RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 WIPI2Q9Y4P8 454 aa9.86□□□□□ -0.83
ABCA3-203ENST00000563623 CDKN1BP46527 198 aa9.85□□□□□ -0.83
ABCA3-203ENST00000563623 RPL31P62899 125 aaKnown RBP9.85□□□□□ -0.83
ABCA3-203ENST00000563623 COA6Q5JTJ3 125 aaKnown RBP9.85□□□□□ -0.83
ABCA3-203ENST00000563623 COQ2Q96H96 371 aa9.85□□□□□ -0.83
ABCA3-203ENST00000563623 S1PR3Q99500 378 aa9.85□□□□□ -0.83
ABCA3-203ENST00000563623 ZNF430Q9H8G1 570 aaPredicted RBP9.85□□□□□ -0.83
ABCA3-203ENST00000563623 NAT8BQ9UHF3 227 aa9.85□□□□□ -0.83
ABCA3-203ENST00000563623 WDR83OSQ9Y284 106 aa9.85□□□□□ -0.83
ABCA3-203ENST00000563623 SERF1AO75920 110 aa9.85□□□□□ -0.83
ABCA3-203ENST00000563623 NTF3P20783 257 aa9.85□□□□□ -0.83
ABCA3-203ENST00000563623 RAB31Q13636 194 aa9.85□□□□□ -0.83
ABCA3-203ENST00000563623 ZNF146Q15072 292 aa9.85□□□□□ -0.83
ABCA3-203ENST00000563623 SPATA31B1PQ5VZV4 182 aa9.85□□□□□ -0.83
ABCA3-203ENST00000563623 HSD17B10Q99714 261 aaKnown RBP9.85□□□□□ -0.83
ABCA3-203ENST00000563623 CHTOPQ9Y3Y2 248 aaKnown RBP9.85□□□□□ -0.83
ABCA3-203ENST00000563623 ABCA1O95477 2261 aa9.85□□□□□ -0.83
ABCA3-203ENST00000563623 CACNA1HO95180 2353 aa9.85□□□□□ -0.83
ABCA3-203ENST00000563623 TRAV3A0A0B4J244 114 aa9.84□□□□□ -0.83
ABCA3-203ENST00000563623 OR7C2O60412 319 aa9.84□□□□□ -0.83
ABCA3-203ENST00000563623 SP1P08047 785 aa9.84□□□□□ -0.83
ABCA3-203ENST00000563623 BRS3P32247 399 aa9.84□□□□□ -0.83
ABCA3-203ENST00000563623 RIPPLY3P57055 190 aa9.84□□□□□ -0.83
ABCA3-203ENST00000563623 SOX8P57073 446 aa9.84□□□□□ -0.83
ABCA3-203ENST00000563623 FOXF2Q12947 444 aa9.84□□□□□ -0.83
ABCA3-203ENST00000563623 OR8I2Q8N0Y5 310 aa9.84□□□□□ -0.83
ABCA3-203ENST00000563623 SIGLECL1Q8N7X8 197 aa9.84□□□□□ -0.83
ABCA3-203ENST00000563623 ELOVL5Q9NYP7 299 aa9.84□□□□□ -0.83
ABCA3-203ENST00000563623 ZFP30Q9Y2G7 519 aa9.84□□□□□ -0.83
ABCA3-203ENST00000563623 CUL9Q8IWT3 2517 aa9.84□□□□□ -0.83
ABCA3-203ENST00000563623 TNCP24821 2201 aa9.84□□□□□ -0.83
ABCA3-203ENST00000563623 FXYD3Q14802 87 aa9.84□□□□□ -0.83
ABCA3-203ENST00000563623 SMIM21Q3B7S5 101 aa9.84□□□□□ -0.83
ABCA3-203ENST00000563623 Q6ZVH6 145 aa9.84□□□□□ -0.83
ABCA3-203ENST00000563623 OR2Z1Q8NG97 314 aa9.84□□□□□ -0.83
ABCA3-203ENST00000563623 RNF2Q99496 336 aa9.84□□□□□ -0.83
ABCA3-203ENST00000563623 LRFN3Q9BTN0 628 aa9.84□□□□□ -0.83
ABCA3-203ENST00000563623 IL19Q9UHD0 177 aa9.84□□□□□ -0.83
ABCA3-203ENST00000563623 PMS2P5A8MQ11 134 aa9.84□□□□□ -0.83
ABCA3-203ENST00000563623 CXorf1O96002 111 aa9.84□□□□□ -0.83
ABCA3-203ENST00000563623 MT-CO2P00403 227 aa9.84□□□□□ -0.83
ABCA3-203ENST00000563623 OR5G3P0C626 314 aa9.84□□□□□ -0.83
ABCA3-203ENST00000563623 HLA-DRB5Q30154 266 aa9.84□□□□□ -0.83
ABCA3-203ENST00000563623 LDLRAD2Q5SZI1 272 aa9.84□□□□□ -0.83
ABCA3-203ENST00000563623 OR5AU1Q8NGC0 362 aa9.84□□□□□ -0.83
ABCA3-203ENST00000563623 ZCCHC14Q8WYQ9 949 aaKnown RBP9.84□□□□□ -0.83
ABCA3-203ENST00000563623 KLF3P57682 345 aaPredicted RBP9.83□□□□□ -0.84
ABCA3-203ENST00000563623 ERVK11-1P61568 191 aa9.83□□□□□ -0.84
ABCA3-203ENST00000563623 TDRG1Q3Y452 100 aa9.83□□□□□ -0.84
ABCA3-203ENST00000563623 SLC35E4Q6ICL7 350 aa9.83□□□□□ -0.84
ABCA3-203ENST00000563623 MRPL54Q6P161 138 aaKnown RBP9.83□□□□□ -0.84
ABCA3-203ENST00000563623 DEFB108BQ8NET1 73 aa9.83□□□□□ -0.84
ABCA3-203ENST00000563623 CLUHP3Q96NS8 147 aa9.83□□□□□ -0.84
ABCA3-203ENST00000563623 BRWD1-AS2P59051 145 aa9.83□□□□□ -0.84
ABCA3-203ENST00000563623 PSG5Q15238 335 aa9.83□□□□□ -0.84
ABCA3-203ENST00000563623 MMDQ15546 238 aa9.83□□□□□ -0.84
ABCA3-203ENST00000563623 C1orf194Q5T5A4 169 aa9.83□□□□□ -0.84
ABCA3-203ENST00000563623 TREML4Q6UXN2 200 aa9.83□□□□□ -0.84
ABCA3-203ENST00000563623 Q6ZR03 302 aa9.83□□□□□ -0.84
ABCA3-203ENST00000563623 TRBV20OR9-2A0A075B6H5 130 aa9.83□□□□□ -0.84
ABCA3-203ENST00000563623 SS18L1O75177 396 aaPredicted RBP9.83□□□□□ -0.84
ABCA3-203ENST00000563623 TYMSP04818 313 aa9.83□□□□□ -0.84
ABCA3-203ENST00000563623 AMTP48728 403 aa9.83□□□□□ -0.84
ABCA3-203ENST00000563623 ACP7Q6ZNF0 438 aa9.83□□□□□ -0.84
ABCA3-203ENST00000563623 CENPVQ7Z7K6 275 aaPredicted RBP9.83□□□□□ -0.84
ABCA3-203ENST00000563623 FAM216AQ8WUB2 273 aa9.83□□□□□ -0.84
ABCA3-203ENST00000563623 CXXC4Q9H2H0 198 aa9.83□□□□□ -0.84
ABCA3-203ENST00000563623 TMEM106BQ9NUM4 274 aa9.83□□□□□ -0.84
ABCA3-203ENST00000563623 ARFGEF3Q5TH69 2177 aa9.82□□□□□ -0.84
ABCA3-203ENST00000563623 C9orf172C9J069 976 aa9.82□□□□□ -0.84
ABCA3-203ENST00000563623 CCL25O15444 150 aa9.82□□□□□ -0.84
ABCA3-203ENST00000563623 FOXH1O75593 365 aa9.82□□□□□ -0.84
ABCA3-203ENST00000563623 GCHFRP30047 84 aa9.82□□□□□ -0.84
ABCA3-203ENST00000563623 TIMP3P35625 211 aa9.82□□□□□ -0.84
ABCA3-203ENST00000563623 RHOBP62745 196 aa9.82□□□□□ -0.84
ABCA3-203ENST00000563623 DOLPP1Q86YN1 238 aa9.82□□□□□ -0.84
ABCA3-203ENST00000563623 YTHDF2Q9Y5A9 579 aaKnown RBP9.82□□□□□ -0.84
ABCA3-203ENST00000563623 HCFC1P51610 2035 aa9.82□□□□□ -0.84
ABCA3-203ENST00000563623 F2Z2F3 143 aa9.82□□□□□ -0.84
ABCA3-203ENST00000563623 NDUFS8O00217 210 aa9.82□□□□□ -0.84
ABCA3-203ENST00000563623 MLNRO43193 412 aa9.82□□□□□ -0.84
ABCA3-203ENST00000563623 CGAP01215 116 aa9.82□□□□□ -0.84
ABCA3-203ENST00000563623 FRMD6-AS1P0C7T7 363 aa9.82□□□□□ -0.84
ABCA3-203ENST00000563623 IGHV1-2P23083 117 aa9.82□□□□□ -0.84
ABCA3-203ENST00000563623 BMI1P35226 326 aa9.82□□□□□ -0.84
ABCA3-203ENST00000563623 CDKN1AP38936 164 aa9.82□□□□□ -0.84
ABCA3-203ENST00000563623 RPL15P61313 204 aaKnown RBP9.82□□□□□ -0.84
ABCA3-203ENST00000563623 RPEL1Q2QD12 228 aa9.82□□□□□ -0.84
ABCA3-203ENST00000563623 SLC35E1Q96K37 410 aa9.82□□□□□ -0.84
ABCA3-203ENST00000563623 MGST2Q99735 147 aa9.82□□□□□ -0.84
ABCA3-203ENST00000563623 GGTLC1Q9BX51 225 aa9.82□□□□□ -0.84
ABCA3-203ENST00000563623 SEPSECSQ9HD40 501 aaKnown RBP9.82□□□□□ -0.84
ABCA3-203ENST00000563623 TCF19Q9Y242 345 aa9.82□□□□□ -0.84
ABCA3-203ENST00000563623 OR10J4P0C629 311 aa9.82□□□□□ -0.84
ABCA3-203ENST00000563623 MYOD1P15172 320 aa9.82□□□□□ -0.84
ABCA3-203ENST00000563623 CRYBB3P26998 211 aa9.82□□□□□ -0.84
ABCA3-203ENST00000563623 PRDX2P32119 198 aa9.82□□□□□ -0.84
ABCA3-203ENST00000563623 HINT1P49773 126 aaPredicted RBP9.82□□□□□ -0.84
ABCA3-203ENST00000563623 GNG4P50150 75 aa9.82□□□□□ -0.84
ABCA3-203ENST00000563623 TMEM183BQ1AE95 376 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms