RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 TXNL4BQ9NX01 149 aaKnown RBP11.9□□□□□ -0.5
SCFD1-224ENST00000557713 BLOC1S6Q9UL45 172 aa11.9□□□□□ -0.5
SCFD1-224ENST00000557713 DEFA4P12838 97 aa11.89□□□□□ -0.51
SCFD1-224ENST00000557713 OR2B8PP59922 312 aa11.89□□□□□ -0.51
SCFD1-224ENST00000557713 TIMM50Q3ZCQ8 353 aa11.89□□□□□ -0.51
SCFD1-224ENST00000557713 BTNL8Q6UX41 500 aa11.89□□□□□ -0.51
SCFD1-224ENST00000557713 LINC00476Q8WZB0 136 aa11.89□□□□□ -0.51
SCFD1-224ENST00000557713 MARC2Q969Z3 335 aa11.89□□□□□ -0.51
SCFD1-224ENST00000557713 CNBD2Q96M20 576 aa11.89□□□□□ -0.51
SCFD1-224ENST00000557713 AIFM2Q9BRQ8 373 aa11.89□□□□□ -0.51
SCFD1-224ENST00000557713 MRPL27Q9P0M9 148 aaKnown RBP11.89□□□□□ -0.51
SCFD1-224ENST00000557713 TNFSF12O43508 249 aa11.88□□□□□ -0.51
SCFD1-224ENST00000557713 PTHLHP12272 177 aa11.88□□□□□ -0.51
SCFD1-224ENST00000557713 FCGR2CP31995 323 aa11.88□□□□□ -0.51
SCFD1-224ENST00000557713 ELLP55199 621 aaPredicted RBP11.88□□□□□ -0.51
SCFD1-224ENST00000557713 ZNF585BQ52M93 769 aa11.88□□□□□ -0.51
SCFD1-224ENST00000557713 UBE2UQ5VVX9 321 aa11.88□□□□□ -0.51
SCFD1-224ENST00000557713 ZNF773Q6PK81 442 aa11.88□□□□□ -0.51
SCFD1-224ENST00000557713 TPRA1Q86W33 373 aa11.88□□□□□ -0.51
SCFD1-224ENST00000557713 WFDC3Q8IUB2 231 aa11.88□□□□□ -0.51
SCFD1-224ENST00000557713 SPAG16Q8N0X2 631 aa11.88□□□□□ -0.51
SCFD1-224ENST00000557713 ZBTB34Q8NCN2 500 aa11.88□□□□□ -0.51
SCFD1-224ENST00000557713 ZNF502Q8TBZ5 544 aa11.88□□□□□ -0.51
SCFD1-224ENST00000557713 DAPK2Q9UIK4 370 aa11.88□□□□□ -0.51
SCFD1-224ENST00000557713 TRAV3A0A0B4J244 114 aa11.87□□□□□ -0.51
SCFD1-224ENST00000557713 IGLC7A0M8Q6 106 aa11.87□□□□□ -0.51
SCFD1-224ENST00000557713 UPK2O00526 184 aa11.87□□□□□ -0.51
SCFD1-224ENST00000557713 RBFOX2O43251 390 aaKnown RBP eCLIP11.87□□□□□ -0.51
SCFD1-224ENST00000557713 PTBP1P26599 531 aaKnown RBP eCLIP11.87□□□□□ -0.51
SCFD1-224ENST00000557713 TAS2R31P59538 309 aa11.87□□□□□ -0.51
SCFD1-224ENST00000557713 EWSR1Q01844 656 aaKnown RBP eCLIP11.87□□□□□ -0.51
SCFD1-224ENST00000557713 POU2AF1Q16633 256 aa11.87□□□□□ -0.51
SCFD1-224ENST00000557713 IZUMO2Q6UXV1 221 aa11.87□□□□□ -0.51
SCFD1-224ENST00000557713 RBPMS2Q6ZRY4 209 aaKnown RBP11.87□□□□□ -0.51
SCFD1-224ENST00000557713 OR2C3Q8N628 320 aa11.87□□□□□ -0.51
SCFD1-224ENST00000557713 BEST4Q8NFU0 473 aa11.87□□□□□ -0.51
SCFD1-224ENST00000557713 OR1L6Q8NGR2 347 aa11.87□□□□□ -0.51
SCFD1-224ENST00000557713 LGALS14Q8TCE9 139 aa11.87□□□□□ -0.51
SCFD1-224ENST00000557713 SECTM1Q8WVN6 248 aa11.87□□□□□ -0.51
SCFD1-224ENST00000557713 ZNF436Q9C0F3 470 aaPredicted RBP11.87□□□□□ -0.51
SCFD1-224ENST00000557713 HRASLSQ9HDD0 168 aa11.87□□□□□ -0.51
SCFD1-224ENST00000557713 RHBDL2Q9NX52 303 aa11.87□□□□□ -0.51
SCFD1-224ENST00000557713 RRP15Q9Y3B9 282 aaKnown RBP11.87□□□□□ -0.51
SCFD1-224ENST00000557713 UFC1Q9Y3C8 167 aa11.87□□□□□ -0.51
SCFD1-224ENST00000557713 MRPS14O60783 128 aaKnown RBP11.86□□□□□ -0.51
SCFD1-224ENST00000557713 HPRT1P00492 218 aa11.86□□□□□ -0.51
SCFD1-224ENST00000557713 GPR183P32249 361 aa11.86□□□□□ -0.51
SCFD1-224ENST00000557713 HSPA13P48723 471 aa11.86□□□□□ -0.51
SCFD1-224ENST00000557713 ARPC4P59998 168 aa11.86□□□□□ -0.51
SCFD1-224ENST00000557713 SFXN4Q6P4A7 337 aa11.86□□□□□ -0.51
SCFD1-224ENST00000557713 PLET1Q6UQ28 207 aa11.86□□□□□ -0.51
SCFD1-224ENST00000557713 HOGA1Q86XE5 327 aa11.86□□□□□ -0.51
SCFD1-224ENST00000557713 GVQW1Q8N7I0 195 aa11.86□□□□□ -0.51
SCFD1-224ENST00000557713 OR13F1Q8NGS4 319 aa11.86□□□□□ -0.51
SCFD1-224ENST00000557713 SRSF8Q9BRL6 282 aaKnown RBP11.86□□□□□ -0.51
SCFD1-224ENST00000557713 C5orf66Q9H5L9 145 aa11.86□□□□□ -0.51
SCFD1-224ENST00000557713 TP53TG1Q9Y2A0 90 aa11.86□□□□□ -0.51
SCFD1-224ENST00000557713 TRAV18A0A075B6X5 111 aa11.85□□□□□ -0.51
SCFD1-224ENST00000557713 IGHV3-35A0A0C4DH35 117 aa11.85□□□□□ -0.51
SCFD1-224ENST00000557713 A0A0J9YWU9 116 aa11.85□□□□□ -0.51
SCFD1-224ENST00000557713 SULT1C2O00338 296 aa11.85□□□□□ -0.51
SCFD1-224ENST00000557713 PPYP01298 95 aa11.85□□□□□ -0.51
SCFD1-224ENST00000557713 FGF2P09038 288 aa11.85□□□□□ -0.51
SCFD1-224ENST00000557713 NQO2P16083 231 aa11.85□□□□□ -0.51
SCFD1-224ENST00000557713 GABARAPL2P60520 117 aa11.85□□□□□ -0.51
SCFD1-224ENST00000557713 TNFRSF9Q07011 255 aa11.85□□□□□ -0.51
SCFD1-224ENST00000557713 Q6ZWC4 215 aa11.85□□□□□ -0.51
SCFD1-224ENST00000557713 OR10W1Q8NGF6 305 aa11.85□□□□□ -0.51
SCFD1-224ENST00000557713 VN1R17PQ8TDU5 208 aa11.85□□□□□ -0.51
SCFD1-224ENST00000557713 SPAG8Q99932 426 aaPredicted RBP11.85□□□□□ -0.51
SCFD1-224ENST00000557713 COMMD5Q9GZQ3 224 aa11.85□□□□□ -0.51
SCFD1-224ENST00000557713 SLC5A7Q9GZV3 580 aa11.85□□□□□ -0.51
SCFD1-224ENST00000557713 VCX3BQ9H321 246 aa11.85□□□□□ -0.51
SCFD1-224ENST00000557713 THYN1Q9P016 225 aa11.85□□□□□ -0.51
SCFD1-224ENST00000557713 CXorf65A6NEN9 183 aa11.84□□□□□ -0.51
SCFD1-224ENST00000557713 TGOLN2O43493 480 aa11.84□□□□□ -0.51
SCFD1-224ENST00000557713 SPRY2O43597 315 aa11.84□□□□□ -0.51
SCFD1-224ENST00000557713 LY6G6CO95867 125 aa11.84□□□□□ -0.51
SCFD1-224ENST00000557713 PMS2P11Q13670 270 aa11.84□□□□□ -0.51
SCFD1-224ENST00000557713 LYG2Q86SG7 212 aa11.84□□□□□ -0.51
SCFD1-224ENST00000557713 SLC38A6Q8IZM9 456 aa11.84□□□□□ -0.51
SCFD1-224ENST00000557713 SPARTQ8N0X7 666 aa11.84□□□□□ -0.51
SCFD1-224ENST00000557713 OR5H6Q8NGV6 325 aa11.84□□□□□ -0.51
SCFD1-224ENST00000557713 GIMAP1Q8WWP7 306 aa11.84□□□□□ -0.51
SCFD1-224ENST00000557713 TMEM190Q8WZ59 177 aa11.84□□□□□ -0.51
SCFD1-224ENST00000557713 SLC25A38Q96DW6 304 aa11.84□□□□□ -0.51
SCFD1-224ENST00000557713 TEX50A0A1B0GTY4 177 aa11.83□□□□□ -0.52
SCFD1-224ENST00000557713 UBE2CO00762 179 aa11.83□□□□□ -0.52
SCFD1-224ENST00000557713 TSPAN4O14817 238 aa11.83□□□□□ -0.52
SCFD1-224ENST00000557713 SERPINE2P07093 398 aa11.83□□□□□ -0.52
SCFD1-224ENST00000557713 CLEC2LP0C7M8 214 aa11.83□□□□□ -0.52
SCFD1-224ENST00000557713 PSMB9P28065 219 aa11.83□□□□□ -0.52
SCFD1-224ENST00000557713 SDC2P34741 201 aa11.83□□□□□ -0.52
SCFD1-224ENST00000557713 BMI1P35226 326 aa11.83□□□□□ -0.52
SCFD1-224ENST00000557713 APOC4P55056 127 aa11.83□□□□□ -0.52
SCFD1-224ENST00000557713 SCAND1P57086 179 aa11.83□□□□□ -0.52
SCFD1-224ENST00000557713 CATR1Q13166 79 aa11.83□□□□□ -0.52
SCFD1-224ENST00000557713 CEMP1Q6PRD7 247 aaPredicted RBP11.83□□□□□ -0.52
SCFD1-224ENST00000557713 ZNF818PQ6ZRF7 136 aa11.83□□□□□ -0.52
SCFD1-224ENST00000557713 QTRT1Q9BXR0 403 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms