RNA–Protein interactions for RNA: ENST00000562874.2

SF3B3-203, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-203ENST00000562874 ZNF2Q9BSG1 426 aaPredicted RBP11.91□□□□□ -0.5
SF3B3-203ENST00000562874 VCX3AQ9NNX9 186 aa11.91□□□□□ -0.5
SF3B3-203ENST00000562874 TMEM140Q9NV12 185 aa11.91□□□□□ -0.5
SF3B3-203ENST00000562874 SIGLEC8Q9NYZ4 499 aa11.91□□□□□ -0.5
SF3B3-203ENST00000562874 A0A087WXM4 84 aa11.9□□□□□ -0.5
SF3B3-203ENST00000562874 C2orf70A6NJV1 201 aa11.9□□□□□ -0.5
SF3B3-203ENST00000562874 A8MZ25 164 aa11.9□□□□□ -0.5
SF3B3-203ENST00000562874 RBFOX2O43251 390 aaKnown RBP eCLIP11.9□□□□□ -0.5
SF3B3-203ENST00000562874 GGCTO75223 188 aaKnown RBP11.9□□□□□ -0.5
SF3B3-203ENST00000562874 TNFAIP8O95379 198 aa11.9□□□□□ -0.5
SF3B3-203ENST00000562874 CRYGCP07315 174 aa11.9□□□□□ -0.5
SF3B3-203ENST00000562874 TAS2R31P59538 309 aa11.9□□□□□ -0.5
SF3B3-203ENST00000562874 OR2B8PP59922 312 aa11.9□□□□□ -0.5
SF3B3-203ENST00000562874 CASC10Q5T4H9 136 aa11.9□□□□□ -0.5
SF3B3-203ENST00000562874 CROCCP3Q8IVE0 287 aa11.9□□□□□ -0.5
SF3B3-203ENST00000562874 OR5H2Q8NGV7 314 aa11.9□□□□□ -0.5
SF3B3-203ENST00000562874 GIMAP1Q8WWP7 306 aa11.9□□□□□ -0.5
SF3B3-203ENST00000562874 RETNQ9HD89 108 aa11.9□□□□□ -0.5
SF3B3-203ENST00000562874 ANAPC10Q9UM13 185 aa11.9□□□□□ -0.5
SF3B3-203ENST00000562874 DYNC2H1Q8NCM8 4307 aaKnown RBP11.89□□□□□ -0.51
SF3B3-203ENST00000562874 IGLV11-55A0A075B6I3 123 aa11.89□□□□□ -0.51
SF3B3-203ENST00000562874 IGLC7A0M8Q6 106 aa11.89□□□□□ -0.51
SF3B3-203ENST00000562874 UPK2O00526 184 aa11.89□□□□□ -0.51
SF3B3-203ENST00000562874 HPRT1P00492 218 aa11.89□□□□□ -0.51
SF3B3-203ENST00000562874 CD7P09564 240 aa11.89□□□□□ -0.51
SF3B3-203ENST00000562874 DEFA4P12838 97 aa11.89□□□□□ -0.51
SF3B3-203ENST00000562874 NQO2P16083 231 aa11.89□□□□□ -0.51
SF3B3-203ENST00000562874 GNRHRP30968 328 aa11.89□□□□□ -0.51
SF3B3-203ENST00000562874 MECP2P51608 486 aaKnown RBP11.89□□□□□ -0.51
SF3B3-203ENST00000562874 HAGHQ16775 308 aa11.89□□□□□ -0.51
SF3B3-203ENST00000562874 ZFAND6Q6FIF0 208 aa11.89□□□□□ -0.51
SF3B3-203ENST00000562874 OR10W1Q8NGF6 305 aa11.89□□□□□ -0.51
SF3B3-203ENST00000562874 OR4A5Q8NH83 315 aa11.89□□□□□ -0.51
SF3B3-203ENST00000562874 EEF1AKMT3Q96AZ1 226 aa11.89□□□□□ -0.51
SF3B3-203ENST00000562874 MOB3AQ96BX8 217 aa11.89□□□□□ -0.51
SF3B3-203ENST00000562874 KCTD12Q96CX2 325 aaKnown RBP11.89□□□□□ -0.51
SF3B3-203ENST00000562874 TUBA4BQ9H853 241 aa11.89□□□□□ -0.51
SF3B3-203ENST00000562874 GAR1Q9NY12 217 aaKnown RBP11.89□□□□□ -0.51
SF3B3-203ENST00000562874 STARD9Q9P2P6 4700 aa11.88□□□□□ -0.51
SF3B3-203ENST00000562874 TMEM127O75204 238 aa11.88□□□□□ -0.51
SF3B3-203ENST00000562874 DHFRP00374 187 aa11.88□□□□□ -0.51
SF3B3-203ENST00000562874 FOLR2P14207 255 aa11.88□□□□□ -0.51
SF3B3-203ENST00000562874 GPR183P32249 361 aa11.88□□□□□ -0.51
SF3B3-203ENST00000562874 VBP1P61758 197 aa11.88□□□□□ -0.51
SF3B3-203ENST00000562874 POU2AF1Q16633 256 aa11.88□□□□□ -0.51
SF3B3-203ENST00000562874 GUCA2BQ16661 112 aa11.88□□□□□ -0.51
SF3B3-203ENST00000562874 WDR89Q96FK6 387 aaPredicted RBP11.88□□□□□ -0.51
SF3B3-203ENST00000562874 CITED4Q96RK1 184 aa11.88□□□□□ -0.51
SF3B3-203ENST00000562874 FAM110AQ9BQ89 295 aa11.88□□□□□ -0.51
SF3B3-203ENST00000562874 NEURL2Q9BR09 285 aa11.88□□□□□ -0.51
SF3B3-203ENST00000562874 SPATA25Q9BR10 227 aa11.88□□□□□ -0.51
SF3B3-203ENST00000562874 COMMD5Q9GZQ3 224 aa11.88□□□□□ -0.51
SF3B3-203ENST00000562874 COMMD3Q9UBI1 195 aa11.88□□□□□ -0.51
SF3B3-203ENST00000562874 IGHV3-35A0A0C4DH35 117 aa11.87□□□□□ -0.51
SF3B3-203ENST00000562874 ZNF320A2RRD8 509 aa11.87□□□□□ -0.51
SF3B3-203ENST00000562874 TMEM213A2RRL7 107 aa11.87□□□□□ -0.51
SF3B3-203ENST00000562874 MARCH11A6NNE9 402 aa11.87□□□□□ -0.51
SF3B3-203ENST00000562874 HLA-DMAP28067 261 aa11.87□□□□□ -0.51
SF3B3-203ENST00000562874 HRH1P35367 487 aa11.87□□□□□ -0.51
SF3B3-203ENST00000562874 TAS2R46P59540 309 aa11.87□□□□□ -0.51
SF3B3-203ENST00000562874 DEFB114Q30KQ6 69 aa11.87□□□□□ -0.51
SF3B3-203ENST00000562874 RNASE12Q5GAN4 147 aaKnown RBP11.87□□□□□ -0.51
SF3B3-203ENST00000562874 SNX29P2Q8IUI4 249 aa11.87□□□□□ -0.51
SF3B3-203ENST00000562874 OR2K2Q8NGT1 345 aa11.87□□□□□ -0.51
SF3B3-203ENST00000562874 SLC25A46Q96AG3 418 aa11.87□□□□□ -0.51
SF3B3-203ENST00000562874 FUNDC2Q9BWH2 189 aa11.87□□□□□ -0.51
SF3B3-203ENST00000562874 PLEKHA2Q9HB19 425 aa11.87□□□□□ -0.51
SF3B3-203ENST00000562874 PALMDQ9NP74 551 aa11.87□□□□□ -0.51
SF3B3-203ENST00000562874 COMMD9Q9P000 198 aa11.87□□□□□ -0.51
SF3B3-203ENST00000562874 NSG2Q9Y328 171 aa11.87□□□□□ -0.51
SF3B3-203ENST00000562874 ZNF785A8K8V0 405 aa11.86□□□□□ -0.51
SF3B3-203ENST00000562874 PGLYRP1O75594 196 aaPredicted RBP11.86□□□□□ -0.51
SF3B3-203ENST00000562874 TPPPO94811 219 aa11.86□□□□□ -0.51
SF3B3-203ENST00000562874 HIST1H1BP16401 226 aaKnown RBP11.86□□□□□ -0.51
SF3B3-203ENST00000562874 NAT1P18440 290 aa11.86□□□□□ -0.51
SF3B3-203ENST00000562874 PRSS3P35030 304 aa11.86□□□□□ -0.51
SF3B3-203ENST00000562874 G6PCP35575 357 aa11.86□□□□□ -0.51
SF3B3-203ENST00000562874 ERVK-16P61578 105 aa11.86□□□□□ -0.51
SF3B3-203ENST00000562874 PHLDA2Q53GA4 152 aa11.86□□□□□ -0.51
SF3B3-203ENST00000562874 FAM209BQ5JX69 171 aa11.86□□□□□ -0.51
SF3B3-203ENST00000562874 UNQ9165/PRO28630Q6UXU0 137 aa11.86□□□□□ -0.51
SF3B3-203ENST00000562874 DEFB125Q8N687 156 aa11.86□□□□□ -0.51
SF3B3-203ENST00000562874 FCAMRQ8WWV6 532 aa11.86□□□□□ -0.51
SF3B3-203ENST00000562874 AIFM2Q9BRQ8 373 aa11.86□□□□□ -0.51
SF3B3-203ENST00000562874 HINT2Q9BX68 163 aa11.86□□□□□ -0.51
SF3B3-203ENST00000562874 QTRT1Q9BXR0 403 aaKnown RBP11.86□□□□□ -0.51
SF3B3-203ENST00000562874 EDA2RQ9HAV5 297 aa11.86□□□□□ -0.51
SF3B3-203ENST00000562874 CEPT1Q9Y6K0 416 aa11.86□□□□□ -0.51
SF3B3-203ENST00000562874 IGHV3-21A0A0B4J1V1 117 aa11.85□□□□□ -0.51
SF3B3-203ENST00000562874 LGALS9O00182 355 aa11.85□□□□□ -0.51
SF3B3-203ENST00000562874 HPGDSO60760 199 aa11.85□□□□□ -0.51
SF3B3-203ENST00000562874 LYL1P12980 280 aa11.85□□□□□ -0.51
SF3B3-203ENST00000562874 F2RP25116 425 aa11.85□□□□□ -0.51
SF3B3-203ENST00000562874 LPAR6P43657 344 aa11.85□□□□□ -0.51
SF3B3-203ENST00000562874 BTNL8Q6UX41 500 aa11.85□□□□□ -0.51
SF3B3-203ENST00000562874 TMEM61Q8N0U2 210 aa11.85□□□□□ -0.51
SF3B3-203ENST00000562874 ISOC1Q96CN7 298 aa11.85□□□□□ -0.51
SF3B3-203ENST00000562874 SRD5A3Q9H8P0 318 aa11.85□□□□□ -0.51
SF3B3-203ENST00000562874 SLC2A8Q9NY64 477 aa11.85□□□□□ -0.51
SF3B3-203ENST00000562874 MLXQ9UH92 298 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms