□□ -0.27
NME3-205ENST00000563854 QTRT1Q9BXR0 403 aaKnown RBP13.37□□□□□ -0.27
NME3-205ENST00000563854 SLC2A8Q9NY64 477 aa13.37□□□□□ -0.27
NME3-205ENST00000563854 MARCH11A6NNE9 402 aa13.36□□□□□ -0.27
NME3-205ENST00000563854 LGALS9O00182 355 aa13.36□□□□□ -0.27
NME3-205ENST00000563854 KRASP01116 189 aa13.36□□□□□ -0.27
NME3-205ENST00000563854 CD7P09564 240 aa13.36□□□□□ -0.27
NME3-205ENST00000563854 LYL1P12980 280 aa13.36□□□□□ -0.27
NME3-205ENST00000563854 NAT1P18440 290 aa13.36□□□□□ -0.27
NME3-205ENST00000563854 F2RP25116 425 aa13.36□□□□□ -0.27
NME3-205ENST00000563854 MECP2P51608 486 aaKnown RBP13.36□□□□□ -0.27
NME3-205ENST00000563854 TSPAN5P62079 268 aa13.36□□□□□ -0.27
NME3-205ENST00000563854 DEFB114Q30KQ6 69 aa13.36□□□□□ -0.27
NME3-205ENST00000563854 FAM106AQ4KMX7 169 aa13.36□□□□□ -0.27
NME3-205ENST00000563854 RNASE12Q5GAN4 147 aaKnown RBP13.36□□□□□ -0.27
NME3-205ENST00000563854 CASC10Q5T4H9 136 aa13.36□□□□□ -0.27
NME3-205ENST00000563854 FCAMRQ8WWV6 532 aa13.36□□□□□ -0.27
NME3-205ENST00000563854 WDR89Q96FK6 387 aaPredicted RBP13.36□□□□□ -0.27
NME3-205ENST00000563854 CXorf58Q96LI9 332 aa13.36□□□□□ -0.27
NME3-205ENST00000563854 WFDC10AQ9H1F0 79 aa13.36□□□□□ -0.27
NME3-205ENST00000563854 NSG2Q9Y328 171 aa13.36□□□□□ -0.27
NME3-205ENST00000563854 TRBV7-1A0A0A6YYK4 115 aa13.35□□□□□ -0.27
NME3-205ENST00000563854 IGHV3-35A0A0C4DH35 117 aa13.35□□□□□ -0.27
NME3-205ENST00000563854 GPR31O00270 319 aa13.35□□□□□ -0.27
NME3-205ENST00000563854 HPGDSO60760 199 aa13.35□□□□□ -0.27
NME3-205ENST00000563854 CLEC3BP05452 202 aa13.35□□□□□ -0.27
NME3-205ENST00000563854 TRAPPC2P0DI81 140 aa13.35□□□□□ -0.27
NME3-205ENST00000563854 TRAPPC2BP0DI82 140 aa13.35□□□□□ -0.27
NME3-205ENST00000563854 OR13C7P0DN81 318 aa13.35□□□□□ -0.27
NME3-205ENST00000563854 G6PCP35575 357 aa13.35□□□□□ -0.27
NME3-205ENST00000563854 ZFAND6Q6FIF0 208 aa13.35□□□□□ -0.27
NME3-205ENST00000563854 GPHB5Q86YW7 130 aa13.35□□□□□ -0.27
NME3-205ENST00000563854 ISOC1Q96CN7 298 aa13.35□□□□□ -0.27
NME3-205ENST00000563854 DGCR14Q96DF8 476 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms