RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 PDLIM3Q53GG5 364 aaPredicted RBP9.91□□□□□ -0.82
TPM1-209ENST00000558072 TCTE3Q8IZS6 198 aa9.91□□□□□ -0.82
TPM1-209ENST00000558072 OR4D5Q8NGN0 318 aa9.91□□□□□ -0.82
TPM1-209ENST00000558072 THAP6Q8TBB0 222 aa9.91□□□□□ -0.82
TPM1-209ENST00000558072 OR10C1Q96KK4 312 aa9.91□□□□□ -0.82
TPM1-209ENST00000558072 RAB40CQ96S21 281 aa9.91□□□□□ -0.82
TPM1-209ENST00000558072 HIPK2Q9H2X6 1198 aa9.91□□□□□ -0.82
TPM1-209ENST00000558072 OR51B2Q9Y5P1 312 aa9.91□□□□□ -0.82
TPM1-209ENST00000558072 F8P00451 2351 aa9.9□□□□□ -0.82
TPM1-209ENST00000558072 L7N2F9 121 aa9.9□□□□□ -0.82
TPM1-209ENST00000558072 CCSO14618 274 aa9.9□□□□□ -0.82
TPM1-209ENST00000558072 CYB5BO43169 146 aa9.9□□□□□ -0.82
TPM1-209ENST00000558072 CNIH1O95406 144 aa9.9□□□□□ -0.82
TPM1-209ENST00000558072 CXCL3P19876 107 aa9.9□□□□□ -0.82
TPM1-209ENST00000558072 NUP62P37198 522 aaPredicted RBP9.9□□□□□ -0.82
TPM1-209ENST00000558072 H2BFSP57053 126 aa9.9□□□□□ -0.82
TPM1-209ENST00000558072 TAS2R30P59541 319 aa9.9□□□□□ -0.82
TPM1-209ENST00000558072 VAMP2P63027 116 aa9.9□□□□□ -0.82
TPM1-209ENST00000558072 ERHP84090 104 aaKnown RBP9.9□□□□□ -0.82
TPM1-209ENST00000558072 SRSF2Q01130 221 aaKnown RBP9.9□□□□□ -0.82
TPM1-209ENST00000558072 CD83Q01151 205 aa9.9□□□□□ -0.82
TPM1-209ENST00000558072 ID3Q02535 119 aa9.9□□□□□ -0.82
TPM1-209ENST00000558072 TNFRSF9Q07011 255 aa9.9□□□□□ -0.82
TPM1-209ENST00000558072 VKORC1L1Q8N0U8 176 aa9.9□□□□□ -0.82
TPM1-209ENST00000558072 FAM71E2Q8N5Q1 922 aa9.9□□□□□ -0.82
TPM1-209ENST00000558072 PIFOQ8TCI5 191 aa9.9□□□□□ -0.82
TPM1-209ENST00000558072 ZNF48Q96MX3 618 aaPredicted RBP9.9□□□□□ -0.82
TPM1-209ENST00000558072 CHIAQ9BZP6 476 aa9.9□□□□□ -0.82
TPM1-209ENST00000558072 NPFFR1Q9GZQ6 430 aa9.9□□□□□ -0.82
TPM1-209ENST00000558072 FBXL15Q9H469 300 aa9.9□□□□□ -0.82
TPM1-209ENST00000558072 PLSCR3Q9NRY6 295 aa9.9□□□□□ -0.82
TPM1-209ENST00000558072 HSPB7Q9UBY9 170 aa9.9□□□□□ -0.82
TPM1-209ENST00000558072 A0A1B0GVG6 124 aa9.89□□□□□ -0.83
TPM1-209ENST00000558072 CEBPZOSA8MTT3 80 aa9.89□□□□□ -0.83
TPM1-209ENST00000558072 INS-IGF2F8WCM5 200 aa9.89□□□□□ -0.83
TPM1-209ENST00000558072 SYNGR2O43760 224 aa9.89□□□□□ -0.83
TPM1-209ENST00000558072 OR9G9P0C7N8 305 aa9.89□□□□□ -0.83
TPM1-209ENST00000558072 CD24P25063 80 aa9.89□□□□□ -0.83
TPM1-209ENST00000558072 RPL27AP46776 148 aaKnown RBP9.89□□□□□ -0.83
TPM1-209ENST00000558072 SUB1P53999 127 aaKnown RBP eCLIP9.89□□□□□ -0.83
TPM1-209ENST00000558072 RPL23AP62750 156 aaKnown RBP9.89□□□□□ -0.83
TPM1-209ENST00000558072 TMEM267Q0VDI3 215 aaPredicted RBP9.89□□□□□ -0.83
TPM1-209ENST00000558072 SIGLECL1Q8N7X8 197 aa9.89□□□□□ -0.83
TPM1-209ENST00000558072 Q8N9W7 124 aa9.89□□□□□ -0.83
TPM1-209ENST00000558072 OR1L6Q8NGR2 347 aa9.89□□□□□ -0.83
TPM1-209ENST00000558072 OR2T35Q8NGX2 323 aa9.89□□□□□ -0.83
TPM1-209ENST00000558072 PPP1R1CQ8WVI7 109 aa9.89□□□□□ -0.83
TPM1-209ENST00000558072 QTRT1Q9BXR0 403 aaKnown RBP9.89□□□□□ -0.83
TPM1-209ENST00000558072 ZNF430Q9H8G1 570 aaPredicted RBP9.89□□□□□ -0.83
TPM1-209ENST00000558072 PLEKHA3Q9HB20 300 aa9.89□□□□□ -0.83
TPM1-209ENST00000558072 E5RGE8 158 aa9.88□□□□□ -0.83
TPM1-209ENST00000558072 HOXA3O43365 443 aaPredicted RBP9.88□□□□□ -0.83
TPM1-209ENST00000558072 CRLF1O75462 422 aa9.88□□□□□ -0.83
TPM1-209ENST00000558072 SIX6O95475 246 aa9.88□□□□□ -0.83
TPM1-209ENST00000558072 SCGB1D2O95969 90 aa9.88□□□□□ -0.83
TPM1-209ENST00000558072 IGHV4-59P01825 116 aa9.88□□□□□ -0.83
TPM1-209ENST00000558072 CRYBA1P05813 215 aa9.88□□□□□ -0.83
TPM1-209ENST00000558072 PRCDQ00LT1 54 aa9.88□□□□□ -0.83
TPM1-209ENST00000558072 IL15RAQ13261 267 aa9.88□□□□□ -0.83
TPM1-209ENST00000558072 TNXAQ16473 311 aa9.88□□□□□ -0.83
TPM1-209ENST00000558072 C2orf68Q2NKX9 166 aa9.88□□□□□ -0.83
TPM1-209ENST00000558072 Q6ZRM9 215 aa9.88□□□□□ -0.83
TPM1-209ENST00000558072 C5orf56Q8N8D9 126 aa9.88□□□□□ -0.83
TPM1-209ENST00000558072 DUX5Q96PT3 197 aa9.88□□□□□ -0.83
TPM1-209ENST00000558072 GON7Q9BXV9 100 aa9.88□□□□□ -0.83
TPM1-209ENST00000558072 PRSS22Q9GZN4 317 aa9.88□□□□□ -0.83
TPM1-209ENST00000558072 TNFRSF19Q9NS68 423 aa9.88□□□□□ -0.83
TPM1-209ENST00000558072 NSG2Q9Y328 171 aa9.88□□□□□ -0.83
TPM1-209ENST00000558072 WSB1Q9Y6I7 421 aa9.88□□□□□ -0.83
TPM1-209ENST00000558072 U3KQ87 197 aa9.88□□□□□ -0.83
TPM1-209ENST00000558072 TLN2Q9Y4G6 2542 aa9.87□□□□□ -0.83
TPM1-209ENST00000558072 A0A0G2JRQ6 117 aa9.87□□□□□ -0.83
TPM1-209ENST00000558072 TEX50A0A1B0GTY4 177 aa9.87□□□□□ -0.83
TPM1-209ENST00000558072 MPTX1A8MV57 137 aa9.87□□□□□ -0.83
TPM1-209ENST00000558072 TRIM77I1YAP6 450 aa9.87□□□□□ -0.83
TPM1-209ENST00000558072 MPC2O95563 127 aa9.87□□□□□ -0.83
TPM1-209ENST00000558072 CA2P00918 260 aa9.87□□□□□ -0.83
TPM1-209ENST00000558072 MBPP02686 304 aaPredicted RBP9.87□□□□□ -0.83
TPM1-209ENST00000558072 SLC25A4P12235 298 aa9.87□□□□□ -0.83
TPM1-209ENST00000558072 C4BPBP20851 252 aa9.87□□□□□ -0.83
TPM1-209ENST00000558072 HOXA1P49639 335 aaPredicted RBP9.87□□□□□ -0.83
TPM1-209ENST00000558072 S100A10P60903 97 aa9.87□□□□□ -0.83
TPM1-209ENST00000558072 FXYD3Q14802 87 aa9.87□□□□□ -0.83
TPM1-209ENST00000558072 LY6EQ16553 131 aa9.87□□□□□ -0.83
TPM1-209ENST00000558072 PRSS54Q6PEW0 395 aa9.87□□□□□ -0.83
TPM1-209ENST00000558072 DTD1Q8TEA8 209 aa9.87□□□□□ -0.83
TPM1-209ENST00000558072 ARPC1AQ92747 370 aa9.87□□□□□ -0.83
TPM1-209ENST00000558072 RITA1Q96K30 269 aa9.87□□□□□ -0.83
TPM1-209ENST00000558072 HYLS1Q96M11 299 aa9.87□□□□□ -0.83
TPM1-209ENST00000558072 SLC25A31Q9H0C2 315 aa9.87□□□□□ -0.83
TPM1-209ENST00000558072 RANGRFQ9HD47 186 aaPredicted RBP9.87□□□□□ -0.83
TPM1-209ENST00000558072 NDUFA4L2Q9NRX3 87 aa9.87□□□□□ -0.83
TPM1-209ENST00000558072 ZNF580Q9UK33 172 aa9.87□□□□□ -0.83
TPM1-209ENST00000558072 K7EPK0 472 aa9.86□□□□□ -0.83
TPM1-209ENST00000558072 MAST4O15021 2626 aa9.86□□□□□ -0.83
TPM1-209ENST00000558072 TCF21O43680 179 aa9.86□□□□□ -0.83
TPM1-209ENST00000558072 TSC22D2O75157 780 aa9.86□□□□□ -0.83
TPM1-209ENST00000558072 DEDDO75618 318 aa9.86□□□□□ -0.83
TPM1-209ENST00000558072 CNTFRP26992 372 aa9.86□□□□□ -0.83
TPM1-209ENST00000558072 SNCAP37840 140 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms