RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 FANCD2OSQ96PS1 177 aa13.49□□□□□ -0.25
TPM1-218ENST00000559281 SRSF8Q9BRL6 282 aaKnown RBP13.49□□□□□ -0.25
TPM1-218ENST00000559281 ZNF2Q9BSG1 426 aaPredicted RBP13.49□□□□□ -0.25
TPM1-218ENST00000559281 THYN1Q9P016 225 aa13.49□□□□□ -0.25
TPM1-218ENST00000559281 STAB2Q8WWQ8 2551 aa13.48□□□□□ -0.25
TPM1-218ENST00000559281 A0A1B0GW64 132 aa13.48□□□□□ -0.25
TPM1-218ENST00000559281 PPP5D1E7EU14 171 aa13.48□□□□□ -0.25
TPM1-218ENST00000559281 LGALS9O00182 355 aa13.48□□□□□ -0.25
TPM1-218ENST00000559281 UPK2O00526 184 aa13.48□□□□□ -0.25
TPM1-218ENST00000559281 NDUFB8O95169 186 aa13.48□□□□□ -0.25
TPM1-218ENST00000559281 OR2C1O95371 312 aa13.48□□□□□ -0.25
TPM1-218ENST00000559281 PMP2P02689 132 aa13.48□□□□□ -0.25
TPM1-218ENST00000559281 ARL3P36405 182 aa13.48□□□□□ -0.25
TPM1-218ENST00000559281 KLK9Q2XQG4 91 aa13.48□□□□□ -0.25
TPM1-218ENST00000559281 GPHB5Q86YW7 130 aa13.48□□□□□ -0.25
TPM1-218ENST00000559281 LAX1Q8IWV1 398 aa13.48□□□□□ -0.25
TPM1-218ENST00000559281 MUC7Q8TAX7 377 aa13.48□□□□□ -0.25
TPM1-218ENST00000559281 MOB3AQ96BX8 217 aa13.48□□□□□ -0.25
TPM1-218ENST00000559281 CMTM3Q96MX0 182 aa13.48□□□□□ -0.25
TPM1-218ENST00000559281 TM2D3Q9BRN9 247 aa13.48□□□□□ -0.25
TPM1-218ENST00000559281 TECRQ9NZ01 308 aaKnown RBP13.48□□□□□ -0.25
TPM1-218ENST00000559281 COMMD9Q9P000 198 aa13.48□□□□□ -0.25
TPM1-218ENST00000559281 KLK9Q9UKQ9 250 aa13.48□□□□□ -0.25
TPM1-218ENST00000559281 ANAPC10Q9UM13 185 aa13.48□□□□□ -0.25
TPM1-218ENST00000559281 TRBV7-1A0A0A6YYK4 115 aa13.47□□□□□ -0.25
TPM1-218ENST00000559281 PGLYRP1O75594 196 aaPredicted RBP13.47□□□□□ -0.25
TPM1-218ENST00000559281 NAT1P18440 290 aa13.47□□□□□ -0.25
TPM1-218ENST00000559281 F2RP25116 425 aa13.47□□□□□ -0.25
TPM1-218ENST00000559281 S100GP29377 79 aa13.47□□□□□ -0.25
TPM1-218ENST00000559281 OR2B8PP59922 312 aa13.47□□□□□ -0.25
TPM1-218ENST00000559281 THOC7Q6I9Y2 204 aaKnown RBP13.47□□□□□ -0.25
TPM1-218ENST00000559281 CLEC19AQ6UXS0 136 aa13.47□□□□□ -0.25
TPM1-218ENST00000559281 TMEM140Q9NV12 185 aa13.47□□□□□ -0.25
TPM1-218ENST00000559281 SLC2A8Q9NY64 477 aa13.47□□□□□ -0.25
TPM1-218ENST00000559281 COMMD3Q9UBI1 195 aa13.47□□□□□ -0.25
TPM1-218ENST00000559281 DMRT1Q9Y5R6 373 aa13.47□□□□□ -0.25
TPM1-218ENST00000559281 IGHV3-23P01764 117 aa13.46□□□□□ -0.25
TPM1-218ENST00000559281 HLA-AP01891 365 aaKnown RBP13.46□□□□□ -0.25
TPM1-218ENST00000559281 REG1AP05451 166 aa13.46□□□□□ -0.25
TPM1-218ENST00000559281 FOLR2P14207 255 aa13.46□□□□□ -0.25
TPM1-218ENST00000559281 DEFB114Q30KQ6 69 aa13.46□□□□□ -0.25
TPM1-218ENST00000559281 CD300EQ496F6 205 aaPredicted RBP13.46□□□□□ -0.25
TPM1-218ENST00000559281 LPCAT3Q6P1A2 487 aa13.46□□□□□ -0.25
TPM1-218ENST00000559281 C19orf35Q6ZS72 473 aa13.46□□□□□ -0.25
TPM1-218ENST00000559281 HSD17B13Q7Z5P4 300 aaPredicted RBP13.46□□□□□ -0.25
TPM1-218ENST00000559281 THAP7Q9BT49 309 aaPredicted RBP13.46□□□□□ -0.25
TPM1-218ENST00000559281 FUNDC2Q9BWH2 189 aa13.46□□□□□ -0.25
TPM1-218ENST00000559281 QTRT1Q9BXR0 403 aaKnown RBP13.46□□□□□ -0.25
TPM1-218ENST00000559281 IGLV11-55A0A075B6I3 123 aa13.45□□□□□ -0.26
TPM1-218ENST00000559281 ZNF320A2RRD8 509 aa13.45□□□□□ -0.26
TPM1-218ENST00000559281 IZUMO1RA6ND01 250 aa13.45□□□□□ -0.26
TPM1-218ENST00000559281 C2orf70A6NJV1 201 aa13.45□□□□□ -0.26
TPM1-218ENST00000559281 TPPPO94811 219 aa13.45□□□□□ -0.26
TPM1-218ENST00000559281 S1PR2O95136 353 aa13.45□□□□□ -0.26
TPM1-218ENST00000559281 APOA1P02647 267 aa13.45□□□□□ -0.26
TPM1-218ENST00000559281 CLEC3BP05452 202 aa13.45□□□□□ -0.26
TPM1-218ENST00000559281 MYOD1P15172 320 aa13.45□□□□□ -0.26
TPM1-218ENST00000559281 TSPAN5P62079 268 aa13.45□□□□□ -0.26
TPM1-218ENST00000559281 DGCR14Q96DF8 476 aaKnown RBP13.45□□□□□ -0.26
TPM1-218ENST00000559281 CCDC140Q96MF4 163 aa13.45□□□□□ -0.26
TPM1-218ENST00000559281 CITED4Q96RK1 184 aa13.45□□□□□ -0.26
TPM1-218ENST00000559281 SPATA25Q9BR10 227 aa13.45□□□□□ -0.26
TPM1-218ENST00000559281 SCPEP1Q9HB40 452 aa13.45□□□□□ -0.26
TPM1-218ENST00000559281 TRAV3A0A0B4J244 114 aa13.44□□□□□ -0.26
TPM1-218ENST00000559281 IGLC7A0M8Q6 106 aa13.44□□□□□ -0.26
TPM1-218ENST00000559281 CGB1A6NKQ9 187 aa13.44□□□□□ -0.26
TPM1-218ENST00000559281 GPR31O00270 319 aa13.44□□□□□ -0.26
TPM1-218ENST00000559281 SNAPC5O75971 98 aa13.44□□□□□ -0.26
TPM1-218ENST00000559281 RLN1P04808 185 aa13.44□□□□□ -0.26
TPM1-218ENST00000559281 TRAPPC2P0DI81 140 aa13.44□□□□□ -0.26
TPM1-218ENST00000559281 TRAPPC2BP0DI82 140 aa13.44□□□□□ -0.26
TPM1-218ENST00000559281 HLA-DMAP28067 261 aa13.44□□□□□ -0.26
TPM1-218ENST00000559281 HRH1P35367 487 aa13.44□□□□□ -0.26
TPM1-218ENST00000559281 CD81P60033 236 aa13.44□□□□□ -0.26
TPM1-218ENST00000559281 ADAMTSL5Q6ZMM2 481 aa13.44□□□□□ -0.26
TPM1-218ENST00000559281 LYSMD2Q8IV50 215 aa13.44□□□□□ -0.26
TPM1-218ENST00000559281 CADM3Q8N126 398 aa13.44□□□□□ -0.26
TPM1-218ENST00000559281 OR1L8Q8NGR8 309 aa13.44□□□□□ -0.26
TPM1-218ENST00000559281 GPX8Q8TED1 209 aa13.44□□□□□ -0.26
TPM1-218ENST00000559281 S4R3C0 116 aa13.44□□□□□ -0.26
TPM1-218ENST00000559281 MARCH11A6NNE9 402 aa13.43□□□□□ -0.26
TPM1-218ENST00000559281 KRASP01116 189 aa13.43□□□□□ -0.26
TPM1-218ENST00000559281 IFNA6P05013 189 aa13.43□□□□□ -0.26
TPM1-218ENST00000559281 EIF4EP06730 217 aaKnown RBP13.43□□□□□ -0.26
TPM1-218ENST00000559281 LYL1P12980 280 aa13.43□□□□□ -0.26
TPM1-218ENST00000559281 RPA2P15927 270 aa13.43□□□□□ -0.26
TPM1-218ENST00000559281 CBLN1P23435 193 aa13.43□□□□□ -0.26
TPM1-218ENST00000559281 PTBP1P26599 531 aaKnown RBP eCLIP13.43□□□□□ -0.267e-7■■■□□ 17
TPM1-218ENST00000559281 LPAR6P43657 344 aa13.43□□□□□ -0.26
TPM1-218ENST00000559281 RORCP51449 518 aa13.43□□□□□ -0.26
TPM1-218ENST00000559281 VBP1P61758 197 aa13.43□□□□□ -0.26
TPM1-218ENST00000559281 NCS1P62166 190 aa13.43□□□□□ -0.26
TPM1-218ENST00000559281 GUCA2BQ16661 112 aa13.43□□□□□ -0.26
TPM1-218ENST00000559281 HAGHQ16775 308 aa13.43□□□□□ -0.26
TPM1-218ENST00000559281 FCAMRQ8WWV6 532 aa13.43□□□□□ -0.26
TPM1-218ENST00000559281 NEURL2Q9BR09 285 aa13.43□□□□□ -0.26
TPM1-218ENST00000559281 PALMDQ9NP74 551 aa13.43□□□□□ -0.26
TPM1-218ENST00000559281 FKBP11Q9NYL4 201 aa13.43□□□□□ -0.26
TPM1-218ENST00000559281 TEX50A0A1B0GTY4 177 aa13.42□□□□□ -0.26
TPM1-218ENST00000559281 ZNF785A8K8V0 405 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms